Guide to the Human Genome
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Name: ARFGEF2 Sequence: fasta or formatted (1785aa) NCBI GI: 150417986
Description:

ADP-ribosylation factor guanine nucleotide-exchange factor 2

Referenced in:

ADP-Ribosylation Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1        126           3
 C cysteine            2.5         44           2
 D aspartate           5.3         94           2
 E glutamate           7.5        134           2
 F phenylalanine       4.5         81           2
 G glycine             4.6         82           2
 H histidine           2.5         45           2
 I isoleucine          6.2        110           2
 K lysine              6.2        110           2
 L leucine            10.0        179           6
 M methionine          2.7         49           1
 N asparagine          3.9         69           1
 P proline             3.4         60           2
 Q glutamine           5.8        104           2
 R arginine            5.0         89           2
 S serine              7.8        139           3
 T threonine           5.5         99           3
 V valine              6.2        110           3
 W tryptophan          1.2         22           2
 Y tyrosine            2.2         39           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADP-ribosylation factor guanine nucleotide-exchange... 
ARFGEF1               0.744   brefeldin A-inhibited guanine nucleotide-exchange pr...
GBF1                  0.066   golgi-specific brefeldin A resistant guanine nucleoti...
CYTH1                 0.048   cytohesin 1 isoform 2 
CYTH1                 0.048   cytohesin 1 isoform 1 
CYTH3                 0.046   cytohesin 3 
CYTH2                 0.044   cytohesin 2 isoform 2 
CYTH2                 0.044   cytohesin 2 isoform 1 
CYTH4                 0.042   cytohesin 4 
IQSEC1                0.036   IQ motif and Sec7 domain 1 isoform a 
IQSEC1                0.036   IQ motif and Sec7 domain 1 isoform b 
IQSEC3                0.035   IQ motif and Sec7 domain 3 
IQSEC2                0.035   IQ motif and Sec7 domain 2 isoform 2 
IQSEC2                0.035   IQ motif and Sec7 domain 2 isoform1 
KIAA1244              0.019   brefeldin A-inhibited guanine nucleotide-exchange p...
PSD3                  0.018   ADP-ribosylation factor guanine nucleotide factor 6 ...
PSD3                  0.018   ADP-ribosylation factor guanine nucleotide factor 6...
PSD4                  0.018   pleckstrin and Sec7 domain containing 4 
FBXO8                 0.018   F-box only protein 8 
PSD2                  0.017   pleckstrin and Sec7 domain containing 2 
PSD                   0.016   pleckstrin and Sec7 domain containing 
MON2                  0.015   MON2 homolog 
CSRNP1                0.003   AXIN1 up-regulated 1 
SMC3                  0.003   structural maintenance of chromosomes 3 
MYH10                 0.003   myosin, heavy polypeptide 10, non-muscle 
TFEC                  0.003   transcription factor EC isoform a 
TMEM169               0.002   transmembrane protein 169 
TMEM169               0.002   transmembrane protein 169 
TMEM169               0.002   transmembrane protein 169 
TMEM169               0.002   transmembrane protein 169 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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