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Search of human proteins with 56788407
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|56788407 mitogen-activated protein kinase associated protein
1 isoform 1 [Homo sapiens]
(522 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|56788407 mitogen-activated protein kinase associated protein ... 1041 0.0
gi|13129138 mitogen-activated protein kinase associated protein ... 951 0.0
gi|56788405 mitogen-activated protein kinase associated protein ... 921 0.0
gi|56788403 mitogen-activated protein kinase associated protein ... 655 0.0
gi|56788399 mitogen-activated protein kinase associated protein ... 655 0.0
gi|56788401 mitogen-activated protein kinase associated protein ... 643 0.0
gi|31377611 coiled-coil domain containing 148 [Homo sapiens] 33 0.49
gi|41152097 DNA segment on chromosome X and Y (unique) 155 expre... 33 0.49
gi|11342676 thyroid hormone receptor interactor 10 [Homo sapiens] 33 0.63
gi|115527060 clathrin, light polypeptide A isoform c [Homo sapiens] 31 2.4
gi|4502899 clathrin, light polypeptide A isoform a [Homo sapiens] 31 2.4
gi|6005993 clathrin, light polypeptide A isoform b [Homo sapiens] 31 2.4
gi|148746195 trichohyalin [Homo sapiens] 31 3.1
gi|221139761 zinc finger protein 853 [Homo sapiens] 30 4.1
gi|110349719 titin isoform N2-A [Homo sapiens] 30 5.4
gi|7661952 squamous cell carcinoma antigen recognized by T cells... 30 5.4
gi|189491759 p21-activated kinase 3 isoform d [Homo sapiens] 30 5.4
gi|189491757 p21-activated kinase 3 isoform c [Homo sapiens] 30 5.4
gi|189491755 p21-activated kinase 3 isoform b [Homo sapiens] 30 5.4
gi|189491753 p21-activated kinase 3 isoform a [Homo sapiens] 30 5.4
gi|189491751 p21-activated kinase 3 isoform a [Homo sapiens] 30 5.4
gi|4505601 p21-activated kinase 3 isoform a [Homo sapiens] 30 5.4
gi|190014625 DIS3 mitotic control isoform b [Homo sapiens] 30 5.4
gi|190014623 DIS3 mitotic control isoform a [Homo sapiens] 30 5.4
gi|15149465 caldesmon 1 isoform 5 [Homo sapiens] 30 5.4
gi|15149463 caldesmon 1 isoform 4 [Homo sapiens] 30 5.4
gi|15149467 caldesmon 1 isoform 3 [Homo sapiens] 30 5.4
gi|4826657 caldesmon 1 isoform 2 [Homo sapiens] 30 5.4
gi|44680105 caldesmon 1 isoform 1 [Homo sapiens] 30 5.4
gi|4505101 microtubule-associated protein 7 [Homo sapiens] 30 5.4
>gi|56788407 mitogen-activated protein kinase associated protein 1
isoform 1 [Homo sapiens]
Length = 522
Score = 1041 bits (2693), Expect = 0.0
Identities = 522/522 (100%), Positives = 522/522 (100%)
Query: 1 MAFLDNPTIILAHIRQSHVTSDDTGMCEMVLIDHDVDLEKIHPPSMPGDSGSEIQGSNGE 60
MAFLDNPTIILAHIRQSHVTSDDTGMCEMVLIDHDVDLEKIHPPSMPGDSGSEIQGSNGE
Sbjct: 1 MAFLDNPTIILAHIRQSHVTSDDTGMCEMVLIDHDVDLEKIHPPSMPGDSGSEIQGSNGE 60
Query: 61 TQGYVYAQSVDITSSWDFGIRRRSNTAQRLERLRKERQNQIKCKNIQWKERNSKQSAQEL 120
TQGYVYAQSVDITSSWDFGIRRRSNTAQRLERLRKERQNQIKCKNIQWKERNSKQSAQEL
Sbjct: 61 TQGYVYAQSVDITSSWDFGIRRRSNTAQRLERLRKERQNQIKCKNIQWKERNSKQSAQEL 120
Query: 121 KSLFEKKSLKEKPPISGKQSILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVY 180
KSLFEKKSLKEKPPISGKQSILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVY
Sbjct: 121 KSLFEKKSLKEKPPISGKQSILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVY 180
Query: 181 LPLHSSQDRLLPMTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGE 240
LPLHSSQDRLLPMTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGE
Sbjct: 181 LPLHSSQDRLLPMTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGE 240
Query: 241 VDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVT 300
VDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVT
Sbjct: 241 VDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVT 300
Query: 301 MKEILLKAVKRRKGSQKVSGPQYRLEKQSEPNVAVDLDSTLESQSAWEFCLVRENSSRAD 360
MKEILLKAVKRRKGSQKVSGPQYRLEKQSEPNVAVDLDSTLESQSAWEFCLVRENSSRAD
Sbjct: 301 MKEILLKAVKRRKGSQKVSGPQYRLEKQSEPNVAVDLDSTLESQSAWEFCLVRENSSRAD 360
Query: 361 GVFEEDSQIDIATVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKAS 420
GVFEEDSQIDIATVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKAS
Sbjct: 361 GVFEEDSQIDIATVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKAS 420
Query: 421 TKFWIKQKPISIDSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVL 480
TKFWIKQKPISIDSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVL
Sbjct: 421 TKFWIKQKPISIDSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVL 480
Query: 481 KVNYILESRASTARADYFAQKQRKLNRRTSFSFQKEKKSGQQ 522
KVNYILESRASTARADYFAQKQRKLNRRTSFSFQKEKKSGQQ
Sbjct: 481 KVNYILESRASTARADYFAQKQRKLNRRTSFSFQKEKKSGQQ 522
>gi|13129138 mitogen-activated protein kinase associated protein 1
isoform 2 [Homo sapiens]
Length = 486
Score = 951 bits (2459), Expect = 0.0
Identities = 486/522 (93%), Positives = 486/522 (93%), Gaps = 36/522 (6%)
Query: 1 MAFLDNPTIILAHIRQSHVTSDDTGMCEMVLIDHDVDLEKIHPPSMPGDSGSEIQGSNGE 60
MAFLDNPTIILAHIRQSHVTSDDTGMCEMVLIDHDVDLEKIHPPSMPGDSGSEIQGSNGE
Sbjct: 1 MAFLDNPTIILAHIRQSHVTSDDTGMCEMVLIDHDVDLEKIHPPSMPGDSGSEIQGSNGE 60
Query: 61 TQGYVYAQSVDITSSWDFGIRRRSNTAQRLERLRKERQNQIKCKNIQWKERNSKQSAQEL 120
TQGYVYAQSVDITSSWDFGIRRRSNTAQRLERLRKERQNQIKCKNIQWKERNSKQSAQEL
Sbjct: 61 TQGYVYAQSVDITSSWDFGIRRRSNTAQRLERLRKERQNQIKCKNIQWKERNSKQSAQEL 120
Query: 121 KSLFEKKSLKEKPPISGKQSILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVY 180
KSLFEKKSLKEKPPISGKQSILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVY
Sbjct: 121 KSLFEKKSLKEKPPISGKQSILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVY 180
Query: 181 LPLHSSQDRLLPMTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGE 240
LPLHSSQDRLLPMTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGE
Sbjct: 181 LPLHSSQDRLLPMTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGE 240
Query: 241 VDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVT 300
VDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVT
Sbjct: 241 VDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVT 300
Query: 301 MKEILLKAVKRRKGSQKVSGPQYRLEKQSEPNVAVDLDSTLESQSAWEFCLVRENSSRAD 360
MKEILLKAVKRRKGSQKVSG SRAD
Sbjct: 301 MKEILLKAVKRRKGSQKVSG------------------------------------SRAD 324
Query: 361 GVFEEDSQIDIATVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKAS 420
GVFEEDSQIDIATVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKAS
Sbjct: 325 GVFEEDSQIDIATVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKAS 384
Query: 421 TKFWIKQKPISIDSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVL 480
TKFWIKQKPISIDSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVL
Sbjct: 385 TKFWIKQKPISIDSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVL 444
Query: 481 KVNYILESRASTARADYFAQKQRKLNRRTSFSFQKEKKSGQQ 522
KVNYILESRASTARADYFAQKQRKLNRRTSFSFQKEKKSGQQ
Sbjct: 445 KVNYILESRASTARADYFAQKQRKLNRRTSFSFQKEKKSGQQ 486
>gi|56788405 mitogen-activated protein kinase associated protein 1
isoform 3 [Homo sapiens]
Length = 475
Score = 921 bits (2380), Expect = 0.0
Identities = 472/522 (90%), Positives = 472/522 (90%), Gaps = 47/522 (9%)
Query: 1 MAFLDNPTIILAHIRQSHVTSDDTGMCEMVLIDHDVDLEKIHPPSMPGDSGSEIQGSNGE 60
MAFLDNPTIILAHIRQSHVTSDDTGMCEMVLIDHDVDLEKIHPPSMPGDSGSEIQGSNGE
Sbjct: 1 MAFLDNPTIILAHIRQSHVTSDDTGMCEMVLIDHDVDLEKIHPPSMPGDSGSEIQGSNGE 60
Query: 61 TQGYVYAQSVDITSSWDFGIRRRSNTAQRLERLRKERQNQIKCKNIQWKERNSKQSAQEL 120
TQGYVYAQSVDITSSWDFGIRRRSNTAQRLERLRKERQNQIKCKNIQWKERNSKQSAQEL
Sbjct: 61 TQGYVYAQSVDITSSWDFGIRRRSNTAQRLERLRKERQNQIKCKNIQWKERNSKQSAQEL 120
Query: 121 KSLFEKKSLKEKPPISGKQSILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVY 180
KSLFEKKSLKEKPPISGKQSILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVY
Sbjct: 121 KSLFEKKSLKEKPPISGKQSILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVY 180
Query: 181 LPLHSSQDRLLPMTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGE 240
LPLHSSQDRLLPMTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGE
Sbjct: 181 LPLHSSQDRLLPMTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGE 240
Query: 241 VDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVT 300
VDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVT
Sbjct: 241 VDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVT 300
Query: 301 MKEILLKAVKRRKGSQKVSGPQYRLEKQSEPNVAVDLDSTLESQSAWEFCLVRENSSRAD 360
MKEILLKAVKRRKGSQKVSGPQYRLEKQSEPNVAVDLDSTLESQSAWEFCLVRENS D
Sbjct: 301 MKEILLKAVKRRKGSQKVSGPQYRLEKQSEPNVAVDLDSTLESQSAWEFCLVRENSISGD 360
Query: 361 GVFEEDSQIDIATVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKAS 420
KVEIDPVTNQKAS
Sbjct: 361 -----------------------------------------------KVEIDPVTNQKAS 373
Query: 421 TKFWIKQKPISIDSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVL 480
TKFWIKQKPISIDSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVL
Sbjct: 374 TKFWIKQKPISIDSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVL 433
Query: 481 KVNYILESRASTARADYFAQKQRKLNRRTSFSFQKEKKSGQQ 522
KVNYILESRASTARADYFAQKQRKLNRRTSFSFQKEKKSGQQ
Sbjct: 434 KVNYILESRASTARADYFAQKQRKLNRRTSFSFQKEKKSGQQ 475
>gi|56788403 mitogen-activated protein kinase associated protein 1
isoform 4 [Homo sapiens]
Length = 330
Score = 655 bits (1690), Expect = 0.0
Identities = 330/330 (100%), Positives = 330/330 (100%)
Query: 193 MTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNE 252
MTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNE
Sbjct: 1 MTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNE 60
Query: 253 PIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVTMKEILLKAVKRR 312
PIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVTMKEILLKAVKRR
Sbjct: 61 PIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVTMKEILLKAVKRR 120
Query: 313 KGSQKVSGPQYRLEKQSEPNVAVDLDSTLESQSAWEFCLVRENSSRADGVFEEDSQIDIA 372
KGSQKVSGPQYRLEKQSEPNVAVDLDSTLESQSAWEFCLVRENSSRADGVFEEDSQIDIA
Sbjct: 121 KGSQKVSGPQYRLEKQSEPNVAVDLDSTLESQSAWEFCLVRENSSRADGVFEEDSQIDIA 180
Query: 373 TVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISI 432
TVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISI
Sbjct: 181 TVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISI 240
Query: 433 DSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRAST 492
DSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRAST
Sbjct: 241 DSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRAST 300
Query: 493 ARADYFAQKQRKLNRRTSFSFQKEKKSGQQ 522
ARADYFAQKQRKLNRRTSFSFQKEKKSGQQ
Sbjct: 301 ARADYFAQKQRKLNRRTSFSFQKEKKSGQQ 330
>gi|56788399 mitogen-activated protein kinase associated protein 1
isoform 4 [Homo sapiens]
Length = 330
Score = 655 bits (1690), Expect = 0.0
Identities = 330/330 (100%), Positives = 330/330 (100%)
Query: 193 MTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNE 252
MTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNE
Sbjct: 1 MTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNE 60
Query: 253 PIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVTMKEILLKAVKRR 312
PIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVTMKEILLKAVKRR
Sbjct: 61 PIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVTMKEILLKAVKRR 120
Query: 313 KGSQKVSGPQYRLEKQSEPNVAVDLDSTLESQSAWEFCLVRENSSRADGVFEEDSQIDIA 372
KGSQKVSGPQYRLEKQSEPNVAVDLDSTLESQSAWEFCLVRENSSRADGVFEEDSQIDIA
Sbjct: 121 KGSQKVSGPQYRLEKQSEPNVAVDLDSTLESQSAWEFCLVRENSSRADGVFEEDSQIDIA 180
Query: 373 TVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISI 432
TVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISI
Sbjct: 181 TVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISI 240
Query: 433 DSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRAST 492
DSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRAST
Sbjct: 241 DSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRAST 300
Query: 493 ARADYFAQKQRKLNRRTSFSFQKEKKSGQQ 522
ARADYFAQKQRKLNRRTSFSFQKEKKSGQQ
Sbjct: 301 ARADYFAQKQRKLNRRTSFSFQKEKKSGQQ 330
>gi|56788401 mitogen-activated protein kinase associated protein 1
isoform 5 [Homo sapiens]
Length = 323
Score = 643 bits (1658), Expect = 0.0
Identities = 320/320 (100%), Positives = 320/320 (100%)
Query: 1 MAFLDNPTIILAHIRQSHVTSDDTGMCEMVLIDHDVDLEKIHPPSMPGDSGSEIQGSNGE 60
MAFLDNPTIILAHIRQSHVTSDDTGMCEMVLIDHDVDLEKIHPPSMPGDSGSEIQGSNGE
Sbjct: 1 MAFLDNPTIILAHIRQSHVTSDDTGMCEMVLIDHDVDLEKIHPPSMPGDSGSEIQGSNGE 60
Query: 61 TQGYVYAQSVDITSSWDFGIRRRSNTAQRLERLRKERQNQIKCKNIQWKERNSKQSAQEL 120
TQGYVYAQSVDITSSWDFGIRRRSNTAQRLERLRKERQNQIKCKNIQWKERNSKQSAQEL
Sbjct: 61 TQGYVYAQSVDITSSWDFGIRRRSNTAQRLERLRKERQNQIKCKNIQWKERNSKQSAQEL 120
Query: 121 KSLFEKKSLKEKPPISGKQSILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVY 180
KSLFEKKSLKEKPPISGKQSILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVY
Sbjct: 121 KSLFEKKSLKEKPPISGKQSILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVY 180
Query: 181 LPLHSSQDRLLPMTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGE 240
LPLHSSQDRLLPMTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGE
Sbjct: 181 LPLHSSQDRLLPMTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGE 240
Query: 241 VDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVT 300
VDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVT
Sbjct: 241 VDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVT 300
Query: 301 MKEILLKAVKRRKGSQKVSG 320
MKEILLKAVKRRKGSQKVSG
Sbjct: 301 MKEILLKAVKRRKGSQKVSG 320
>gi|31377611 coiled-coil domain containing 148 [Homo sapiens]
Length = 591
Score = 33.5 bits (75), Expect = 0.49
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 82 RRSNTAQRLERLRKERQNQIKCKNIQWKERNSK--QSAQELKSLFEKKSLKEKPPISGKQ 139
++ QR E+ +K ++ K K +W+E + Q +ELK L ++SLK++ + +Q
Sbjct: 404 KKKELLQRAEKKKKIKKYWAKKKQ-KWQEMEMRDLQRLEELKKLIAEQSLKDRERVKYRQ 462
Query: 140 SILSVRL 146
+L RL
Sbjct: 463 ELLERRL 469
>gi|41152097 DNA segment on chromosome X and Y (unique) 155
expressed sequence isoform 1 [Homo sapiens]
Length = 695
Score = 33.5 bits (75), Expect = 0.49
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query: 81 RRRSNTAQRLERLRKERQNQIKCKNIQWKERN----------SKQSAQELKSLFEKKSLK 130
R + LE L +ER+ + K + + K+R+ K A+E K L EK L+
Sbjct: 300 RAEERKQKELEELERERKREEKLRKREQKQRDRELRRNQKKLEKLQAEEQKQLQEKIKLE 359
Query: 131 EKPPISGKQSILSVRL 146
E+ + ++++ S+RL
Sbjct: 360 ERKLLLAQRNLQSIRL 375
>gi|11342676 thyroid hormone receptor interactor 10 [Homo sapiens]
Length = 545
Score = 33.1 bits (74), Expect = 0.63
Identities = 24/130 (18%), Positives = 54/130 (41%), Gaps = 1/130 (0%)
Query: 35 DVDLEKIHPPSMPGDSGSEIQGSNGETQGYVYAQSVDITSSWDFGIRRRSNTAQRLERLR 94
DV+ E P S S + G+ + + + T W FG + ++ + L
Sbjct: 281 DVEFEDFSQPMNRAPSDSSL-GTPSDGRPELRGPGRSRTKRWPFGKKNKTVVTEDFSHLP 339
Query: 95 KERQNQIKCKNIQWKERNSKQSAQELKSLFEKKSLKEKPPISGKQSILSVRLEQCPLQLN 154
E+Q + + ++ + R ++ + ++L + K + EK P G + L ++ + +
Sbjct: 340 PEQQRKRLQQQLEERSRELQKEVDQREALKKMKDVYEKTPQMGDPASLEPQIAETLSNIE 399
Query: 155 NPFNEYSKFD 164
E K++
Sbjct: 400 RLKLEVQKYE 409
>gi|115527060 clathrin, light polypeptide A isoform c [Homo sapiens]
Length = 236
Score = 31.2 bits (69), Expect = 2.4
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Query: 50 SGSEIQGSNGETQGYVYAQSVDITSSWDFGIRR-RSNTAQRLERLRKERQNQIKCKNIQW 108
+G Q SNG T Y VD S IR+ R +RLE L + Q +W
Sbjct: 80 NGEYYQESNGPTDSYAAISQVDRLQSEPESIRKWREEQMERLEALDANSRKQ----EAEW 135
Query: 109 KERNSKQ 115
KE+ K+
Sbjct: 136 KEKAIKE 142
>gi|4502899 clathrin, light polypeptide A isoform a [Homo sapiens]
Length = 218
Score = 31.2 bits (69), Expect = 2.4
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Query: 50 SGSEIQGSNGETQGYVYAQSVDITSSWDFGIRR-RSNTAQRLERLRKERQNQIKCKNIQW 108
+G Q SNG T Y VD S IR+ R +RLE L + Q +W
Sbjct: 80 NGEYYQESNGPTDSYAAISQVDRLQSEPESIRKWREEQMERLEALDANSRKQ----EAEW 135
Query: 109 KERNSKQ 115
KE+ K+
Sbjct: 136 KEKAIKE 142
>gi|6005993 clathrin, light polypeptide A isoform b [Homo sapiens]
Length = 248
Score = 31.2 bits (69), Expect = 2.4
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Query: 50 SGSEIQGSNGETQGYVYAQSVDITSSWDFGIRR-RSNTAQRLERLRKERQNQIKCKNIQW 108
+G Q SNG T Y VD S IR+ R +RLE L + Q +W
Sbjct: 80 NGEYYQESNGPTDSYAAISQVDRLQSEPESIRKWREEQMERLEALDANSRKQ----EAEW 135
Query: 109 KERNSKQ 115
KE+ K+
Sbjct: 136 KEKAIKE 142
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 30.8 bits (68), Expect = 3.1
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 91 ERLRKERQNQIKCKNIQWKERNSKQSAQELKSLFEKKSLKEKPPISGKQSILSVRLEQCP 150
+RLR+ER Q + + + S++ QEL E+K +E+ K +R +Q
Sbjct: 1835 QRLRQERDRQYRAEEQFATQEKSRREEQELWQEEEQKRRQER---ERKLREEHIRRQQKE 1891
Query: 151 LQLNNPFNEYSKFDGKGH 168
Q + E +GKGH
Sbjct: 1892 EQRHRQVGEIKSQEGKGH 1909
>gi|221139761 zinc finger protein 853 [Homo sapiens]
Length = 659
Score = 30.4 bits (67), Expect = 4.1
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 14/116 (12%)
Query: 39 EKIHPPSMPGDSGSEIQGSNGETQGYVYAQSVDITSSWDFGIRRRS-NTAQRLERLRKER 97
+++ PP + + E++ + VD+ S + +R+ Q LER +++R
Sbjct: 305 QQLQPPPLEPEEEEEVE---------LELMPVDLGSEQELEQQRQELERQQELERQQEQR 355
Query: 98 QNQIKC-KNIQWKERNSKQSAQELKSLFEKKSLKEKPPISGKQSILSVRLEQCPLQ 152
Q Q+K + +Q E+ +Q Q+L+ ++ L+ P G Q V+LE P+Q
Sbjct: 356 QLQLKLQEELQQLEQQLEQQQQQLEQ--QEVQLELTPVELGAQQ-QEVQLELTPVQ 408
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 30.0 bits (66), Expect = 5.4
Identities = 19/100 (19%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Query: 82 RRSNTAQRLERLRKERQNQIKCKNIQWKERNSKQSAQELKS-LFEKKSLKEKPPISGKQS 140
+R+ +++ +L+ +R+ + K ++++R K+ +++ E + +KE + K+
Sbjct: 9669 KRAVPEEKVLKLKPKREEEPPAKVTEFRKRVVKEEKVSIEAPKREPQPIKEVTIMEEKER 9728
Query: 141 ILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVY 180
++ E +Q + EY ++D K T++ D Y
Sbjct: 9729 AYTLEEEAVSVQREEEYEEYEEYDYKEFEEYEPTEEYDQY 9768
>gi|7661952 squamous cell carcinoma antigen recognized by T cells 3
[Homo sapiens]
Length = 963
Score = 30.0 bits (66), Expect = 5.4
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 76 WDFGIRRRSNTAQRLERLRKERQNQIKCKNIQWKERNSKQSAQELKSLFEKKSLKEKPPI 135
WD +++ T RL R+ ++R + K ++ +++ Q ++ EKK+LK+K I
Sbjct: 562 WDIAVQK---TETRLARVNEQRMKAAE-KEAALVQQEEEKAEQRKRARAEKKALKKKKKI 617
Query: 136 SGKQ 139
G +
Sbjct: 618 RGPE 621
>gi|189491759 p21-activated kinase 3 isoform d [Homo sapiens]
Length = 559
Score = 30.0 bits (66), Expect = 5.4
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 236 EDDGEVDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLI--- 292
E++ E + + PP+ + P H T ++VE +SP + +KE A+ +L
Sbjct: 193 EEEEEDENEPPPVIAPRPEHTKSIYTRSVVESIASPAVPNKEVTPPSAENANSSTLYRNT 252
Query: 293 --QVDNTKVTMKEILLK 307
Q +K+T +EIL K
Sbjct: 253 DRQRKKSKMTDEEILEK 269
>gi|189491757 p21-activated kinase 3 isoform c [Homo sapiens]
Length = 565
Score = 30.0 bits (66), Expect = 5.4
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 236 EDDGEVDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLI--- 292
E++ E + + PP+ + P H T ++VE +SP + +KE A+ +L
Sbjct: 199 EEEEEDENEPPPVIAPRPEHTKSIYTRSVVESIASPAVPNKEVTPPSAENANSSTLYRNT 258
Query: 293 --QVDNTKVTMKEILLK 307
Q +K+T +EIL K
Sbjct: 259 DRQRKKSKMTDEEILEK 275
>gi|189491755 p21-activated kinase 3 isoform b [Homo sapiens]
Length = 580
Score = 30.0 bits (66), Expect = 5.4
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 236 EDDGEVDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLI--- 292
E++ E + + PP+ + P H T ++VE +SP + +KE A+ +L
Sbjct: 214 EEEEEDENEPPPVIAPRPEHTKSIYTRSVVESIASPAVPNKEVTPPSAENANSSTLYRNT 273
Query: 293 --QVDNTKVTMKEILLK 307
Q +K+T +EIL K
Sbjct: 274 DRQRKKSKMTDEEILEK 290
>gi|189491753 p21-activated kinase 3 isoform a [Homo sapiens]
Length = 544
Score = 30.0 bits (66), Expect = 5.4
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 236 EDDGEVDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLI--- 292
E++ E + + PP+ + P H T ++VE +SP + +KE A+ +L
Sbjct: 178 EEEEEDENEPPPVIAPRPEHTKSIYTRSVVESIASPAVPNKEVTPPSAENANSSTLYRNT 237
Query: 293 --QVDNTKVTMKEILLK 307
Q +K+T +EIL K
Sbjct: 238 DRQRKKSKMTDEEILEK 254
>gi|189491751 p21-activated kinase 3 isoform a [Homo sapiens]
Length = 544
Score = 30.0 bits (66), Expect = 5.4
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 236 EDDGEVDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLI--- 292
E++ E + + PP+ + P H T ++VE +SP + +KE A+ +L
Sbjct: 178 EEEEEDENEPPPVIAPRPEHTKSIYTRSVVESIASPAVPNKEVTPPSAENANSSTLYRNT 237
Query: 293 --QVDNTKVTMKEILLK 307
Q +K+T +EIL K
Sbjct: 238 DRQRKKSKMTDEEILEK 254
>gi|4505601 p21-activated kinase 3 isoform a [Homo sapiens]
Length = 544
Score = 30.0 bits (66), Expect = 5.4
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 236 EDDGEVDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLI--- 292
E++ E + + PP+ + P H T ++VE +SP + +KE A+ +L
Sbjct: 178 EEEEEDENEPPPVIAPRPEHTKSIYTRSVVESIASPAVPNKEVTPPSAENANSSTLYRNT 237
Query: 293 --QVDNTKVTMKEILLK 307
Q +K+T +EIL K
Sbjct: 238 DRQRKKSKMTDEEILEK 254
>gi|190014625 DIS3 mitotic control isoform b [Homo sapiens]
Length = 928
Score = 30.0 bits (66), Expect = 5.4
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Query: 264 LVEKYSSPGLTSKESLF-----VRINAAHGFSLIQVDNTKVTMKEILLKAVKRRKGSQKV 318
L K++ + SK SL +RI++A+ I + +LK + KG+ +
Sbjct: 543 LKTKFTKSVINSKASLTYAEAQLRIDSANMNDDITTSLRGLNKLAKILKKRRIEKGALTL 602
Query: 319 SGPQYRLEKQSEPNVAVDLDS--TLESQSAWEFCLVRENSSRADGVFEEDSQ 368
S P+ R SE + +DL + E+ S E ++ N S A + EE S+
Sbjct: 603 SSPEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSE 654
>gi|190014623 DIS3 mitotic control isoform a [Homo sapiens]
Length = 958
Score = 30.0 bits (66), Expect = 5.4
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Query: 264 LVEKYSSPGLTSKESLF-----VRINAAHGFSLIQVDNTKVTMKEILLKAVKRRKGSQKV 318
L K++ + SK SL +RI++A+ I + +LK + KG+ +
Sbjct: 573 LKTKFTKSVINSKASLTYAEAQLRIDSANMNDDITTSLRGLNKLAKILKKRRIEKGALTL 632
Query: 319 SGPQYRLEKQSEPNVAVDLDS--TLESQSAWEFCLVRENSSRADGVFEEDSQ 368
S P+ R SE + +DL + E+ S E ++ N S A + EE S+
Sbjct: 633 SSPEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSE 684
>gi|15149465 caldesmon 1 isoform 5 [Homo sapiens]
Length = 532
Score = 30.0 bits (66), Expect = 5.4
Identities = 14/52 (26%), Positives = 31/52 (59%)
Query: 81 RRRSNTAQRLERLRKERQNQIKCKNIQWKERNSKQSAQELKSLFEKKSLKEK 132
+++ A LE L+K+R+ + K + + R +++ ++L+ EK+ LKE+
Sbjct: 295 QKQQEAALELEELKKKREERRKVLEEEEQRRKQEEADRKLREEEEKRRLKEE 346
>gi|15149463 caldesmon 1 isoform 4 [Homo sapiens]
Length = 558
Score = 30.0 bits (66), Expect = 5.4
Identities = 14/52 (26%), Positives = 31/52 (59%)
Query: 81 RRRSNTAQRLERLRKERQNQIKCKNIQWKERNSKQSAQELKSLFEKKSLKEK 132
+++ A LE L+K+R+ + K + + R +++ ++L+ EK+ LKE+
Sbjct: 321 QKQQEAALELEELKKKREERRKVLEEEEQRRKQEEADRKLREEEEKRRLKEE 372
>gi|15149467 caldesmon 1 isoform 3 [Homo sapiens]
Length = 564
Score = 30.0 bits (66), Expect = 5.4
Identities = 14/52 (26%), Positives = 31/52 (59%)
Query: 81 RRRSNTAQRLERLRKERQNQIKCKNIQWKERNSKQSAQELKSLFEKKSLKEK 132
+++ A LE L+K+R+ + K + + R +++ ++L+ EK+ LKE+
Sbjct: 327 QKQQEAALELEELKKKREERRKVLEEEEQRRKQEEADRKLREEEEKRRLKEE 378
>gi|4826657 caldesmon 1 isoform 2 [Homo sapiens]
Length = 538
Score = 30.0 bits (66), Expect = 5.4
Identities = 14/52 (26%), Positives = 31/52 (59%)
Query: 81 RRRSNTAQRLERLRKERQNQIKCKNIQWKERNSKQSAQELKSLFEKKSLKEK 132
+++ A LE L+K+R+ + K + + R +++ ++L+ EK+ LKE+
Sbjct: 301 QKQQEAALELEELKKKREERRKVLEEEEQRRKQEEADRKLREEEEKRRLKEE 352
>gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]
Length = 793
Score = 30.0 bits (66), Expect = 5.4
Identities = 14/52 (26%), Positives = 31/52 (59%)
Query: 81 RRRSNTAQRLERLRKERQNQIKCKNIQWKERNSKQSAQELKSLFEKKSLKEK 132
+++ A LE L+K+R+ + K + + R +++ ++L+ EK+ LKE+
Sbjct: 556 QKQQEAALELEELKKKREERRKVLEEEEQRRKQEEADRKLREEEEKRRLKEE 607
>gi|4505101 microtubule-associated protein 7 [Homo sapiens]
Length = 749
Score = 30.0 bits (66), Expect = 5.4
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 83 RSNTAQRLERLRKE-RQNQIKCKNIQWKERNSKQSAQELKSLFEKKSLKEK 132
R + QRL R R+E R+ Q+ + I W ER + K L E+K E+
Sbjct: 62 RVDDRQRLARERREEREKQLAAREIVWLEREERARQHYEKHLEERKKRLEE 112
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.130 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,741,652
Number of Sequences: 37866
Number of extensions: 797427
Number of successful extensions: 2761
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 2719
Number of HSP's gapped (non-prelim): 69
length of query: 522
length of database: 18,247,518
effective HSP length: 107
effective length of query: 415
effective length of database: 14,195,856
effective search space: 5891280240
effective search space used: 5891280240
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.