| Name: TRIP10 | Sequence: fasta or formatted (545aa) | NCBI GI: 11342676 | |
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Description: thyroid hormone receptor interactor 10
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Referenced in: Cytoskeleton
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 7.2 39 2 C cysteine 0.7 4 1 D aspartate 6.4 35 2 E glutamate 12.1 66 3 F phenylalanine 3.7 20 1 G glycine 5.0 27 2 H histidine 2.0 11 1 I isoleucine 2.2 12 2 K lysine 7.2 39 2 L leucine 8.1 44 2 M methionine 2.2 12 1 N asparagine 2.8 15 1 P proline 5.5 30 2 Q glutamine 7.3 40 3 R arginine 7.5 41 2 S serine 7.9 43 3 T threonine 3.9 21 1 V valine 5.0 27 2 W tryptophan 1.1 6 1 Y tyrosine 2.4 13 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 thyroid hormone receptor interactor 10 FNBP1L 0.539 formin binding protein 1-like isoform 1 FNBP1L 0.539 formin binding protein 1-like isoform 2 FNBP1 0.492 formin binding protein 1 FCHSD2 0.051 FCH and double SH3 domains 2 FCHSD1 0.045 FCH and double SH3 domains 1 FER 0.045 fer (fps/fes related) tyrosine kinase SRGAP1 0.032 SLIT-ROBO Rho GTPase activating protein 1 SRGAP3 0.030 SLIT-ROBO Rho GTPase activating protein 3 isoform b ... SRGAP3 0.030 SLIT-ROBO Rho GTPase activating protein 3 isoform a ... NPHP1 0.029 nephrocystin 1 isoform 3 NPHP1 0.029 nephrocystin 1 isoform 2 NPHP1 0.029 nephrocystin 1 isoform 1 ARHGAP4 0.029 Rho GTPase activating protein 4 GAS7 0.028 growth arrest-specific 7 isoform d GAS7 0.028 growth arrest-specific 7 isoform c GAS7 0.028 growth arrest-specific 7 isoform b GAS7 0.028 growth arrest-specific 7 isoform a PSTPIP1 0.028 proline-serine-threonine phosphatase interacting pro... FCHO2 0.025 FCH domain only 2 isoform a EEA1 0.025 early endosome antigen 1, 162kD TCHH 0.025 trichohyalin TTBK1 0.022 tau tubulin kinase 1 PPFIA1 0.022 PTPRF interacting protein alpha 1 isoform a PPFIA1 0.022 PTPRF interacting protein alpha 1 isoform b PACSIN1 0.022 protein kinase C and casein kinase substrate in neur... NPHP1 0.022 nephrocystin 1 isoform 4 MYH3 0.021 myosin, heavy chain 3, skeletal muscle, embryonic [H... MYH8 0.021 myosin, heavy chain 8, skeletal muscle, perinatal [... MYH11 0.021 smooth muscle myosin heavy chain 11 isoform SM1A [Ho...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
