Guide to the Human Genome
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Name: MAPKAP1 Sequence: fasta or formatted (323aa) NCBI GI: 56788401
Description:

mitogen-activated protein kinase associated protein 1 isoform 5

Referenced in:

MAP Kinase Pathways

Other entries for this name:
alt prot [486aa] mitogen-activated protein kinase associated protein 1 isoform 2
alt prot [330aa] mitogen-activated protein kinase associated protein 1 isoform 4
alt prot [330aa] mitogen-activated protein kinase associated protein 1 isoform 4
alt prot [475aa] mitogen-activated protein kinase associated protein 1 isoform 3
alt prot [522aa] mitogen-activated protein kinase associated protein 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         15           2
 C cysteine            1.9          6           1
 D aspartate           6.5         21           2
 E glutamate           6.2         20           1
 F phenylalanine       3.1         10           1
 G glycine             5.9         19           1
 H histidine           2.8          9           1
 I isoleucine          6.2         20           2
 K lysine              8.0         26           2
 L leucine             9.0         29           2
 M methionine          2.2          7           1
 N asparagine          4.3         14           2
 P proline             4.6         15           2
 Q glutamine           5.6         18           1
 R arginine            5.0         16           3
 S serine              9.9         32           2
 T threonine           5.3         17           2
 V valine              5.9         19           2
 W tryptophan          0.9          3           1
 Y tyrosine            2.2          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitogen-activated protein kinase associated protein ... 
MAPKAP1               0.989   mitogen-activated protein kinase associated protein ...
MAPKAP1               0.989   mitogen-activated protein kinase associated protein ...
MAPKAP1               0.989   mitogen-activated protein kinase associated protein ...
MAPKAP1               0.370   mitogen-activated protein kinase associated protein ...
MAPKAP1               0.370   mitogen-activated protein kinase associated protein ...
CCDC148               0.013   coiled-coil domain containing 148 
SFRS17A               0.013   DNA segment on chromosome X and Y (unique) 155 expre...
TRIP10                0.013   thyroid hormone receptor interactor 10 
CLTA                  0.010   clathrin, light polypeptide A isoform c 
CLTA                  0.010   clathrin, light polypeptide A isoform a 
CLTA                  0.010   clathrin, light polypeptide A isoform b 
TCHH                  0.010   trichohyalin 
ZNF853                0.008   zinc finger protein 853 
TTN                   0.008   titin isoform N2-A 
SART3                 0.008   squamous cell carcinoma antigen recognized by T cells...
PAK3                  0.008   p21-activated kinase 3 isoform d 
PAK3                  0.008   p21-activated kinase 3 isoform c 
PAK3                  0.008   p21-activated kinase 3 isoform b 
PAK3                  0.008   p21-activated kinase 3 isoform a 
PAK3                  0.008   p21-activated kinase 3 isoform a 
PAK3                  0.008   p21-activated kinase 3 isoform a 
CALD1                 0.008   caldesmon 1 isoform 5 
CALD1                 0.008   caldesmon 1 isoform 4 
CALD1                 0.008   caldesmon 1 isoform 3 
CALD1                 0.008   caldesmon 1 isoform 2 
CALD1                 0.008   caldesmon 1 isoform 1 
MAP7                  0.008   microtubule-associated protein 7 
SSX2IP                0.008   synovial sarcoma, X breakpoint 2 interacting protein...
NFE2L2                0.008   nuclear factor erythroid 2-like 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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