Guide to the Human Genome
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Name: MAPKAP1 Sequence: fasta or formatted (330aa) NCBI GI: 56788399
Description:

mitogen-activated protein kinase associated protein 1 isoform 4

Referenced in:

MAP Kinase Pathways

Other entries for this name:
alt prot [486aa] mitogen-activated protein kinase associated protein 1 isoform 2
alt prot [323aa] mitogen-activated protein kinase associated protein 1 isoform 5
alt mRNA [330aa] mitogen-activated protein kinase associated protein 1 isoform 4
alt prot [475aa] mitogen-activated protein kinase associated protein 1 isoform 3
alt prot [522aa] mitogen-activated protein kinase associated protein 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         22           2
 C cysteine            1.5          5           1
 D aspartate           7.0         23           2
 E glutamate           6.7         22           2
 F phenylalanine       4.5         15           1
 G glycine             3.6         12           1
 H histidine           2.7          9           2
 I isoleucine          5.5         18           1
 K lysine              8.2         27           2
 L leucine             8.5         28           2
 M methionine          1.5          5           1
 N asparagine          3.6         12           1
 P proline             3.0         10           2
 Q glutamine           5.2         17           2
 R arginine            4.5         15           2
 S serine             10.9         36           2
 T threonine           5.5         18           2
 V valine              7.0         23           2
 W tryptophan          0.9          3           1
 Y tyrosine            3.0         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitogen-activated protein kinase associated protein ... 
MAPKAP1               1.000   mitogen-activated protein kinase associated protein ...
MAPKAP1               1.000   mitogen-activated protein kinase associated protein ...
MAPKAP1               0.857   mitogen-activated protein kinase associated protein ...
MAPKAP1               0.810   mitogen-activated protein kinase associated protein ...
MAPKAP1               0.367   mitogen-activated protein kinase associated protein ...
PAK3                  0.008   p21-activated kinase 3 isoform d 
PAK3                  0.008   p21-activated kinase 3 isoform c 
PAK3                  0.008   p21-activated kinase 3 isoform b 
PAK3                  0.008   p21-activated kinase 3 isoform a 
PAK3                  0.008   p21-activated kinase 3 isoform a 
PAK3                  0.008   p21-activated kinase 3 isoform a 
DIS3                  0.008   DIS3 mitotic control isoform b 
DIS3                  0.008   DIS3 mitotic control isoform a 
ROCK1                 0.005   Rho-associated, coiled-coil containing protein kinase...
E2F6                  0.005   E2F transcription factor 6 
ZMYND15               0.005   zinc finger, MYND-type containing 15 isoform 1 [Hom...
ZMYND15               0.005   zinc finger, MYND-type containing 15 isoform 2 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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