Guide to the Human Genome
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Name: ZNF192 Sequence: fasta or formatted (578aa) NCBI GI: 56699473
Description:

zinc finger protein 192

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         26           2
 C cysteine            3.6         21           1
 D aspartate           2.9         17           1
 E glutamate          10.7         62           2
 F phenylalanine       2.6         15           1
 G glycine             7.3         42           2
 H histidine           5.7         33           1
 I isoleucine          4.8         28           1
 K lysine              5.5         32           1
 L leucine             9.0         52           2
 M methionine          0.9          5           1
 N asparagine          3.3         19           1
 P proline             4.7         27           2
 Q glutamine           7.4         43           1
 R arginine            7.8         45           2
 S serine              8.3         48           2
 T threonine           4.7         27           1
 V valine              3.6         21           2
 W tryptophan          0.9          5           1
 Y tyrosine            1.7         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 192 
ZNF397                0.431   zinc finger protein 397 isoform 1 
ZKSCAN1               0.409   zinc finger protein 36 
ZNF167                0.401   zinc finger protein 167 isoform 1 
ZSCAN12               0.398   zinc finger and SCAN domain containing 12 
ZNF197                0.371   zinc finger protein 197 isoform 1 
ZKSCAN3               0.365   zinc finger with KRAB and SCAN domains 3 
ZKSCAN4               0.360   zinc finger with KRAB and SCAN domains 4 
ZNF3                  0.350   zinc finger protein 3 isoform 2 
ZKSCAN5               0.350   zinc finger with KRAB and SCAN domains 5 
ZKSCAN5               0.350   zinc finger with KRAB and SCAN domains 5 
ZNF436                0.322   zinc finger protein 436 
ZNF436                0.322   zinc finger protein 436 
ZNF189                0.316   zinc finger protein 189 isoform 1 
ZNF135                0.307   zinc finger protein 135 
ZNF16                 0.305   zinc finger protein 16 
ZNF16                 0.305   zinc finger protein 16 
LOC344065             0.304   PREDICTED: similar to zinc finger protein 570 [Homo...
LOC344065             0.304   PREDICTED: similar to zinc finger protein 570 [Homo...
LOC344065             0.304   PREDICTED: similar to zinc finger protein 570 [Homo...
ZFP3                  0.303   zinc finger protein-3 
ZNF558                0.302   zinc finger protein 558 
ZFP2                  0.301   zinc finger protein 2 homolog 
ZNF420                0.301   zinc finger protein 420 
ZNF300                0.300   zinc finger protein 300 
ZNF23                 0.298   zinc finger protein 23 
ZNF189                0.298   zinc finger protein 189 isoform 2 
ZNF79                 0.297   zinc finger protein 79 
ZNF180                0.297   zinc finger protein 180 
ZNF160                0.295   zinc finger protein 160 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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