Guide to the Human Genome
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Name: ZNF436 Sequence: fasta or formatted (470aa) NCBI GI: 24308299
Description:

zinc finger protein 436

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt mRNA [470aa] zinc finger protein 436
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.2         15           2
 C cysteine            5.3         25           1
 D aspartate           3.6         17           1
 E glutamate          10.9         51           2
 F phenylalanine       3.4         16           1
 G glycine             7.0         33           1
 H histidine           7.7         36           1
 I isoleucine          3.4         16           1
 K lysine              6.0         28           1
 L leucine             4.9         23           2
 M methionine          1.1          5           1
 N asparagine          3.6         17           1
 P proline             3.8         18           1
 Q glutamine           5.3         25           1
 R arginine            7.4         35           2
 S serine              9.1         43           2
 T threonine           6.4         30           2
 V valine              3.4         16           2
 W tryptophan          0.9          4           1
 Y tyrosine            3.6         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 436 
ZNF436                1.000   zinc finger protein 436 
ZNF420                0.496   zinc finger protein 420 
ZNF167                0.493   zinc finger protein 167 isoform 1 
ZNF189                0.490   zinc finger protein 189 isoform 1 
ZNF852                0.487   PREDICTED: zinc finger protein 852 
ZNF852                0.487   PREDICTED: zinc finger protein 852 
ZNF135                0.485   zinc finger protein 135 
ZNF852                0.483   PREDICTED: zinc finger protein 852 
ZFP2                  0.479   zinc finger protein 2 homolog 
ZSCAN2                0.478   zinc finger protein 29 isoform 1 
LOC647678             0.477   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC647678             0.477   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC100287477          0.477   PREDICTED: hypothetical protein XP_002343697 
ZNF551                0.477   zinc finger protein 551 
ZNF665                0.477   zinc finger protein 665 
LOC100287429          0.475   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.475   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.475   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.475   zinc finger protein 84 
ZNF84                 0.475   zinc finger protein 84 
ZNF16                 0.475   zinc finger protein 16 
ZNF16                 0.475   zinc finger protein 16 
ZNF180                0.473   zinc finger protein 180 
ZNF256                0.472   zinc finger protein 256 
ZFP3                  0.470   zinc finger protein-3 
ZNF304                0.469   zinc finger protein 304 
ZNF544                0.469   zinc finger protein 544 
ZNF572                0.466   zinc finger protein 572 
ZNF606                0.466   zinc finger protein 606 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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