Guide to the Human Genome
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Name: ZNF300 Sequence: fasta or formatted (604aa) NCBI GI: 16604252
Description:

zinc finger protein 300

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5         21           1
 C cysteine            5.5         33           1
 D aspartate           3.5         21           2
 E glutamate           7.0         42           2
 F phenylalanine       4.1         25           1
 G glycine             7.0         42           3
 H histidine           6.0         36           2
 I isoleucine          6.6         40           2
 K lysine             10.4         63           2
 L leucine             5.5         33           1
 M methionine          0.7          4           2
 N asparagine          2.8         17           1
 P proline             4.0         24           1
 Q glutamine           7.5         45           2
 R arginine            4.1         25           1
 S serine              8.4         51           3
 T threonine           5.3         32           1
 V valine              4.5         27           2
 W tryptophan          0.5          3           1
 Y tyrosine            3.3         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 300 
ZNF630                0.570   zinc finger protein 630 
LOC100287429          0.479   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.479   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.479   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.479   zinc finger protein 84 
ZNF84                 0.479   zinc finger protein 84 
ZNF569                0.478   zinc finger protein 569 
ZNF182                0.475   zinc finger protein 21 isoform 2 
ZNF182                0.474   zinc finger protein 21 isoform 1 
ZNF81                 0.462   zinc finger protein 81 
ZNF568                0.458   zinc finger protein 568 
ZNF41                 0.450   zinc finger protein 41 
ZNF41                 0.450   zinc finger protein 41 
ZNF470                0.448   zinc finger protein 470 
ZNF12                 0.446   zinc finger protein 12 isoform b 
ZNF585B               0.446   zinc finger protein 585B 
ZNF175                0.444   zinc finger protein 175 
ZNF268                0.441   zinc finger protein 268 
ZNF432                0.439   zinc finger protein 432 
ZNF184                0.438   zinc finger protein 184 
ZNF624                0.438   zinc finger protein 624 
ZNF135                0.436   zinc finger protein 135 
ZNF674                0.435   zinc finger family member 674 isoform 2 
ZNF674                0.435   zinc finger family member 674 isoform 1 
ZNF471                0.434   zinc finger protein 471 
DKFZp686E2433         0.426   hypothetical protein LOC345462 
ZNF420                0.423   zinc finger protein 420 
ZNF583                0.414   zinc finger protein 583 
ZNF583                0.414   zinc finger protein 583 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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