Guide to the Human Genome
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Name: ZNF135 Sequence: fasta or formatted (658aa) NCBI GI: 34419633
Description:

zinc finger protein 135

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.0         20           1
 C cysteine            5.3         35           1
 D aspartate           2.0         13           1
 E glutamate           9.4         62           2
 F phenylalanine       3.6         24           1
 G glycine             7.1         47           1
 H histidine           7.4         49           2
 I isoleucine          3.3         22           1
 K lysine              6.8         45           1
 L leucine             6.5         43           2
 M methionine          0.5          3           1
 N asparagine          2.0         13           1
 P proline             5.5         36           1
 Q glutamine           6.7         44           1
 R arginine            6.1         40           2
 S serine              9.0         59           3
 T threonine           8.1         53           1
 V valine              3.3         22           3
 W tryptophan          1.4          9           1
 Y tyrosine            2.9         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 135 
ZNF184                0.534   zinc finger protein 184 
ZNF470                0.503   zinc finger protein 470 
ZNF420                0.491   zinc finger protein 420 
ZNF624                0.486   zinc finger protein 624 
ZNF665                0.471   zinc finger protein 665 
ZNF546                0.466   zinc finger protein 546 
ZNF569                0.465   zinc finger protein 569 
ZNF160                0.463   zinc finger protein 160 
ZNF160                0.463   zinc finger protein 160 
ZNF160                0.463   zinc finger protein 160 
ZNF429                0.461   zinc finger protein 429 
ZNF568                0.458   zinc finger protein 568 
ZNF658                0.455   zinc finger protein 658 
ZNF347                0.454   zinc finger protein 347 
ZNF780A               0.453   zinc finger protein 780A isoform b 
ZNF780A               0.453   zinc finger protein 780A isoform b 
LOC100287429          0.451   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.451   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.451   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.451   zinc finger protein 84 
ZNF84                 0.451   zinc finger protein 84 
ZNF93                 0.451   zinc finger protein 93 
ZNF595                0.450   zinc finger protein 595 
ZNF30                 0.450   zinc finger protein 30 isoform b 
ZNF534                0.449   zinc finger protein 534 isoform 1 
ZNF606                0.449   zinc finger protein 606 
ZNF30                 0.446   zinc finger protein 30 isoform a 
ZNF30                 0.446   zinc finger protein 30 isoform a 
ZNF16                 0.446   zinc finger protein 16 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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