Guide to the Human Genome
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Name: ZNF420 Sequence: fasta or formatted (688aa) NCBI GI: 22095393
Description:

zinc finger protein 420

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.3         23           1
 C cysteine            6.4         44           1
 D aspartate           1.9         13           1
 E glutamate          10.2         70           2
 F phenylalanine       3.6         25           1
 G glycine             7.0         48           1
 H histidine           7.0         48           2
 I isoleucine          4.4         30           2
 K lysine              9.7         67           1
 L leucine             6.7         46           3
 M methionine          1.6         11           1
 N asparagine          1.7         12           1
 P proline             2.9         20           1
 Q glutamine           8.4         58           2
 R arginine            6.5         45           2
 S serine              7.4         51           2
 T threonine           5.7         39           1
 V valine              1.2          8           1
 W tryptophan          0.3          2           1
 Y tyrosine            4.1         28           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 420 
ZNF546                0.576   zinc finger protein 546 
ZNF780B               0.561   zinc finger protein 780B 
ZNF571                0.551   zinc finger protein 571 
ZNF208                0.540   zinc finger protein 208 
ZNF184                0.533   zinc finger protein 184 
ZNF726                0.530   PREDICTED: zinc finger protein 726 
ZNF726                0.530   PREDICTED: zinc finger protein 726 
ZNF726                0.530   PREDICTED: zinc finger protein 726 
ZNF283                0.530   zinc finger protein 283 
ZNF160                0.524   zinc finger protein 160 
ZNF160                0.524   zinc finger protein 160 
ZNF160                0.524   zinc finger protein 160 
ZNF665                0.524   zinc finger protein 665 
ZNF616                0.524   zinc finger protein 616 
ZNF347                0.521   zinc finger protein 347 
ZNF91                 0.517   zinc finger protein 91 
ZNF43                 0.512   zinc finger protein 43 
ZNF99                 0.512   zinc finger protein 99 
ZNF470                0.511   zinc finger protein 470 
ZNF585B               0.510   zinc finger protein 585B 
ZNF624                0.506   zinc finger protein 624 
ZNF607                0.503   zinc finger protein 607 
ZNF845                0.501   zinc finger protein 845 
ZNF540                0.498   zinc finger protein 540 
ZNF658                0.497   zinc finger protein 658 
ZNF197                0.497   zinc finger protein 197 isoform 1 
ZNF30                 0.495   zinc finger protein 30 isoform a 
ZNF30                 0.495   zinc finger protein 30 isoform a 
ZNF30                 0.494   zinc finger protein 30 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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