Guide to the Human Genome
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Name: ZNF16 Sequence: fasta or formatted (682aa) NCBI GI: 96303826
Description:

zinc finger protein 16

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt mRNA [682aa] zinc finger protein 16
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         33           2
 C cysteine            6.2         42           2
 D aspartate           3.8         26           2
 E glutamate           7.6         52           2
 F phenylalanine       3.7         25           1
 G glycine             7.6         52           2
 H histidine           7.5         51           2
 I isoleucine          4.0         27           2
 K lysine              6.7         46           2
 L leucine             5.3         36           2
 M methionine          1.3          9           1
 N asparagine          2.9         20           1
 P proline             5.4         37           1
 Q glutamine           6.0         41           2
 R arginine            6.0         41           2
 S serine             10.3         70           3
 T threonine           4.5         31           1
 V valine              3.7         25           1
 W tryptophan          0.3          2           1
 Y tyrosine            2.3         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 16 
ZNF16                 1.000   zinc finger protein 16 
ZNF347                0.438   zinc finger protein 347 
ZNF665                0.437   zinc finger protein 665 
ZNF420                0.435   zinc finger protein 420 
ZNF160                0.435   zinc finger protein 160 
ZNF160                0.435   zinc finger protein 160 
ZNF160                0.435   zinc finger protein 160 
ZNF184                0.433   zinc finger protein 184 
LOC100287429          0.433   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.433   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.433   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.433   zinc finger protein 84 
ZNF84                 0.433   zinc finger protein 84 
ZNF135                0.433   zinc finger protein 135 
ZNF658                0.426   zinc finger protein 658 
ZNF624                0.425   zinc finger protein 624 
ZNF91                 0.422   zinc finger protein 91 
ZNF845                0.421   zinc finger protein 845 
ZNF208                0.418   zinc finger protein 208 
ZNF726                0.416   PREDICTED: zinc finger protein 726 
ZNF726                0.416   PREDICTED: zinc finger protein 726 
ZNF726                0.416   PREDICTED: zinc finger protein 726 
ZNF841                0.416   zinc finger protein 841 
ZNF616                0.415   zinc finger protein 616 
ZNF43                 0.414   zinc finger protein 43 
ZNF585B               0.414   zinc finger protein 585B 
ZNF585A               0.414   zinc finger protein 585A 
ZNF585A               0.414   zinc finger protein 585A 
ZNF836                0.413   zinc finger protein 836 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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