Guide to the Human Genome
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Name: ZFP3 Sequence: fasta or formatted (502aa) NCBI GI: 23308511
Description:

zinc finger protein-3

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.6         13           1
 C cysteine            5.8         29           1
 D aspartate           1.2          6           1
 E glutamate          12.9         65           2
 F phenylalanine       4.4         22           1
 G glycine             7.8         39           1
 H histidine           8.2         41           3
 I isoleucine          6.0         30           2
 K lysine              7.6         38           2
 L leucine             5.2         26           3
 M methionine          1.4          7           1
 N asparagine          3.8         19           2
 P proline             4.0         20           1
 Q glutamine           5.4         27           1
 R arginine            6.0         30           2
 S serine              8.6         43           2
 T threonine           4.8         24           2
 V valine              2.4         12           2
 W tryptophan          0.2          1           1
 Y tyrosine            2.0         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein-3 
ZNF167                0.488   zinc finger protein 167 isoform 1 
ZNF420                0.488   zinc finger protein 420 
ZNF852                0.484   PREDICTED: zinc finger protein 852 
ZNF852                0.484   PREDICTED: zinc finger protein 852 
ZNF23                 0.482   zinc finger protein 23 
ZNF135                0.482   zinc finger protein 135 
ZNF16                 0.479   zinc finger protein 16 
ZNF16                 0.479   zinc finger protein 16 
ZNF345                0.477   zinc finger protein 345 
ZNF502                0.473   zinc finger protein 502 
ZNF502                0.473   zinc finger protein 502 
ZNF502                0.473   zinc finger protein 502 
ZNF502                0.473   zinc finger protein 502 
ZNF347                0.471   zinc finger protein 347 
LOC647678             0.470   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC100287477          0.470   PREDICTED: hypothetical protein XP_002343697 
LOC100287429          0.469   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.469   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.469   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.469   zinc finger protein 84 
ZNF84                 0.469   zinc finger protein 84 
ZNF184                0.468   zinc finger protein 184 
ZNF250                0.468   zinc finger protein 250 isoform b 
ZNF250                0.468   zinc finger protein 250 isoform a 
ZFP2                  0.467   zinc finger protein 2 homolog 
LOC647678             0.467   PREDICTED: similar to zinc finger protein 347 [Homo...
ZNF665                0.467   zinc finger protein 665 
ZNF470                0.466   zinc finger protein 470 
ZNF160                0.462   zinc finger protein 160 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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