Guide to the Human Genome
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Name: ZNF3 Sequence: fasta or formatted (446aa) NCBI GI: 122114641
Description:

zinc finger protein 3 isoform 2

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [131aa] zinc finger protein 3 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0         18           3
 C cysteine            3.8         17           1
 D aspartate           4.0         18           1
 E glutamate           9.6         43           2
 F phenylalanine       3.8         17           1
 G glycine             6.7         30           2
 H histidine           5.2         23           2
 I isoleucine          4.3         19           1
 K lysine              6.7         30           1
 L leucine             7.6         34           2
 M methionine          1.3          6           1
 N asparagine          3.8         17           1
 P proline             4.0         18           1
 Q glutamine           5.2         23           1
 R arginine            7.0         31           2
 S serine              9.9         44           2
 T threonine           5.8         26           2
 V valine              3.4         15           1
 W tryptophan          0.4          2           1
 Y tyrosine            3.4         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 3 isoform 2 
ZNF436                0.462   zinc finger protein 436 
ZNF436                0.462   zinc finger protein 436 
ZNF192                0.455   zinc finger protein 192 
ZNF189                0.453   zinc finger protein 189 isoform 1 
ZNF251                0.439   zinc finger protein 251 
ZNF184                0.436   zinc finger protein 184 
ZNF167                0.426   zinc finger protein 167 isoform 1 
ZNF383                0.419   zinc finger protein 383 
ZNF154                0.417   zinc finger protein 154 
ZNF197                0.417   zinc finger protein 197 isoform 1 
ZNF286A               0.416   zinc finger protein 286 
ZNF286A               0.416   zinc finger protein 286 
ZNF420                0.415   zinc finger protein 420 
LOC344065             0.414   PREDICTED: similar to zinc finger protein 570 [Homo...
LOC344065             0.414   PREDICTED: similar to zinc finger protein 570 [Homo...
LOC344065             0.414   PREDICTED: similar to zinc finger protein 570 [Homo...
ZNF283                0.412   zinc finger protein 283 
ZNF331                0.412   zinc finger protein 331 
ZNF331                0.412   zinc finger protein 331 
ZNF331                0.412   zinc finger protein 331 
ZNF665                0.409   zinc finger protein 665 
DKFZp686E2433         0.408   hypothetical protein LOC345462 
ZNF250                0.407   zinc finger protein 250 isoform b 
ZNF250                0.404   zinc finger protein 250 isoform a 
ZNF189                0.404   zinc finger protein 189 isoform 2 
ZNF135                0.402   zinc finger protein 135 
ZNF852                0.401   PREDICTED: zinc finger protein 852 
ZNF852                0.401   PREDICTED: zinc finger protein 852 
ZNF419                0.401   zinc finger protein 419 isoform 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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