Guide to the Human Genome
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Name: ZNF189 Sequence: fasta or formatted (584aa) NCBI GI: 37574608
Description:

zinc finger protein 189 isoform 2

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [626aa] zinc finger protein 189 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.7         10           1
 C cysteine            6.3         37           1
 D aspartate           2.2         13           1
 E glutamate           9.6         56           3
 F phenylalanine       4.5         26           1
 G glycine             6.2         36           1
 H histidine           7.2         42           1
 I isoleucine          6.0         35           2
 K lysine              8.7         51           2
 L leucine             5.1         30           2
 M methionine          0.9          5           2
 N asparagine          3.1         18           1
 P proline             3.6         21           1
 Q glutamine           7.4         43           2
 R arginine            7.5         44           2
 S serine              8.0         47           2
 T threonine           5.5         32           1
 V valine              3.6         21           1
 W tryptophan          0.5          3           1
 Y tyrosine            2.4         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 189 isoform 2 
ZNF189                1.000   zinc finger protein 189 isoform 1 
ZNF420                0.493   zinc finger protein 420 
ZNF184                0.479   zinc finger protein 184 
LOC100287429          0.478   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.478   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.478   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.478   zinc finger protein 84 
ZNF84                 0.478   zinc finger protein 84 
ZNF665                0.469   zinc finger protein 665 
ZNF347                0.469   zinc finger protein 347 
ZNF470                0.467   zinc finger protein 470 
ZNF624                0.466   zinc finger protein 624 
ZNF160                0.465   zinc finger protein 160 
ZNF160                0.465   zinc finger protein 160 
ZNF160                0.465   zinc finger protein 160 
ZNF135                0.463   zinc finger protein 135 
ZNF16                 0.458   zinc finger protein 16 
ZNF16                 0.458   zinc finger protein 16 
ZNF208                0.453   zinc finger protein 208 
ZNF569                0.452   zinc finger protein 569 
ZNF616                0.451   zinc finger protein 616 
ZNF23                 0.450   zinc finger protein 23 
ZNF845                0.449   zinc finger protein 845 
ZNF91                 0.449   zinc finger protein 91 
ZNF658                0.449   zinc finger protein 658 
ZNF268                0.447   zinc finger protein 268 
ZNF418                0.447   zinc finger protein 418 
ZNF229                0.446   zinc finger protein 229 
ZNF30                 0.445   zinc finger protein 30 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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