Guide to the Human Genome
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Name: ZNF79 Sequence: fasta or formatted (498aa) NCBI GI: 188528633
Description:

zinc finger protein 79

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         33           2
 C cysteine            5.8         29           1
 D aspartate           1.6          8           1
 E glutamate           9.0         45           2
 F phenylalanine       4.2         21           2
 G glycine             7.6         38           1
 H histidine           5.4         27           2
 I isoleucine          3.0         15           2
 K lysine              7.0         35           1
 L leucine             5.6         28           2
 M methionine          1.0          5           1
 N asparagine          3.0         15           1
 P proline             6.4         32           2
 Q glutamine           5.8         29           2
 R arginine            5.6         28           1
 S serine             11.0         55           3
 T threonine           5.2         26           1
 V valine              2.6         13           1
 W tryptophan          0.6          3           1
 Y tyrosine            2.6         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 79 
ZNF570                0.458   zinc finger protein 570 
ZFP2                  0.455   zinc finger protein 2 homolog 
ZNF135                0.454   zinc finger protein 135 
DKFZp686E2433         0.452   hypothetical protein LOC345462 
ZNF167                0.449   zinc finger protein 167 isoform 1 
ZNF583                0.445   zinc finger protein 583 
ZNF583                0.445   zinc finger protein 583 
ZNF583                0.445   zinc finger protein 583 
ZNF16                 0.445   zinc finger protein 16 
ZNF16                 0.445   zinc finger protein 16 
ZNF184                0.444   zinc finger protein 184 
LOC647678             0.440   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC647678             0.439   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC100287477          0.439   PREDICTED: hypothetical protein XP_002343697 
ZNF34                 0.438   zinc finger protein 34 
ZNF383                0.437   zinc finger protein 383 
ZNF528                0.435   zinc finger protein 528 
ZNF480                0.435   zinc finger protein 480 
ZNF420                0.434   zinc finger protein 420 
ZNF502                0.432   zinc finger protein 502 
ZNF502                0.432   zinc finger protein 502 
ZNF502                0.432   zinc finger protein 502 
ZNF502                0.432   zinc finger protein 502 
ZNF180                0.431   zinc finger protein 180 
LOC344065             0.430   PREDICTED: similar to zinc finger protein 570 [Homo...
LOC344065             0.430   PREDICTED: similar to zinc finger protein 570 [Homo...
LOC344065             0.430   PREDICTED: similar to zinc finger protein 570 [Homo...
ZNF250                0.430   zinc finger protein 250 isoform b 
ZNF85                 0.429   zinc finger protein 85 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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