Guide to the Human Genome
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Name: ZNF189 Sequence: fasta or formatted (626aa) NCBI GI: 37693525
Description:

zinc finger protein 189 isoform 1

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [584aa] zinc finger protein 189 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.1         13           1
 C cysteine            5.9         37           1
 D aspartate           2.7         17           1
 E glutamate           9.6         60           3
 F phenylalanine       4.6         29           2
 G glycine             5.9         37           1
 H histidine           6.7         42           1
 I isoleucine          5.6         35           2
 K lysine              8.5         53           2
 L leucine             5.4         34           2
 M methionine          1.0          6           2
 N asparagine          2.9         18           1
 P proline             4.2         26           3
 Q glutamine           7.2         45           2
 R arginine            7.2         45           2
 S serine              8.1         51           2
 T threonine           5.4         34           1
 V valine              3.8         24           1
 W tryptophan          0.6          4           1
 Y tyrosine            2.6         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 189 isoform 1 
ZNF189                0.934   zinc finger protein 189 isoform 2 
ZNF420                0.492   zinc finger protein 420 
ZNF184                0.476   zinc finger protein 184 
ZNF665                0.473   zinc finger protein 665 
ZNF470                0.465   zinc finger protein 470 
ZNF624                0.458   zinc finger protein 624 
ZNF135                0.452   zinc finger protein 135 
ZNF569                0.449   zinc finger protein 569 
ZNF30                 0.448   zinc finger protein 30 isoform a 
ZNF30                 0.448   zinc finger protein 30 isoform a 
LOC100287429          0.447   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.447   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.447   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.447   zinc finger protein 84 
ZNF84                 0.447   zinc finger protein 84 
ZNF30                 0.446   zinc finger protein 30 isoform b 
ZNF780A               0.440   zinc finger protein 780A isoform b 
ZNF780A               0.440   zinc finger protein 780A isoform b 
ZNF780A               0.440   zinc finger protein 780A isoform a 
ZNF197                0.440   zinc finger protein 197 isoform 1 
ZNF571                0.439   zinc finger protein 571 
ZNF347                0.438   zinc finger protein 347 
ZNF595                0.436   zinc finger protein 595 
ZNF283                0.435   zinc finger protein 283 
ZNF160                0.434   zinc finger protein 160 
ZNF160                0.434   zinc finger protein 160 
ZNF160                0.434   zinc finger protein 160 
LOC388559             0.434   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.434   PREDICTED: similar to hCG1778601 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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