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Search of human proteins with 56682969
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|56682969 troponin I, skeletal, slow [Homo sapiens]
(187 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|56682969 troponin I, skeletal, slow [Homo sapiens] 368 e-102
gi|151101270 troponin I, cardiac [Homo sapiens] 217 5e-57
gi|4507621 fast-twitch skeletal muscle troponin I isoform 1 [Hom... 208 2e-54
gi|224967057 fast-twitch skeletal muscle troponin I isoform 1 [H... 208 2e-54
gi|224967106 fast-twitch skeletal muscle troponin I isoform 2 [H... 207 3e-54
gi|38570058 hypothetical protein LOC80129 [Homo sapiens] 39 0.003
gi|155722985 SMC5 protein [Homo sapiens] 37 0.008
gi|48255881 troponin T type 2, cardiac isoform 3 [Homo sapiens] 36 0.022
gi|48255877 troponin T type 2, cardiac isoform 1 [Homo sapiens] 36 0.022
gi|154354987 hook homolog 2 isoform 2 [Homo sapiens] 36 0.022
gi|154354985 hook homolog 2 isoform 1 [Homo sapiens] 36 0.022
gi|48255883 troponin T type 2, cardiac isoform 4 [Homo sapiens] 34 0.064
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] 34 0.064
gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo... 34 0.064
gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo... 34 0.064
gi|81295816 nasopharyngeal epithelium specific protein 1 [Homo s... 34 0.064
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens] 33 0.11
gi|33598968 LIM domain only 7 isoform 1 [Homo sapiens] 33 0.11
gi|48255879 troponin T type 2, cardiac isoform 2 [Homo sapiens] 33 0.11
gi|221316634 LIM domain only 7 isoform 2 [Homo sapiens] 33 0.11
gi|239747793 PREDICTED: protein immuno-reactive with anti-PTH po... 33 0.14
gi|239741684 PREDICTED: ankyrin repeat domain 36 [Homo sapiens] 33 0.19
gi|124517695 ankyrin repeat domain 36B [Homo sapiens] 33 0.19
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo... 32 0.24
gi|68299759 ecotropic viral integration site 5 [Homo sapiens] 32 0.32
gi|194353964 coiled-coil domain containing 157 [Homo sapiens] 32 0.32
gi|118918423 hypothetical protein LOC286207 [Homo sapiens] 32 0.32
gi|187173292 troponin T1, skeletal, slow isoform c [Homo sapiens] 32 0.42
gi|187173290 troponin T1, skeletal, slow isoform b [Homo sapiens] 32 0.42
gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo... 32 0.42
>gi|56682969 troponin I, skeletal, slow [Homo sapiens]
Length = 187
Score = 368 bits (945), Expect = e-102
Identities = 187/187 (100%), Positives = 187/187 (100%)
Query: 1 MPEVERKPKITASRKLLLKSLMLAKAKECWEQEHEEREAEKVRYLAERIPTLQTRGLSLS 60
MPEVERKPKITASRKLLLKSLMLAKAKECWEQEHEEREAEKVRYLAERIPTLQTRGLSLS
Sbjct: 1 MPEVERKPKITASRKLLLKSLMLAKAKECWEQEHEEREAEKVRYLAERIPTLQTRGLSLS 60
Query: 61 ALQDLCRELHAKVEVVDEERYDIEAKCLHNTREIKDLKLKVMDLRGKFKRPPLRRVRVSA 120
ALQDLCRELHAKVEVVDEERYDIEAKCLHNTREIKDLKLKVMDLRGKFKRPPLRRVRVSA
Sbjct: 61 ALQDLCRELHAKVEVVDEERYDIEAKCLHNTREIKDLKLKVMDLRGKFKRPPLRRVRVSA 120
Query: 121 DAMLRALLGSKHKVSMDLRANLKSVKKEDTEKERPVEVGDWRKNVEAMSGMEGRKKMFDA 180
DAMLRALLGSKHKVSMDLRANLKSVKKEDTEKERPVEVGDWRKNVEAMSGMEGRKKMFDA
Sbjct: 121 DAMLRALLGSKHKVSMDLRANLKSVKKEDTEKERPVEVGDWRKNVEAMSGMEGRKKMFDA 180
Query: 181 AKSPTSQ 187
AKSPTSQ
Sbjct: 181 AKSPTSQ 187
>gi|151101270 troponin I, cardiac [Homo sapiens]
Length = 210
Score = 217 bits (552), Expect = 5e-57
Identities = 113/179 (63%), Positives = 139/179 (77%), Gaps = 1/179 (0%)
Query: 2 PEVERKPKITASRKLLLKSLMLAKAKECWEQEHEEREAEKVRYLAERIPTLQTRGLSLSA 61
P ++K KI+ASRKL LK+L+L AK+ E+E EER EK R L+ R L+ GL +
Sbjct: 33 PHAKKKSKISASRKLQLKTLLLQIAKQELEREAEERRGEKGRALSTRCQPLELAGLGFAE 92
Query: 62 LQDLCRELHAKVEVVDEERYDIEAKCLHNTREIKDLKLKVMDLRGKFKRPPLRRVRVSAD 121
LQDLCR+LHA+V+ VDEERYDIEAK N EI DL K+ DLRGKFKRP LRRVR+SAD
Sbjct: 93 LQDLCRQLHARVDKVDEERYDIEAKVTKNITEIADLTQKIFDLRGKFKRPTLRRVRISAD 152
Query: 122 AMLRALLGSKHKVSMDLRANLKSVKKEDTEKERPVEVGDWRKNVEAMSGMEGRKKMFDA 180
AM++ALLG++ K S+DLRA+LK VKKEDTEKE EVGDWRKN++A+SGMEGRKK F++
Sbjct: 153 AMMQALLGARAKESLDLRAHLKQVKKEDTEKENR-EVGDWRKNIDALSGMEGRKKKFES 210
>gi|4507621 fast-twitch skeletal muscle troponin I isoform 1 [Homo
sapiens]
Length = 182
Score = 208 bits (530), Expect = 2e-54
Identities = 106/181 (58%), Positives = 138/181 (76%), Gaps = 2/181 (1%)
Query: 1 MPEVERKPKITASRKLLLKSLMLAKAKECWEQEHEEREAEKVRYLAERIPTLQTRGLSLS 60
M + E++ + +R+ LKS+ML A E+E REAEK YLAE P L G S+S
Sbjct: 1 MGDEEKRNRAITARRQHLKSVMLQIAATELEKEESRREAEKQNYLAEHCPPLHIPG-SMS 59
Query: 61 ALQDLCRELHAKVEVVDEERYDIEAKCLHNTREIKDLKLKVMDLRGKFKRPPLRRVRVSA 120
+Q+LC++LHAK++ +EE+YD+E + ++E++D+ K+ DLRGKFKRPPLRRVR+SA
Sbjct: 60 EVQELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSA 119
Query: 121 DAMLRALLGSKHKVSMDLRANLKSVKKEDTEKERPV-EVGDWRKNVEAMSGMEGRKKMFD 179
DAML+ALLGSKHKV MDLRANLK VKKEDTEKER + +VGDWRKN+E SGMEGRKKMF+
Sbjct: 120 DAMLKALLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRKNIEEKSGMEGRKKMFE 179
Query: 180 A 180
+
Sbjct: 180 S 180
>gi|224967057 fast-twitch skeletal muscle troponin I isoform 1 [Homo
sapiens]
Length = 182
Score = 208 bits (530), Expect = 2e-54
Identities = 106/181 (58%), Positives = 138/181 (76%), Gaps = 2/181 (1%)
Query: 1 MPEVERKPKITASRKLLLKSLMLAKAKECWEQEHEEREAEKVRYLAERIPTLQTRGLSLS 60
M + E++ + +R+ LKS+ML A E+E REAEK YLAE P L G S+S
Sbjct: 1 MGDEEKRNRAITARRQHLKSVMLQIAATELEKEESRREAEKQNYLAEHCPPLHIPG-SMS 59
Query: 61 ALQDLCRELHAKVEVVDEERYDIEAKCLHNTREIKDLKLKVMDLRGKFKRPPLRRVRVSA 120
+Q+LC++LHAK++ +EE+YD+E + ++E++D+ K+ DLRGKFKRPPLRRVR+SA
Sbjct: 60 EVQELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSA 119
Query: 121 DAMLRALLGSKHKVSMDLRANLKSVKKEDTEKERPV-EVGDWRKNVEAMSGMEGRKKMFD 179
DAML+ALLGSKHKV MDLRANLK VKKEDTEKER + +VGDWRKN+E SGMEGRKKMF+
Sbjct: 120 DAMLKALLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRKNIEEKSGMEGRKKMFE 179
Query: 180 A 180
+
Sbjct: 180 S 180
>gi|224967106 fast-twitch skeletal muscle troponin I isoform 2 [Homo
sapiens]
Length = 182
Score = 207 bits (528), Expect = 3e-54
Identities = 105/181 (58%), Positives = 138/181 (76%), Gaps = 2/181 (1%)
Query: 1 MPEVERKPKITASRKLLLKSLMLAKAKECWEQEHEEREAEKVRYLAERIPTLQTRGLSLS 60
M + +++ + +R+ LKS+ML A E+E REAEK YLAE P L G S+S
Sbjct: 1 MSQCKKRNRAITARRQHLKSVMLQIAATELEKEESRREAEKQNYLAEHCPPLHIPG-SMS 59
Query: 61 ALQDLCRELHAKVEVVDEERYDIEAKCLHNTREIKDLKLKVMDLRGKFKRPPLRRVRVSA 120
+Q+LC++LHAK++ +EE+YD+E + ++E++D+ K+ DLRGKFKRPPLRRVR+SA
Sbjct: 60 EVQELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSA 119
Query: 121 DAMLRALLGSKHKVSMDLRANLKSVKKEDTEKERPV-EVGDWRKNVEAMSGMEGRKKMFD 179
DAML+ALLGSKHKV MDLRANLK VKKEDTEKER + +VGDWRKN+E SGMEGRKKMF+
Sbjct: 120 DAMLKALLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRKNIEEKSGMEGRKKMFE 179
Query: 180 A 180
+
Sbjct: 180 S 180
>gi|38570058 hypothetical protein LOC80129 [Homo sapiens]
Length = 715
Score = 38.9 bits (89), Expect = 0.003
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 18/182 (9%)
Query: 4 VERKPKITASRKLLLKSLMLAKAKECWEQEHEEREAEKVRYLAER------IPTLQTRGL 57
++RK K T +L K L ++ ++ Q EE++A + + ER I LQ +
Sbjct: 486 LQRKLK-TQKERLESKELHMSLLRQKIAQLEEEKQA-RTALVVERDNAHLTIRNLQKKVE 543
Query: 58 SLSALQDLCRELHAKVEVVDEERYDIEAKCLHNTREIKDLKLKVMDLRGKFK---RPPLR 114
L + CR+LH +++ + +++ K L T+ I+DL K D K K L
Sbjct: 544 RLQKELNTCRDLHTELKAKLADTNELKIKTLEQTKAIEDLN-KSRDQLEKMKEKAEKKLM 602
Query: 115 RVRVSADAMLRALLGSKHKVSMDLR---ANLKSVKK--EDTEKERPVEVGDWRKNVEAMS 169
V+ D +K + + + +K++KK E+ EK R ++ D+R+ V M
Sbjct: 603 SVKSELDTTEHEAKENKERARNMIEVVTSEMKTLKKSLEEAEK-REKQLADFREVVSQML 661
Query: 170 GM 171
G+
Sbjct: 662 GL 663
Score = 27.3 bits (59), Expect = 7.9
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 9/93 (9%)
Query: 18 LKSLMLAKAKECWEQEHEEREAEKVRYLAERIPTLQTRGLSLSALQDLCRELHAKVEVVD 77
L+S ML+K C +E +AE Y + L++L+D +EL + +
Sbjct: 66 LRSKMLSKEVSC-----QELKAEMESYKENNA----RKSSLLTSLRDRVQELEEESAALS 116
Query: 78 EERYDIEAKCLHNTREIKDLKLKVMDLRGKFKR 110
+ E +E ++LK KV++L K ++
Sbjct: 117 TSKIRTEITAHAAIKENQELKKKVVELNEKLQK 149
>gi|155722985 SMC5 protein [Homo sapiens]
Length = 1101
Score = 37.4 bits (85), Expect = 0.008
Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 29/154 (18%)
Query: 14 RKLLLKSLMLAKAKECW-EQEHEEREAEKVRYLAERIPTLQTRGLSLSALQDLCRELHAK 72
RK L + + +AK W E E+ +E E+V+ + +R+ + R L + CR
Sbjct: 256 RKRHLDLIEMLEAKRPWVEYENVRQEYEEVKLVRDRVKE-EVRKLKEGQIPVTCR----- 309
Query: 73 VEVVDEERYDIEAKCLHNTREIKDLKLKVMDLRGKFKRPPLRRVRVSADAMLRALLGSKH 132
+E ++ ER+++EA+ +IK+ K K K+ + R + + +AL
Sbjct: 310 IEEMENERHNLEARIKEKATDIKEASQKC-----KQKQDVIERKDKHIEELQQAL----- 359
Query: 133 KVSMDLRANLKSVKKEDTEKERPVEVGDWRKNVE 166
+ K++ E +R +G+ RK +E
Sbjct: 360 ------------IVKQNEELDRQRRIGNTRKMIE 381
>gi|48255881 troponin T type 2, cardiac isoform 3 [Homo sapiens]
Length = 285
Score = 35.8 bits (81), Expect = 0.022
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 12/118 (10%)
Query: 3 EVERKPKITASRKLLLKSLM-----LAKAKECWEQEHEEREAEKVRYLAERIPTLQTRGL 57
E RK + A +K L ++M + K + + ERE +K + LAER L L
Sbjct: 163 ENRRKAEDEARKKKALSNMMHFGGYIQKTERKSGKRQTEREKKK-KILAERRKVLAIDHL 221
Query: 58 SLSALQDLCRELHAKVEVVDEERYDIEAKCLHNTREIKDLKLKVMD------LRGKFK 109
+ L++ +EL + ++ E++D++ K EI L+ ++ D RGK K
Sbjct: 222 NEDQLREKAKELWQSIYNLEAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRGKAK 279
>gi|48255877 troponin T type 2, cardiac isoform 1 [Homo sapiens]
Length = 295
Score = 35.8 bits (81), Expect = 0.022
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 12/118 (10%)
Query: 3 EVERKPKITASRKLLLKSLM-----LAKAKECWEQEHEEREAEKVRYLAERIPTLQTRGL 57
E RK + A +K L ++M + K + + ERE +K + LAER L L
Sbjct: 173 ENRRKAEDEARKKKALSNMMHFGGYIQKTERKSGKRQTEREKKK-KILAERRKVLAIDHL 231
Query: 58 SLSALQDLCRELHAKVEVVDEERYDIEAKCLHNTREIKDLKLKVMD------LRGKFK 109
+ L++ +EL + ++ E++D++ K EI L+ ++ D RGK K
Sbjct: 232 NEDQLREKAKELWQSIYNLEAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRGKAK 289
>gi|154354987 hook homolog 2 isoform 2 [Homo sapiens]
Length = 717
Score = 35.8 bits (81), Expect = 0.022
Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 25/161 (15%)
Query: 2 PEVERKPKITASRKLLLKSLMLAKAKECWEQEHEEREAEKVR--YLAERIPTLQTRGLSL 59
PE E P +TA + LLL+S + +E + E RE E++R L + LQ R
Sbjct: 225 PEGEGTPGLTAKKLLLLQSQLEQLQEENFRLE-SGREDERLRCAELEREVAELQHRN--- 280
Query: 60 SALQDLCRELHAKVEVVDEERYDIE---------AKCLHNTREIKDLKLKVMDLRGKFKR 110
AL L +E A + +DE R E C E+++L+ +V L +
Sbjct: 281 QALTSLAQEAQALKDEMDELRQSSERAGQLEATLTSCRRRLGELRELRRQVRQLEER-NA 339
Query: 111 PPLRRVRVSADAMLRALLGSKHKVSMDLRANLKSVKKEDTE 151
R R D + RA GS LRA L++ +++ E
Sbjct: 340 GHAERTRQLEDELRRA--GS-------LRAQLEAQRRQVQE 371
>gi|154354985 hook homolog 2 isoform 1 [Homo sapiens]
Length = 719
Score = 35.8 bits (81), Expect = 0.022
Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 25/161 (15%)
Query: 2 PEVERKPKITASRKLLLKSLMLAKAKECWEQEHEEREAEKVR--YLAERIPTLQTRGLSL 59
PE E P +TA + LLL+S + +E + E RE E++R L + LQ R
Sbjct: 225 PEGEGTPGLTAKKLLLLQSQLEQLQEENFRLE-SGREDERLRCAELEREVAELQHRN--- 280
Query: 60 SALQDLCRELHAKVEVVDEERYDIE---------AKCLHNTREIKDLKLKVMDLRGKFKR 110
AL L +E A + +DE R E C E+++L+ +V L +
Sbjct: 281 QALTSLAQEAQALKDEMDELRQSSERAGQLEATLTSCRRRLGELRELRRQVRQLEER-NA 339
Query: 111 PPLRRVRVSADAMLRALLGSKHKVSMDLRANLKSVKKEDTE 151
R R D + RA GS LRA L++ +++ E
Sbjct: 340 GHAERTRQLEDELRRA--GS-------LRAQLEAQRRQVQE 371
>gi|48255883 troponin T type 2, cardiac isoform 4 [Homo sapiens]
Length = 282
Score = 34.3 bits (77), Expect = 0.064
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 16/121 (13%)
Query: 3 EVERKPKITASRKLLLKSLM-----LAKAKECWEQEHEEREAE---KVRYLAERIPTLQT 54
E RK + A +K L ++M + KA+ E++ +R+ E K + LAER L
Sbjct: 158 ENRRKAEDEARKKKALSNMMHFGGYIQKAQT--ERKSGKRQTEREKKKKILAERRKVLAI 215
Query: 55 RGLSLSALQDLCRELHAKVEVVDEERYDIEAKCLHNTREIKDLKLKVMD------LRGKF 108
L+ L++ +EL + ++ E++D++ K EI L+ ++ D RGK
Sbjct: 216 DHLNEDQLREKAKELWQSIYNLEAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRGKA 275
Query: 109 K 109
K
Sbjct: 276 K 276
>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
Length = 1411
Score = 34.3 bits (77), Expect = 0.064
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 14/97 (14%)
Query: 25 KAKECWEQEHEEREAE---KVRYLAERIPTLQTRGLS----LSALQDLCRELHAKVEVVD 77
K KE ++HEE EA+ ++ L E + T++ S +S L+ +L ++ V++
Sbjct: 1223 KEKEVGMKKHEENEAKLTMQITALNENLGTVKKEWQSSQRRVSELEKQTDDLRGEIAVLE 1282
Query: 78 -------EERYDIEAKCLHNTREIKDLKLKVMDLRGK 107
+ER + +CL EI+ L+ KV++L+ K
Sbjct: 1283 ATVQNNQDERRALLERCLKGEGEIEKLQTKVLELQRK 1319
>gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 34.3 bits (77), Expect = 0.064
Identities = 50/201 (24%), Positives = 95/201 (47%), Gaps = 34/201 (16%)
Query: 3 EVER-KPKITASRKLLLKSLM-LAKAKECWEQEHEEREAEKVRYLAERIPTLQTRGLSLS 60
++ER K K+ KL +S+M + K+ +++ +++E E + L +I Q G+ L
Sbjct: 1053 DLERAKRKLEGDLKLAQESIMDIENEKQQLDEKLKKKEFE-ISNLQSKIEDEQALGIQL- 1110
Query: 61 ALQDLCRELHAKVEVVDEE-------RYDIEAKCLHNTREIKDLKLKVMDLRG------- 106
Q +EL A++E ++EE R E + +RE++++ ++ + G
Sbjct: 1111 --QKKIKELQARIEELEEEIEAERASRAKAEKQRSDLSRELEEISERLEEAGGATSAQIE 1168
Query: 107 --KFKRPPLRRVRVS-ADAMLR-----ALLGSKHKVSM----DLRANLKSVKK--EDTEK 152
K + +++R +A L+ A L KH S+ + NL+ VK+ E +
Sbjct: 1169 MNKKREAEFQKMRRDLEEATLQHEATAATLRKKHADSVAELGEQIDNLQRVKQKLEKEKS 1228
Query: 153 ERPVEVGDWRKNVEAMSGMEG 173
E +E+ D NVE +S +G
Sbjct: 1229 EMKMEIDDLASNVETVSKAKG 1249
>gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 34.3 bits (77), Expect = 0.064
Identities = 50/201 (24%), Positives = 95/201 (47%), Gaps = 34/201 (16%)
Query: 3 EVER-KPKITASRKLLLKSLM-LAKAKECWEQEHEEREAEKVRYLAERIPTLQTRGLSLS 60
++ER K K+ KL +S+M + K+ +++ +++E E + L +I Q G+ L
Sbjct: 1053 DLERAKRKLEGDLKLAQESIMDIENEKQQLDEKLKKKEFE-ISNLQSKIEDEQALGIQL- 1110
Query: 61 ALQDLCRELHAKVEVVDEE-------RYDIEAKCLHNTREIKDLKLKVMDLRG------- 106
Q +EL A++E ++EE R E + +RE++++ ++ + G
Sbjct: 1111 --QKKIKELQARIEELEEEIEAERASRAKAEKQRSDLSRELEEISERLEEAGGATSAQIE 1168
Query: 107 --KFKRPPLRRVRVS-ADAMLR-----ALLGSKHKVSM----DLRANLKSVKK--EDTEK 152
K + +++R +A L+ A L KH S+ + NL+ VK+ E +
Sbjct: 1169 MNKKREAEFQKMRRDLEEATLQHEATAATLRKKHADSVAELGEQIDNLQRVKQKLEKEKS 1228
Query: 153 ERPVEVGDWRKNVEAMSGMEG 173
E +E+ D NVE +S +G
Sbjct: 1229 EMKMEIDDLASNVETVSKAKG 1249
>gi|81295816 nasopharyngeal epithelium specific protein 1 [Homo
sapiens]
Length = 551
Score = 34.3 bits (77), Expect = 0.064
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 15/154 (9%)
Query: 5 ERKPKITASRKLLLKSLMLAKAKECWEQEHEEREAEKVRYLAE----RIPTLQTRGLSLS 60
++K ++ A KL + +M K+ + E E E++R E R+ +Q +
Sbjct: 324 KQKAELLAQEKLADQMVMEFTKKKMAREAEFEAEQERIRREKEKEIARLRAMQEKAQDYQ 383
Query: 61 ALQDLCRELHAKVEVVDEERYDIEAKCLHNTREIKDLKLKVMDLRGKFKRPPLRRVRVSA 120
A QD R + EV D E R+ K+ K M+ + ++ L +V
Sbjct: 384 AEQDALRAKRNQ-EVADREW----------RRKEKENARKKMETEAELRKSRLEQVAFKE 432
Query: 121 DAMLRALLGSKHKVSMDLRANLKSVKKEDTEKER 154
A+ + + + LRA + ++KE E+E+
Sbjct: 433 HALAVQVQRDRDEFERILRAQREQIEKERLEEEK 466
>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
Length = 1684
Score = 33.5 bits (75), Expect = 0.11
Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 21/173 (12%)
Query: 3 EVERKPKITASRKLLLKSLMLAKAKE-CWEQEHEEREAEK----------VRYLAERIPT 51
++E PK + + +++ KAK C E E E E ++ L ER+
Sbjct: 21 KLETLPKEDLIKFAKKQMMLIQKAKSRCTELEKEIEELRSKPVTEGTGDIIKALTERLDA 80
Query: 52 L-----QTRGLSLSALQD---LCRELHAKVEVVDEERYDIEAKCLHNTREIKDLKLKVMD 103
L +T LS ++ + +E+ V + + ++E ++ +EI++LK ++M
Sbjct: 81 LLLEKAETEQQCLSLKKENIKMKQEVEDSVTKMGDAHKELEQSHINYVKEIENLKNELMA 140
Query: 104 LRGKFKRPPLRRVRVSADAMLRAL-LGSKHKVSMDLRANLKSVKKEDTEKERP 155
+R K+ + +AM L L + K + N+K + +E+ EK RP
Sbjct: 141 VRSKYSEDKANLQKQLEEAMNTQLELSEQLKFQNNSEDNVKKL-QEEIEKIRP 192
>gi|33598968 LIM domain only 7 isoform 1 [Homo sapiens]
Length = 1349
Score = 33.5 bits (75), Expect = 0.11
Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 22/163 (13%)
Query: 25 KAKECWEQEHEEREAEKVRYLAERIPTLQTRGLSLSALQDLCRELHAK------------ 72
K +E W++ +E E E +YL E + L + +SL+ + A
Sbjct: 921 KLREEWQRAKQEAERENSKYLDEELMVLSSNSMSLTTREPSLATWEATWSEGSKSSDREG 980
Query: 73 VEVVDEERYDIEAKCLHNTREIKDLKLKVMDLRGKFKR-----PPLRRVRVSADAMLRAL 127
+EER + + +H + K V++ K+++ +R++ A+ R
Sbjct: 981 TRAGEEERRQPQEEVVHEDQGKKPQDQLVIERERKWEQQLQEEQEQKRLQAEAEEQKRPA 1040
Query: 128 LGSKHKVSMDLRANLKSVKKEDTEKERPVEVGDWRKNVEAMSG 170
K + ++ +++ + RPV+ D K EA SG
Sbjct: 1041 EEQKRQAEIERETSVRIY-----QYRRPVDSYDIPKTEEASSG 1078
>gi|48255879 troponin T type 2, cardiac isoform 2 [Homo sapiens]
Length = 288
Score = 33.5 bits (75), Expect = 0.11
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 15/121 (12%)
Query: 3 EVERKPKITASRKLLLKSLM--------LAKAKECWEQEHEEREAEKVRYLAERIPTLQT 54
E RK + A +K L ++M A+ + + ERE +K + LAER L
Sbjct: 163 ENRRKAEDEARKKKALSNMMHFGGYIQKQAQTERKSGKRQTEREKKK-KILAERRKVLAI 221
Query: 55 RGLSLSALQDLCRELHAKVEVVDEERYDIEAKCLHNTREIKDLKLKVMD------LRGKF 108
L+ L++ +EL + ++ E++D++ K EI L+ ++ D RGK
Sbjct: 222 DHLNEDQLREKAKELWQSIYNLEAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRGKA 281
Query: 109 K 109
K
Sbjct: 282 K 282
>gi|221316634 LIM domain only 7 isoform 2 [Homo sapiens]
Length = 1385
Score = 33.5 bits (75), Expect = 0.11
Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 22/163 (13%)
Query: 25 KAKECWEQEHEEREAEKVRYLAERIPTLQTRGLSLSALQDLCRELHAK------------ 72
K +E W++ +E E E +YL E + L + +SL+ + A
Sbjct: 970 KLREEWQRAKQEAERENSKYLDEELMVLSSNSMSLTTREPSLATWEATWSEGSKSSDREG 1029
Query: 73 VEVVDEERYDIEAKCLHNTREIKDLKLKVMDLRGKFKR-----PPLRRVRVSADAMLRAL 127
+EER + + +H + K V++ K+++ +R++ A+ R
Sbjct: 1030 TRAGEEERRQPQEEVVHEDQGKKPQDQLVIERERKWEQQLQEEQEQKRLQAEAEEQKRPA 1089
Query: 128 LGSKHKVSMDLRANLKSVKKEDTEKERPVEVGDWRKNVEAMSG 170
K + ++ +++ + RPV+ D K EA SG
Sbjct: 1090 EEQKRQAEIERETSVRIY-----QYRRPVDSYDIPKTEEASSG 1127
>gi|239747793 PREDICTED: protein immuno-reactive with anti-PTH
polyclonal antibodies [Homo sapiens]
Length = 868
Score = 33.1 bits (74), Expect = 0.14
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 21/141 (14%)
Query: 15 KLLLKSLMLAKAKEC-WEQEHEEREAEKVRYLAERIPTLQTRGLSLSALQDLCRELHAKV 73
K+L+ L +K KEC +E+E ERE VR L ++ + +G + AL D
Sbjct: 731 KMLVNELTHSKEKECQYEKEKAEREV-AVRQLQQKRDDVLNKGSATKALLDAS------- 782
Query: 74 EVVDEERYDIEAKCLHNTREIKDLKLKVMDLRGKFKRPPLRRVRVSADAMLRALLGSKHK 133
C + ++D + K+ +R +F+ ++ + + + G K
Sbjct: 783 ----------SRHCTYLENGMQDSRKKLDQMRSQFQE--IQDQLTATIRCTKEMEGDAQK 830
Query: 134 VSMDLRANLKSVKKEDTEKER 154
+ ++ K +KK+D + ER
Sbjct: 831 LEVENVMMRKIIKKQDEQIER 851
>gi|239741684 PREDICTED: ankyrin repeat domain 36 [Homo sapiens]
Length = 1524
Score = 32.7 bits (73), Expect = 0.19
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 21/141 (14%)
Query: 15 KLLLKSLMLAKAKEC-WEQEHEEREAEKVRYLAERIPTLQTRGLSLSALQDLCRELHAKV 73
K+L+ L +K KEC +E+E ERE VR L ++ + +G + AL D
Sbjct: 1387 KMLVNELNHSKEKECQYEKEKAEREV-AVRQLQQKRDDVLNKGSATKALLDAS------- 1438
Query: 74 EVVDEERYDIEAKCLHNTREIKDLKLKVMDLRGKFKRPPLRRVRVSADAMLRALLGSKHK 133
C + ++D + K+ +R +F+ ++ + + + G K
Sbjct: 1439 ----------SRHCTYLENGMQDSRKKLDQMRSQFQE--IQDQLTATIRCTKEMEGDTQK 1486
Query: 134 VSMDLRANLKSVKKEDTEKER 154
+ ++ K +KK+D + ER
Sbjct: 1487 LEVEHVMMRKIIKKQDDQIER 1507
>gi|124517695 ankyrin repeat domain 36B [Homo sapiens]
Length = 1121
Score = 32.7 bits (73), Expect = 0.19
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 21/141 (14%)
Query: 15 KLLLKSLMLAKAKEC-WEQEHEEREAEKVRYLAERIPTLQTRGLSLSALQDLCRELHAKV 73
K+L+ L +K KEC +E+E ERE VR L ++ + +G + AL D
Sbjct: 984 KMLVNELNHSKEKECQYEKEKAEREV-AVRQLQQKRDDVLNKGSATKALLDAS------- 1035
Query: 74 EVVDEERYDIEAKCLHNTREIKDLKLKVMDLRGKFKRPPLRRVRVSADAMLRALLGSKHK 133
C + ++D + K+ +R +F+ ++ + + + G K
Sbjct: 1036 ----------SRHCTYLENGMQDSRKKLDQMRSQFQE--IQDQLTATIRCTKEMEGDTQK 1083
Query: 134 VSMDLRANLKSVKKEDTEKER 154
+ ++ K +KK+D + ER
Sbjct: 1084 LEVEHVMMRKIIKKQDDQIER 1104
>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
sapiens]
Length = 1938
Score = 32.3 bits (72), Expect = 0.24
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 34/197 (17%)
Query: 3 EVER-KPKITASRKLLLKSLM-LAKAKECWEQEHEEREAEKVRYLAERIPTLQTRGLSLS 60
++ER K K+ K+ +S+M L K+ E++ +++E E + L +I Q L
Sbjct: 1051 DLERAKRKLEGDLKMSQESIMDLENDKQQIEEKLKKKEFE-LSQLQAKIDDEQVHSLQF- 1108
Query: 61 ALQDLCRELHAKVEVVDEE-------RYDIEAKCLHNTREIKDLKLKV------------ 101
Q +EL A++E ++EE R IE + RE++++ ++
Sbjct: 1109 --QKKIKELQARIEELEEEIEAEHTLRAKIEKQRSDLARELEEISERLEEASGATSAQIE 1166
Query: 102 MDLRGKFKRPPLRRVRVSADAMLRALLGSKHKVSMDLRA-------NLKSVKK--EDTEK 152
M+ + + + +RR A A + K D A NL+ VK+ E +
Sbjct: 1167 MNKKREAEFQKMRRDLEEATLQHEATAATLRKKQADSVAELGEQIDNLQRVKQKLEKEKS 1226
Query: 153 ERPVEVGDWRKNVEAMS 169
E +E+ D N+EA+S
Sbjct: 1227 ELKMEIDDMASNIEALS 1243
>gi|68299759 ecotropic viral integration site 5 [Homo sapiens]
Length = 810
Score = 32.0 bits (71), Expect = 0.32
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 15 KLLLKSLMLAKAKECWEQEHEEREAEKVRYLAERIPTLQTRGLSLSALQDLCRELHAKVE 74
K L K K KE EQ +R + R L +RI TL+ S + +D +L + E
Sbjct: 409 KKLEKEYTTIKTKEMEEQVEIKRLRTENRLLKQRIETLEKHKCSSNYNEDFVLQL--EKE 466
Query: 75 VVDEERYDIEAKCLHNTREIKDLKLKVMDL 104
+V + E++C +K+++ KV+D+
Sbjct: 467 LVQARLSEAESQC-----ALKEMQDKVLDI 491
>gi|194353964 coiled-coil domain containing 157 [Homo sapiens]
Length = 752
Score = 32.0 bits (71), Expect = 0.32
Identities = 25/97 (25%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 4 VERKPKITASRKLLLKSL-MLAKAKECWEQEHEEREAEKVRYLAERIPTLQTRG-LSLSA 61
V + + A ++ LLK L L + +E +E EA++ R + E++ + + +G L A
Sbjct: 441 VRHQESLQAKQRALLKQLDSLDQEREELRGSLDEAEAQRAR-VEEQLQSEREQGQCQLRA 499
Query: 62 LQDLCRELHAKVEVVDEERYDIEAKCLHNTREIKDLK 98
Q+L + L + + +++ D+ L RE+++LK
Sbjct: 500 QQELLQSLQREKQGLEQATTDLRLTILELERELEELK 536
>gi|118918423 hypothetical protein LOC286207 [Homo sapiens]
Length = 520
Score = 32.0 bits (71), Expect = 0.32
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 4 VERKPKITASRKLLLKSLMLAKAKECWEQEHEEREAEKVRYLAERIPTLQTRGLSL 59
+E K+ A K + ++L K+C EQ+ + +EAE++R L + L+ R L L
Sbjct: 269 LENTQKVMARHKRGHQKIILMLTKKCQEQQQDTKEAEELRLL---LSQLEQRSLQL 321
>gi|187173292 troponin T1, skeletal, slow isoform c [Homo sapiens]
Length = 251
Score = 31.6 bits (70), Expect = 0.42
Identities = 28/114 (24%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 3 EVERKPKITASRKLLLKSL------MLAKAKECWEQEHEEREAEKVRYLAERIPTLQTRG 56
E +++ + A +K +L ++ L KA++ + RE KVR L+ER L
Sbjct: 128 EAKKRAEDDAKKKKVLSNMGAHFGGYLVKAEQKRGKRQTGREM-KVRILSERKKPLDIDY 186
Query: 57 LSLSALQDLCRELHAKVEVVDEERYDIEAKCLHNTREIKDLKLKVMDLRGKFKR 110
+ L++ +EL + ++ E++D+ AK EI L ++ + KF++
Sbjct: 187 MGEEQLREKAQELSDWIHQLESEKFDLMAKLKQQKYEINVLYNRISHAQ-KFRK 239
>gi|187173290 troponin T1, skeletal, slow isoform b [Homo sapiens]
Length = 262
Score = 31.6 bits (70), Expect = 0.42
Identities = 28/114 (24%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 3 EVERKPKITASRKLLLKSL------MLAKAKECWEQEHEEREAEKVRYLAERIPTLQTRG 56
E +++ + A +K +L ++ L KA++ + RE KVR L+ER L
Sbjct: 139 EAKKRAEDDAKKKKVLSNMGAHFGGYLVKAEQKRGKRQTGREM-KVRILSERKKPLDIDY 197
Query: 57 LSLSALQDLCRELHAKVEVVDEERYDIEAKCLHNTREIKDLKLKVMDLRGKFKR 110
+ L++ +EL + ++ E++D+ AK EI L ++ + KF++
Sbjct: 198 MGEEQLREKAQELSDWIHQLESEKFDLMAKLKQQKYEINVLYNRISHAQ-KFRK 250
>gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo
sapiens]
Length = 1939
Score = 31.6 bits (70), Expect = 0.42
Identities = 53/216 (24%), Positives = 101/216 (46%), Gaps = 35/216 (16%)
Query: 3 EVER-KPKITASRKLLLKSLM-LAKAKECWEQEHEEREAEKVRYLAERIPTLQTRGLSLS 60
++ER K K+ KL +S M + K+ +++ +++E E + L +I Q G+ L
Sbjct: 1051 DLERAKRKLEGDLKLAQESTMDIENDKQQLDEKLKKKEFE-MSGLQSKIEDEQALGMQL- 1108
Query: 61 ALQDLCRELHAKVEVVDEE-------RYDIEAKCLHNTREIKDLKLKVMDLRG------- 106
Q +EL A++E ++EE R E + +RE++++ ++ + G
Sbjct: 1109 --QKKIKELQARIEELEEEIEAERASRAKAEKQRSDLSRELEEISERLEEAGGATSAQIE 1166
Query: 107 --KFKRPPLRRVRVS-ADAMLR-----ALLGSKHKVSM----DLRANLKSVKK--EDTEK 152
K + +++R +A L+ A L KH S+ + NL+ VK+ E +
Sbjct: 1167 MNKKREAEFQKMRRDLEEATLQHEATAATLRKKHADSVAELGEQIDNLQRVKQKLEKEKS 1226
Query: 153 ERPVEVGDWRKNVEAMSGMEGR-KKMFDAAKSPTSQ 187
E +E+ D N+E +S +G +KM A + S+
Sbjct: 1227 EMKMEIDDLASNMETVSKAKGNLEKMCRALEDQLSE 1262
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.130 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,286,202
Number of Sequences: 37866
Number of extensions: 236694
Number of successful extensions: 1261
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 1169
Number of HSP's gapped (non-prelim): 161
length of query: 187
length of database: 18,247,518
effective HSP length: 96
effective length of query: 91
effective length of database: 14,612,382
effective search space: 1329726762
effective search space used: 1329726762
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.