CCDC19 36353

Name: CCDC19	Sequence: fasta or formatted (551aa)		NCBI GI: 81295816
Description: nasopharyngeal epithelium specific protein 1		Referenced in: Coiled-Coil Proteins Lung
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.5 47 2 C cysteine 0.4 2 1 D aspartate 4.4 24 1 E glutamate 16.7 92 3 F phenylalanine 1.5 8 1 G glycine 1.6 9 1 H histidine 0.9 5 1 I isoleucine 5.3 29 2 K lysine 10.7 59 3 L leucine 8.7 48 2 M methionine 3.6 20 2 N asparagine 3.3 18 3 P proline 1.6 9 1 Q glutamine 9.1 50 3 R arginine 11.6 64 2 S serine 4.2 23 4 T threonine 3.3 18 1 V valine 3.4 19 1 W tryptophan 0.5 3 1 Y tyrosine 0.7 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nasopharyngeal epithelium specific protein 1 LOC283685 0.102 PREDICTED: golgi autoantigen, golgin subfamily a-li... TCHH 0.102 trichohyalin LOC283685 0.098 PREDICTED: golgi autoantigen, golgin subfamily a-li... LOC283767 0.096 golgi autoantigen, golgin subfamily a-like LOC727832 0.093 golgi autoantigen, golgin subfamily a-like LOC440243 0.090 PREDICTED: Putative golgin subfamily A member 6-lik... MNS1 0.085 meiosis-specific nuclear structural 1 LOC100286959 0.081 PREDICTED: hypothetical protein XP_002343921 LOC645202 0.081 PREDICTED: hypothetical protein LOC645202 INCENP 0.075 inner centromere protein antigens 135/155kDa isofor... PLEC1 0.074 plectin 1 isoform 11 PLEC1 0.074 plectin 1 isoform 10 PLEC1 0.074 plectin 1 isoform 8 PLEC1 0.074 plectin 1 isoform 7 PLEC1 0.074 plectin 1 isoform 6 PLEC1 0.074 plectin 1 isoform 3 PLEC1 0.074 plectin 1 isoform 2 PLEC1 0.074 plectin 1 isoform 1 INCENP 0.071 inner centromere protein antigens 135/155kDa isofor... AZI1 0.068 5-azacytidine induced 1 isoform a MYH9 0.067 myosin, heavy polypeptide 9, non-muscle CALD1 0.066 caldesmon 1 isoform 1 GIGYF2 0.066 GRB10 interacting GYF protein 2 isoform c GIGYF2 0.066 GRB10 interacting GYF protein 2 isoform a GIGYF2 0.066 GRB10 interacting GYF protein 2 isoform b GIGYF2 0.066 GRB10 interacting GYF protein 2 isoform b LOC100133758 0.065 PREDICTED: hypothetical protein, partial MYH11 0.064 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.064 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.