Guide to the Human Genome
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Name: HOOK2 Sequence: fasta or formatted (717aa) NCBI GI: 154354987
Description:

hook homolog 2 isoform 2

Referenced in:

Tubulins and Microtubules

Other entries for this name:
alt prot [719aa] hook homolog 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         58           2
 C cysteine            1.4         10           1
 D aspartate           4.6         33           1
 E glutamate          13.8         99           2
 F phenylalanine       1.3          9           1
 G glycine             4.0         29           2
 H histidine           2.4         17           1
 I isoleucine          1.8         13           1
 K lysine              4.3         31           2
 L leucine            14.9        107           4
 M methionine          2.2         16           1
 N asparagine          2.6         19           1
 P proline             3.8         27           2
 Q glutamine           9.1         65           3
 R arginine           10.5         75           3
 S serine              6.3         45           2
 T threonine           3.5         25           1
 V valine              3.2         23           2
 W tryptophan          0.8          6           1
 Y tyrosine            1.4         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hook homolog 2 isoform 2 
HOOK2                 0.996   hook homolog 2 isoform 1 
HOOK3                 0.476   golgi-associated microtubule-binding protein HOOK3 [...
HOOK1                 0.443   hook homolog 1 
CCDC88C               0.080   DVL-binding protein DAPLE 
CCDC88A               0.076   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.076   coiled-coil domain containing 88A isoform 1 
MYH9                  0.057   myosin, heavy polypeptide 9, non-muscle 
CGN                   0.057   cingulin 
CEP250                0.056   centrosomal protein 2 
PLEC1                 0.054   plectin 1 isoform 11 
PLEC1                 0.054   plectin 1 isoform 10 
PLEC1                 0.054   plectin 1 isoform 8 
PLEC1                 0.054   plectin 1 isoform 7 
PLEC1                 0.054   plectin 1 isoform 6 
PLEC1                 0.054   plectin 1 isoform 3 
PLEC1                 0.054   plectin 1 isoform 2 
PLEC1                 0.054   plectin 1 isoform 1 
MYH14                 0.052   myosin, heavy chain 14 isoform 1 
MYH14                 0.052   myosin, heavy chain 14 isoform 2 
MYH14                 0.052   myosin, heavy chain 14 isoform 3 
EEA1                  0.051   early endosome antigen 1, 162kD 
TCHH                  0.049   trichohyalin 
NUMA1                 0.048   nuclear mitotic apparatus protein 1 
MYH10                 0.047   myosin, heavy polypeptide 10, non-muscle 
MYH13                 0.046   myosin, heavy polypeptide 13, skeletal muscle [Homo...
CROCC                 0.046   ciliary rootlet coiled-coil 
LOC440243             0.046   PREDICTED: Putative golgin subfamily A member 6-lik...
LOC283685             0.046   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC100133758          0.045   PREDICTED: hypothetical protein, partial 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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