Guide to the Human Genome
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Name: TNNI2 Sequence: fasta or formatted (182aa) NCBI GI: 224967106
Description:

fast-twitch skeletal muscle troponin I isoform 2

Referenced in:

Muscle

Other entries for this name:
alt prot [182aa] fast-twitch skeletal muscle troponin I isoform 1
alt prot [182aa] fast-twitch skeletal muscle troponin I isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         13           2
 C cysteine            2.2          4           1
 D aspartate           5.5         10           1
 E glutamate          12.6         23           3
 F phenylalanine       1.6          3           1
 G glycine             3.3          6           1
 H histidine           2.7          5           1
 I isoleucine          2.7          5           1
 K lysine             13.2         24           2
 L leucine             9.3         17           2
 M methionine          5.5         10           1
 N asparagine          2.7          5           1
 P proline             2.7          5           2
 Q glutamine           4.9          9           1
 R arginine            9.3         17           2
 S serine              6.0         11           1
 T threonine           2.2          4           1
 V valine              4.4          8           1
 W tryptophan          0.5          1           1
 Y tyrosine            1.1          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fast-twitch skeletal muscle troponin I isoform 2 [H... 
TNNI2                 0.970   fast-twitch skeletal muscle troponin I isoform 1 [Hom...
TNNI2                 0.970   fast-twitch skeletal muscle troponin I isoform 1 [H...
TNNI1                 0.538   troponin I, skeletal, slow 
TNNI3                 0.533   troponin I, cardiac 
KTN1                  0.050   kinectin 1 isoform a 
KTN1                  0.050   kinectin 1 isoform c 
KTN1                  0.050   kinectin 1 isoform a 
HOOK1                 0.050   hook homolog 1 
PPFIA1                0.044   PTPRF interacting protein alpha 1 isoform a 
PPFIA1                0.044   PTPRF interacting protein alpha 1 isoform b 
KIF3A                 0.041   kinesin family member 3A 
PPFIA2                0.041   PTPRF interacting protein alpha 2 
MYH6                  0.036   myosin heavy chain 6 
MYH7                  0.036   myosin, heavy chain 7, cardiac muscle, beta 
CCDC19                0.036   nasopharyngeal epithelium specific protein 1 
C6orf97               0.036   hypothetical protein LOC80129 
LOC283685             0.036   PREDICTED: golgi autoantigen, golgin subfamily a-li...
CROCC                 0.036   ciliary rootlet coiled-coil 
MYH7B                 0.036   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
CTTNBP2               0.036   cortactin binding protein 2 
LOC653073             0.033   PREDICTED: Golgin subfamily A member 8-like protein...
MYH3                  0.033   myosin, heavy chain 3, skeletal muscle, embryonic [H...
MYH4                  0.030   myosin, heavy polypeptide 4, skeletal muscle 
CLIP1                 0.030   restin isoform b 
CLIP1                 0.030   restin isoform a 
FLJ44817              0.030   similar to pleckstrin homology domain protein (5V32...
NDEL1                 0.030   nudE nuclear distribution gene E homolog (A. nidulan...
NDEL1                 0.030   nudE nuclear distribution gene E homolog (A. nidulan...
MYH1                  0.030   myosin, heavy chain 1, skeletal muscle, adult [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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