Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: HOOK2 Sequence: fasta or formatted (719aa) NCBI GI: 154354985
Description:

hook homolog 2 isoform 1

Referenced in:

Tubulins and Microtubules

Other entries for this name:
alt prot [717aa] hook homolog 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         59           2
 C cysteine            1.4         10           1
 D aspartate           4.6         33           1
 E glutamate          13.8         99           2
 F phenylalanine       1.3          9           1
 G glycine             4.0         29           2
 H histidine           2.4         17           1
 I isoleucine          1.9         14           1
 K lysine              4.3         31           2
 L leucine            14.9        107           4
 M methionine          2.2         16           1
 N asparagine          2.6         19           1
 P proline             3.8         27           2
 Q glutamine           9.0         65           3
 R arginine           10.4         75           3
 S serine              6.3         45           2
 T threonine           3.5         25           1
 V valine              3.2         23           2
 W tryptophan          0.8          6           1
 Y tyrosine            1.4         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hook homolog 2 isoform 1 
HOOK2                 0.994   hook homolog 2 isoform 2 
HOOK3                 0.472   golgi-associated microtubule-binding protein HOOK3 [...
HOOK1                 0.445   hook homolog 1 
CCDC88C               0.079   DVL-binding protein DAPLE 
CCDC88A               0.076   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.076   coiled-coil domain containing 88A isoform 1 
CGN                   0.056   cingulin 
MYH9                  0.055   myosin, heavy polypeptide 9, non-muscle 
CEP250                0.055   centrosomal protein 2 
PLEC1                 0.051   plectin 1 isoform 11 
PLEC1                 0.051   plectin 1 isoform 10 
PLEC1                 0.051   plectin 1 isoform 8 
PLEC1                 0.051   plectin 1 isoform 7 
PLEC1                 0.051   plectin 1 isoform 6 
PLEC1                 0.051   plectin 1 isoform 3 
PLEC1                 0.051   plectin 1 isoform 2 
PLEC1                 0.051   plectin 1 isoform 1 
MYH14                 0.051   myosin, heavy chain 14 isoform 1 
MYH14                 0.051   myosin, heavy chain 14 isoform 2 
MYH14                 0.051   myosin, heavy chain 14 isoform 3 
EEA1                  0.051   early endosome antigen 1, 162kD 
MYH13                 0.048   myosin, heavy polypeptide 13, skeletal muscle [Homo...
TCHH                  0.048   trichohyalin 
MYH10                 0.047   myosin, heavy polypeptide 10, non-muscle 
MYH11                 0.046   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.046   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.046   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.046   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
LOC283685             0.046   PREDICTED: golgi autoantigen, golgin subfamily a-li...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press