Guide to the Human Genome
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Name: EVI5 Sequence: fasta or formatted (810aa) NCBI GI: 68299759
Description:

ecotropic viral integration site 5

Referenced in:

Rab

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         46           2
 C cysteine            1.2         10           1
 D aspartate           4.2         34           2
 E glutamate          10.9         88           3
 F phenylalanine       3.3         27           2
 G glycine             3.7         30           1
 H histidine           2.7         22           2
 I isoleucine          4.7         38           1
 K lysine              7.3         59           3
 L leucine            11.0         89           3
 M methionine          3.6         29           2
 N asparagine          4.0         32           2
 P proline             3.2         26           2
 Q glutamine           7.0         57           2
 R arginine            5.6         45           3
 S serine              9.3         75           4
 T threonine           4.4         36           2
 V valine              5.6         45           2
 W tryptophan          1.0          8           1
 Y tyrosine            1.7         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ecotropic viral integration site 5 
EVI5L                 0.618   ecotropic viral integration site 5-like isoform 2 [H...
EVI5L                 0.615   ecotropic viral integration site 5-like isoform 1 [...
RABGAP1               0.156   RAB GTPase activating protein 1 
RABGAP1L              0.141   RAB GTPase activating protein 1-like isoform A [Homo...
TBC1D4                0.100   TBC1 domain family, member 4 
TBC1D1                0.100   TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member...
USP6NL                0.081   USP6 N-terminal like isoform 1 
USP6NL                0.081   USP6 N-terminal like isoform 2 
TBC1D10C              0.075   TBC1 domain family, member 10C 
TBC1D10A              0.066   TBC1 domain family, member 10A 
TBC1D10B              0.066   TBC1 domain family, member 10B 
TBC1D12               0.062   TBC1 domain family, member 12 
SGSM3                 0.061   small G protein signaling modulator 3 
TBC1D8B               0.060   TBC1 domain family, member 8B (with GRAM domain) iso...
TBC1D2B               0.058   TBC1 domain family, member 2B isoform a 
TBC1D2B               0.057   TBC1 domain family, member 2B isoform b 
TBC1D9                0.055   TBC1 domain family, member 9 (with GRAM domain) [Ho...
TBC1D9B               0.053   TBC1 domain family, member 9B (with GRAM domain) iso...
TBC1D9B               0.053   TBC1 domain family, member 9B (with GRAM domain) iso...
GRTP1                 0.052   growth hormone regulated TBC protein 1 
TBC1D14               0.052   TBC1 domain family, member 14 isoform b 
TBC1D14               0.052   TBC1 domain family, member 14 isoform a 
TBC1D14               0.052   TBC1 domain family, member 14 isoform a 
TBC1D8                0.051   TBC1 domain family, member 8 
USP6                  0.044   ubiquitin specific protease 6 
TBC1D3H               0.040   TBC1 domain family, member 3H 
TBC1D3G               0.040   TBC1 domain family, member 3G 
TBC1D3F               0.040   TBC1 domain family, member 3F 
TBC1D3                0.040   TBC1 domain family, member 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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