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Search of human proteins with 56682966
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|56682966 transforming growth factor, beta receptor III [Homo
sapiens]
(851 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|56682966 transforming growth factor, beta receptor III [Homo ... 1731 0.0
gi|113428456 PREDICTED: similar to mCG141871 [Homo sapiens] 94 4e-19
gi|239757128 PREDICTED: similar to mCG141871 [Homo sapiens] 93 1e-18
gi|113428072 PREDICTED: similar to mCG141871 [Homo sapiens] 93 1e-18
gi|168693647 endoglin isoform 1 precursor [Homo sapiens] 86 2e-16
gi|30520377 CUB and zona pellucida-like domains 1 [Homo sapiens] 61 5e-09
gi|239755390 PREDICTED: similar to DMBT1 isoform 1 [Homo sapiens] 56 1e-07
gi|239755388 PREDICTED: similar to DMBT1 isoform 2 [Homo sapiens] 56 1e-07
gi|148539844 deleted in malignant brain tumors 1 isoform c precu... 56 1e-07
gi|148539842 deleted in malignant brain tumors 1 isoform b precu... 56 1e-07
gi|148539840 deleted in malignant brain tumors 1 isoform a precu... 56 1e-07
gi|4557555 endoglin isoform 2 precursor [Homo sapiens] 56 2e-07
gi|22749297 oncoprotein-induced transcript 3 [Homo sapiens] 53 1e-06
gi|145580584 uromodulin-like 1 isoform 1 precursor [Homo sapiens] 50 9e-06
gi|145580582 uromodulin-like 1 isoform 2 precursor [Homo sapiens] 50 9e-06
gi|28372569 zona pellucida-like domain containing 1 [Homo sapiens] 49 2e-05
gi|56550049 uromodulin precursor [Homo sapiens] 42 0.002
gi|59850812 uromodulin precursor [Homo sapiens] 42 0.002
gi|10863987 zona pellucida glycoprotein 4 preproprotein [Homo sa... 39 0.016
gi|4508045 zona pellucida glycoprotein 2 preproprotein [Homo sap... 38 0.035
gi|27764867 synaptophysin [Homo sapiens] 36 0.17
gi|119220571 zymogen granule membrane glycoprotein 2 isoform 2 [... 35 0.38
gi|119220569 zymogen granule membrane glycoprotein 2 isoform 1 [... 35 0.38
gi|119220573 zymogen granule membrane glycoprotein 2 isoform 4 [... 35 0.38
gi|119220572 zymogen granule membrane glycoprotein 2 isoform 3 [... 35 0.38
gi|148536825 alpha 1 type IV collagen preproprotein [Homo sapiens] 34 0.50
gi|73486666 alpha 1 type IX collagen isoform 1 precursor [Homo s... 34 0.66
gi|73486664 alpha 1 type IX collagen isoform 2 precursor [Homo s... 34 0.66
gi|194018518 synaptoporin isoform 1 [Homo sapiens] 33 0.86
gi|21389481 synaptoporin isoform 2 [Homo sapiens] 33 0.86
>gi|56682966 transforming growth factor, beta receptor III [Homo
sapiens]
Length = 851
Score = 1731 bits (4482), Expect = 0.0
Identities = 851/851 (100%), Positives = 851/851 (100%)
Query: 1 MTSHYVIAIFALMSSCLATAGPEPGALCELSPVSASHPVQALMESFTVLSGCASRGTTGL 60
MTSHYVIAIFALMSSCLATAGPEPGALCELSPVSASHPVQALMESFTVLSGCASRGTTGL
Sbjct: 1 MTSHYVIAIFALMSSCLATAGPEPGALCELSPVSASHPVQALMESFTVLSGCASRGTTGL 60
Query: 61 PQEVHVLNLRTAGQGPGQLQREVTLHLNPISSVHIHHKSVVFLLNSPHPLVWHLKTERLA 120
PQEVHVLNLRTAGQGPGQLQREVTLHLNPISSVHIHHKSVVFLLNSPHPLVWHLKTERLA
Sbjct: 61 PQEVHVLNLRTAGQGPGQLQREVTLHLNPISSVHIHHKSVVFLLNSPHPLVWHLKTERLA 120
Query: 121 TGVSRLFLVSEGSVVQFSSANFSLTAETEERNFPHGNEHLLNWARKEYGAVTSFTELKIA 180
TGVSRLFLVSEGSVVQFSSANFSLTAETEERNFPHGNEHLLNWARKEYGAVTSFTELKIA
Sbjct: 121 TGVSRLFLVSEGSVVQFSSANFSLTAETEERNFPHGNEHLLNWARKEYGAVTSFTELKIA 180
Query: 181 RNIYIKVGEDQVFPPKCNIGKNFLSLNYLAEYLQPKAAEGCVMSSQPQNEEVHIIELITP 240
RNIYIKVGEDQVFPPKCNIGKNFLSLNYLAEYLQPKAAEGCVMSSQPQNEEVHIIELITP
Sbjct: 181 RNIYIKVGEDQVFPPKCNIGKNFLSLNYLAEYLQPKAAEGCVMSSQPQNEEVHIIELITP 240
Query: 241 NSNPYSAFQVDITIDIRPSQEDLEVVKNLILILKCKKSVNWVIKSFDVKGSLKIIAPNSI 300
NSNPYSAFQVDITIDIRPSQEDLEVVKNLILILKCKKSVNWVIKSFDVKGSLKIIAPNSI
Sbjct: 241 NSNPYSAFQVDITIDIRPSQEDLEVVKNLILILKCKKSVNWVIKSFDVKGSLKIIAPNSI 300
Query: 301 GFGKESERSMTMTKSIRDDIPSTQGNLVKWALDNGYSPITSYTMAPVANRFHLRLENNAE 360
GFGKESERSMTMTKSIRDDIPSTQGNLVKWALDNGYSPITSYTMAPVANRFHLRLENNAE
Sbjct: 301 GFGKESERSMTMTKSIRDDIPSTQGNLVKWALDNGYSPITSYTMAPVANRFHLRLENNAE 360
Query: 361 EMGDEEVHTIPPELRILLDPGALPALQNPPIRGGEGQNGGLPFPFPDISRRVWNEEGEDG 420
EMGDEEVHTIPPELRILLDPGALPALQNPPIRGGEGQNGGLPFPFPDISRRVWNEEGEDG
Sbjct: 361 EMGDEEVHTIPPELRILLDPGALPALQNPPIRGGEGQNGGLPFPFPDISRRVWNEEGEDG 420
Query: 421 LPRPKDPVIPSIQLFPGLREPEEVQGSVDIALSVKCDNEKMIVAVEKDSFQASGYSGMDV 480
LPRPKDPVIPSIQLFPGLREPEEVQGSVDIALSVKCDNEKMIVAVEKDSFQASGYSGMDV
Sbjct: 421 LPRPKDPVIPSIQLFPGLREPEEVQGSVDIALSVKCDNEKMIVAVEKDSFQASGYSGMDV 480
Query: 481 TLLDPTCKAKMNGTHFVLESPLNGCGTRPRWSALDGVVYYNSIVIQVPALGDSSGWPDGY 540
TLLDPTCKAKMNGTHFVLESPLNGCGTRPRWSALDGVVYYNSIVIQVPALGDSSGWPDGY
Sbjct: 481 TLLDPTCKAKMNGTHFVLESPLNGCGTRPRWSALDGVVYYNSIVIQVPALGDSSGWPDGY 540
Query: 541 EDLESGDNGFPGDMDEGDASLFTRPEIVVFNCSLQQVRNPSSFQEQPHGNITFNMELYNT 600
EDLESGDNGFPGDMDEGDASLFTRPEIVVFNCSLQQVRNPSSFQEQPHGNITFNMELYNT
Sbjct: 541 EDLESGDNGFPGDMDEGDASLFTRPEIVVFNCSLQQVRNPSSFQEQPHGNITFNMELYNT 600
Query: 601 DLFLVPSQGVFSVPENGHVYVEVSVTKAEQELGFAIQTCFISPYSNPDRMSHYTIIENIC 660
DLFLVPSQGVFSVPENGHVYVEVSVTKAEQELGFAIQTCFISPYSNPDRMSHYTIIENIC
Sbjct: 601 DLFLVPSQGVFSVPENGHVYVEVSVTKAEQELGFAIQTCFISPYSNPDRMSHYTIIENIC 660
Query: 661 PKDESVKFYSPKRVHFPIPQADMDKKRFSFVFKPVFNTSLLFLQCELTLCTKMEKHPQKL 720
PKDESVKFYSPKRVHFPIPQADMDKKRFSFVFKPVFNTSLLFLQCELTLCTKMEKHPQKL
Sbjct: 661 PKDESVKFYSPKRVHFPIPQADMDKKRFSFVFKPVFNTSLLFLQCELTLCTKMEKHPQKL 720
Query: 721 PKCVPPDEACTSLDASIIWAMMQNKKTFTKPLAVIHHEAESKEKGPSMKEPNPISPPIFH 780
PKCVPPDEACTSLDASIIWAMMQNKKTFTKPLAVIHHEAESKEKGPSMKEPNPISPPIFH
Sbjct: 721 PKCVPPDEACTSLDASIIWAMMQNKKTFTKPLAVIHHEAESKEKGPSMKEPNPISPPIFH 780
Query: 781 GLDTLTVMGIAFAAFVIGALLTGALWYIYSHTGETAGRQQVPTSPPASENSSAAHSIGST 840
GLDTLTVMGIAFAAFVIGALLTGALWYIYSHTGETAGRQQVPTSPPASENSSAAHSIGST
Sbjct: 781 GLDTLTVMGIAFAAFVIGALLTGALWYIYSHTGETAGRQQVPTSPPASENSSAAHSIGST 840
Query: 841 QSTPCSSSSTA 851
QSTPCSSSSTA
Sbjct: 841 QSTPCSSSSTA 851
>gi|113428456 PREDICTED: similar to mCG141871 [Homo sapiens]
Length = 358
Score = 94.4 bits (233), Expect = 4e-19
Identities = 73/246 (29%), Positives = 110/246 (44%), Gaps = 20/246 (8%)
Query: 593 FNMELYNTDLFLVPSQGVFSVPENGHVYVEVSVTKAEQELGFAIQTCFISPYSNPDRMSH 652
F+++L +T+ G VP + V+V+ ++ + G A+ C ++P S P
Sbjct: 115 FSLKLSDTEDVFPRRAGPLEVPADSRVFVQAALARPSPRWGLALHRCSVTPSSRPAPGPA 174
Query: 653 YTIIENICPKDESVKFYSPKRVHFPIPQADMDKKRFSFVFKPVFNTSLLFLQCELTLCTK 712
++ CP D SV F P P P A RFSF +PVFN S+ FL C+L+ C +
Sbjct: 175 LALLREGCPADTSVAFPPPPP---PSPGA-ARPARFSFRLRPVFNASVQFLHCQLSRCRR 230
Query: 713 ME----------KHPQKLP-KCVPPDEACT---SLDASIIWAMMQNKKTFTKPLAV-IHH 757
+ P LP +C+P DEAC S A + A + T T+P+ V +
Sbjct: 231 LRGVRRAPAHLTPPPPPLPSRCLPQDEACADTGSGSAEGLAADGPHLHTLTQPIVVTVPR 290
Query: 758 EAESKEKGPSMKEPNPISP-PIFHGLDTLTVMGIAFAAFVIGALLTGALWYIYSHTGETA 816
K + P P P L+ V+ + AAFV+GA L L + +H+G
Sbjct: 291 PPPRPPKSVPGRAVRPEPPAPAPAALEPAPVVALVLAAFVLGAALAAGLGLVCAHSGTDD 350
Query: 817 GRQQVP 822
RQ P
Sbjct: 351 LRQAGP 356
>gi|239757128 PREDICTED: similar to mCG141871 [Homo sapiens]
Length = 306
Score = 92.8 bits (229), Expect = 1e-18
Identities = 71/246 (28%), Positives = 108/246 (43%), Gaps = 20/246 (8%)
Query: 593 FNMELYNTDLFLVPSQGVFSVPENGHVYVEVSVTKAEQELGFAIQTCFISPYSNPDRMSH 652
F+++L +T+ G VP + V+V+ ++ + G A+ C ++P S P
Sbjct: 63 FSLKLSDTEDVFPRRAGPLEVPADSRVFVQAALARPSPRWGLALHRCSVTPSSRPAPGPA 122
Query: 653 YTIIENICPKDESVKFYSPKRVHFPIPQADMDKKRFSFVFKPVFNTSLLFLQCELTLCTK 712
++ CP D SV F P P P A RFSF +PVFN S+ FL C+L+ C +
Sbjct: 123 LALLREGCPADTSVAFPPPPP---PSPGA-ARPARFSFRLRPVFNASVQFLHCQLSRCRR 178
Query: 713 ME-----------KHPQKLPKCVPPDEACT---SLDASIIWAMMQNKKTFTKPLAV-IHH 757
+ P +C+P DEAC S A + A + T T+P+ V +
Sbjct: 179 LRGVRRAPAPLTPPPPPPPSRCLPQDEACADTGSGSAEGLAADGPHLHTLTQPIVVTVPR 238
Query: 758 EAESKEKGPSMKEPNPISP-PIFHGLDTLTVMGIAFAAFVIGALLTGALWYIYSHTGETA 816
K + P P P L+ V+ + AAFV+GA L L + +H+G
Sbjct: 239 PPPRPPKSVPGRAVRPEPPAPAPAALEPAPVVALVLAAFVLGAALAAGLGLVCAHSGTDD 298
Query: 817 GRQQVP 822
RQ P
Sbjct: 299 LRQAGP 304
>gi|113428072 PREDICTED: similar to mCG141871 [Homo sapiens]
Length = 358
Score = 92.8 bits (229), Expect = 1e-18
Identities = 71/246 (28%), Positives = 108/246 (43%), Gaps = 20/246 (8%)
Query: 593 FNMELYNTDLFLVPSQGVFSVPENGHVYVEVSVTKAEQELGFAIQTCFISPYSNPDRMSH 652
F+++L +T+ G VP + V+V+ ++ + G A+ C ++P S P
Sbjct: 115 FSLKLSDTEDVFPRRAGPLEVPADSRVFVQAALARPSPRWGLALHRCSVTPSSRPAPGPA 174
Query: 653 YTIIENICPKDESVKFYSPKRVHFPIPQADMDKKRFSFVFKPVFNTSLLFLQCELTLCTK 712
++ CP D SV F P P P A RFSF +PVFN S+ FL C+L+ C +
Sbjct: 175 LALLREGCPADTSVAFPPPPP---PSPGA-ARPARFSFRLRPVFNASVQFLHCQLSRCRR 230
Query: 713 ME-----------KHPQKLPKCVPPDEACT---SLDASIIWAMMQNKKTFTKPLAV-IHH 757
+ P +C+P DEAC S A + A + T T+P+ V +
Sbjct: 231 LRGVRRAPAPLTPPPPPPPSRCLPQDEACADTGSGSAEGLAADGPHLHTLTQPIVVTVPR 290
Query: 758 EAESKEKGPSMKEPNPISP-PIFHGLDTLTVMGIAFAAFVIGALLTGALWYIYSHTGETA 816
K + P P P L+ V+ + AAFV+GA L L + +H+G
Sbjct: 291 PPPRPPKSVPGRAVRPEPPAPAPAALEPAPVVALVLAAFVLGAALAAGLGLVCAHSGTDD 350
Query: 817 GRQQVP 822
RQ P
Sbjct: 351 LRQAGP 356
>gi|168693647 endoglin isoform 1 precursor [Homo sapiens]
Length = 658
Score = 85.5 bits (210), Expect = 2e-16
Identities = 49/86 (56%), Positives = 58/86 (67%), Gaps = 6/86 (6%)
Query: 772 NPISPPIF----HGLDTLTVMGIAFAAFVIGALLTGALWYIYSHTGETAGRQQV--PTSP 825
N ISP + GL V+GI F AF+IGALLT ALWYIYSHT + R+ V +P
Sbjct: 573 NIISPDLSGCTSKGLVLPAVLGITFGAFLIGALLTAALWYIYSHTRSPSKREPVVAVAAP 632
Query: 826 PASENSSAAHSIGSTQSTPCSSSSTA 851
+SE+SS HSIGSTQSTPCS+SS A
Sbjct: 633 ASSESSSTNHSIGSTQSTPCSTSSMA 658
Score = 55.8 bits (133), Expect = 2e-07
Identities = 89/372 (23%), Positives = 150/372 (40%), Gaps = 37/372 (9%)
Query: 7 IAIFALMSSC-LATAGPEPGALCELSPVSASHPVQALMESFTVLSGCASRGTTGLPQEVH 65
+A+ L++SC L+ C+L PV + + V GC ++ + EVH
Sbjct: 8 LAVALLLASCSLSPTSLAETVHCDLQPVGPERG-EVTYTTSQVSKGCVAQAPNAI-LEVH 65
Query: 66 VLNLRTAGQGPGQLQREVTLHLNPISSVHIHHKSVVFLLNSPHPLVWHLKTERLATGVSR 125
VL L GP QL E+TL + + +V +NS + HL+ A G+
Sbjct: 66 VLFLEFP-TGPSQL--ELTLQASKQNGTWPREVLLVLSVNSS--VFLHLQ----ALGIP- 115
Query: 126 LFLVSEGSVVQFSSANFSLTAETEERNFPHGNEHLLNWARKEYGAVTSFTELKIARNIYI 185
L L S+V F T TE +FP +L WA E G +TS EL ++I +
Sbjct: 116 LHLAYNSSLVTFQEPPGVNT--TELPSFP--KTQILEWAA-ERGPITSAAELNDPQSILL 170
Query: 186 KVGEDQVFPPKCNIGKNFLSLNYLAEYLQ--PKAAEGCVMSSQPQNEEVHIIELITPNSN 243
++G+ Q C + + + E+ P GC + ++E HI+ ++ +S
Sbjct: 171 RLGQAQGSLSFCMLEAS-QDMGRTLEWRPRTPALVRGCHLEGVAGHKEAHILRVLPGHSA 229
Query: 244 PYSAFQVDITIDIRPSQEDLEVVKNLILILKCKKSVNWVIKSFDVKGSLKIIAPNSIGFG 303
V + + P D +LIL+ V+W+I D +++I F
Sbjct: 230 GPRTVTVKVELSCAPGDLD------AVLILQGPPYVSWLI---DANHNMQIWTTGEYSFK 280
Query: 304 KESERSMTMTKSIRDDIPSTQGNLVKWALDNGYSPITSYTMAPVAN--RFHLRLENNAEE 361
E+++ K +P T L+ A S + S+ P+A+ H +
Sbjct: 281 IFPEKNIRGFK-----LPDTPQGLLGEARMLNASIVASFVELPLASIVSLHASSCGGRLQ 335
Query: 362 MGDEEVHTIPPE 373
+ T PP+
Sbjct: 336 TSPAPIQTTPPK 347
Score = 35.8 bits (81), Expect = 0.17
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 452 LSVKCDNEKMIVAVEKDSFQASGYSGMDVTLLDPTCKAKMNGTHFVLESPLNGCGTRPRW 511
+ KC ++ M + ++K+ + +T DP+C+A+ G FVL S + CG +
Sbjct: 359 IQTKCADDAMTLVLKKELVAHLKCTITGLTFWDPSCEAEDRGDKFVLRSAYSSCGMQVSA 418
Query: 512 SALDGVVYYNSIVIQVP 528
S + N + P
Sbjct: 419 SMISNEAVVNILSSSSP 435
>gi|30520377 CUB and zona pellucida-like domains 1 [Homo sapiens]
Length = 607
Score = 60.8 bits (146), Expect = 5e-09
Identities = 63/274 (22%), Positives = 116/274 (42%), Gaps = 32/274 (11%)
Query: 453 SVKCDNEKMIVAVEKDSFQASGYSGMDVTLLDPTCKAKMNGTHFVLESPLNGCGTRPRWS 512
S+ C +++M V + K +A +G ++ L DPTC+ K++ PLNGCGT R
Sbjct: 274 SLTCSSDRMRVIISKSYLEAFNSNGNNLQLKDPTCRPKLSNV-VEFSVPLNGCGT-IRKV 331
Query: 513 ALDGVVYYNSIVIQVPALGDSSGWPDGYEDLESGDNGFPGDMDEGDASLFTRPEIVVFNC 572
+ Y N I + + + + + G + + T +++
Sbjct: 332 EDQSITYTNIITFSASSTSEVITRQKQLQIIVKCEMGHNSTV---EIIYITEDDVIQSQN 388
Query: 573 SLQQVRNPSSFQEQPHGNITFNMELYNTDLF-LVPSQGVFSVPENGHVYVEVSVTKAEQE 631
+L G +M L+ ++ F + + V N ++V+VS+ ++
Sbjct: 389 AL--------------GKYNTSMALFESNSFEKTILESPYYVDLNQTLFVQVSLHTSDPN 434
Query: 632 LGFAIQTCFISPYSNPDRMSHYTIIENICPKDESVKFYSPKRVHFPIPQADMDKKRFSF- 690
L + TC SP S+ Y +I++ C +DE+ K Y P H+ RF F
Sbjct: 435 LVVFLDTCRASPTSD-FASPTYDLIKSGCSRDETCKVY-PLFGHY---------GRFQFN 483
Query: 691 VFKPVFNTSLLFLQCELTLCTKMEKHPQKLPKCV 724
FK + + S ++LQC++ +C + + CV
Sbjct: 484 AFKFLRSMSSVYLQCKVLICDSSDHQSRCNQGCV 517
>gi|239755390 PREDICTED: similar to DMBT1 isoform 1 [Homo sapiens]
Length = 1662
Score = 56.2 bits (134), Expect = 1e-07
Identities = 63/275 (22%), Positives = 111/275 (40%), Gaps = 28/275 (10%)
Query: 456 CDNEKMIVAVEKDSFQASGYSGMDVTLLDPT----CKAKMNGTHFVLESPLNGCGTRPRW 511
C M +V + Q+ G+S D+ + C+ ++ + P +GCGT +
Sbjct: 1376 CLPNHMQASVSRSYLQSLGFSASDLVISTWNGYYECRPQITPNLVIFTIPYSGCGTFKQ- 1434
Query: 512 SALDGVVYYNSIVIQVPALGDSSGWPDGYEDLESGDNGFPGDMDEGDASLFTRPEIVVFN 571
+ D + Y N + V S G DL + D I V N
Sbjct: 1435 ADNDTIDYSNFLTAAV-----SGGIIKRRTDLRIHVSCRMLQNTWVDTMYIANDTIHVAN 1489
Query: 572 CSLQQVRNPSSFQEQPHGNITFNMELYNTDLFLVP-SQGVFSVPENGHVYVEVSVTKAEQ 630
++Q +E +GN N+ Y + FL P + + V N +YV+ + ++
Sbjct: 1490 NTIQ-------VEEVQYGNFDVNISFYTSSSFLYPVTSRPYYVDLNQDLYVQAEILHSDA 1542
Query: 631 ELGFAIQTCFISPYSNPDRMSHYTIIENICPKDESVKFYSPKRVHFPIPQADMDKKRF-S 689
L + TC SPYSN Y +I + C +D++ Y P + P + + RF +
Sbjct: 1543 VLTLFVDTCVASPYSNDFTSLTYDLIRSGCVRDDT---YGP----YSSPSLRIARFRFRA 1595
Query: 690 FVFKPVFNTSLLFLQCELTLCTKMEKHPQKLPKCV 724
F F F + ++L+C++ +C + + CV
Sbjct: 1596 FHFLNRFPS--VYLRCKMVVCRAYDPSSRCYRGCV 1628
>gi|239755388 PREDICTED: similar to DMBT1 isoform 2 [Homo sapiens]
Length = 1788
Score = 56.2 bits (134), Expect = 1e-07
Identities = 63/275 (22%), Positives = 111/275 (40%), Gaps = 28/275 (10%)
Query: 456 CDNEKMIVAVEKDSFQASGYSGMDVTLLDPT----CKAKMNGTHFVLESPLNGCGTRPRW 511
C M +V + Q+ G+S D+ + C+ ++ + P +GCGT +
Sbjct: 1502 CLPNHMQASVSRSYLQSLGFSASDLVISTWNGYYECRPQITPNLVIFTIPYSGCGTFKQ- 1560
Query: 512 SALDGVVYYNSIVIQVPALGDSSGWPDGYEDLESGDNGFPGDMDEGDASLFTRPEIVVFN 571
+ D + Y N + V S G DL + D I V N
Sbjct: 1561 ADNDTIDYSNFLTAAV-----SGGIIKRRTDLRIHVSCRMLQNTWVDTMYIANDTIHVAN 1615
Query: 572 CSLQQVRNPSSFQEQPHGNITFNMELYNTDLFLVP-SQGVFSVPENGHVYVEVSVTKAEQ 630
++Q +E +GN N+ Y + FL P + + V N +YV+ + ++
Sbjct: 1616 NTIQ-------VEEVQYGNFDVNISFYTSSSFLYPVTSRPYYVDLNQDLYVQAEILHSDA 1668
Query: 631 ELGFAIQTCFISPYSNPDRMSHYTIIENICPKDESVKFYSPKRVHFPIPQADMDKKRF-S 689
L + TC SPYSN Y +I + C +D++ Y P + P + + RF +
Sbjct: 1669 VLTLFVDTCVASPYSNDFTSLTYDLIRSGCVRDDT---YGP----YSSPSLRIARFRFRA 1721
Query: 690 FVFKPVFNTSLLFLQCELTLCTKMEKHPQKLPKCV 724
F F F + ++L+C++ +C + + CV
Sbjct: 1722 FHFLNRFPS--VYLRCKMVVCRAYDPSSRCYRGCV 1754
>gi|148539844 deleted in malignant brain tumors 1 isoform c precursor
[Homo sapiens]
Length = 2403
Score = 56.2 bits (134), Expect = 1e-07
Identities = 63/275 (22%), Positives = 111/275 (40%), Gaps = 28/275 (10%)
Query: 456 CDNEKMIVAVEKDSFQASGYSGMDVTLLDPT----CKAKMNGTHFVLESPLNGCGTRPRW 511
C M +V + Q+ G+S D+ + C+ ++ + P +GCGT +
Sbjct: 2117 CLPNHMQASVSRSYLQSLGFSASDLVISTWNGYYECRPQITPNLVIFTIPYSGCGTFKQ- 2175
Query: 512 SALDGVVYYNSIVIQVPALGDSSGWPDGYEDLESGDNGFPGDMDEGDASLFTRPEIVVFN 571
+ D + Y N + V S G DL + D I V N
Sbjct: 2176 ADNDTIDYSNFLTAAV-----SGGIIKRRTDLRIHVSCRMLQNTWVDTMYIANDTIHVAN 2230
Query: 572 CSLQQVRNPSSFQEQPHGNITFNMELYNTDLFLVP-SQGVFSVPENGHVYVEVSVTKAEQ 630
++Q +E +GN N+ Y + FL P + + V N +YV+ + ++
Sbjct: 2231 NTIQ-------VEEVQYGNFDVNISFYTSSSFLYPVTSRPYYVDLNQDLYVQAEILHSDA 2283
Query: 631 ELGFAIQTCFISPYSNPDRMSHYTIIENICPKDESVKFYSPKRVHFPIPQADMDKKRF-S 689
L + TC SPYSN Y +I + C +D++ Y P + P + + RF +
Sbjct: 2284 VLTLFVDTCVASPYSNDFTSLTYDLIRSGCVRDDT---YGP----YSSPSLRIARFRFRA 2336
Query: 690 FVFKPVFNTSLLFLQCELTLCTKMEKHPQKLPKCV 724
F F F + ++L+C++ +C + + CV
Sbjct: 2337 FHFLNRFPS--VYLRCKMVVCRAYDPSSRCYRGCV 2369
>gi|148539842 deleted in malignant brain tumors 1 isoform b precursor
[Homo sapiens]
Length = 2413
Score = 56.2 bits (134), Expect = 1e-07
Identities = 63/275 (22%), Positives = 111/275 (40%), Gaps = 28/275 (10%)
Query: 456 CDNEKMIVAVEKDSFQASGYSGMDVTLLDPT----CKAKMNGTHFVLESPLNGCGTRPRW 511
C M +V + Q+ G+S D+ + C+ ++ + P +GCGT +
Sbjct: 2127 CLPNHMQASVSRSYLQSLGFSASDLVISTWNGYYECRPQITPNLVIFTIPYSGCGTFKQ- 2185
Query: 512 SALDGVVYYNSIVIQVPALGDSSGWPDGYEDLESGDNGFPGDMDEGDASLFTRPEIVVFN 571
+ D + Y N + V S G DL + D I V N
Sbjct: 2186 ADNDTIDYSNFLTAAV-----SGGIIKRRTDLRIHVSCRMLQNTWVDTMYIANDTIHVAN 2240
Query: 572 CSLQQVRNPSSFQEQPHGNITFNMELYNTDLFLVP-SQGVFSVPENGHVYVEVSVTKAEQ 630
++Q +E +GN N+ Y + FL P + + V N +YV+ + ++
Sbjct: 2241 NTIQ-------VEEVQYGNFDVNISFYTSSSFLYPVTSRPYYVDLNQDLYVQAEILHSDA 2293
Query: 631 ELGFAIQTCFISPYSNPDRMSHYTIIENICPKDESVKFYSPKRVHFPIPQADMDKKRF-S 689
L + TC SPYSN Y +I + C +D++ Y P + P + + RF +
Sbjct: 2294 VLTLFVDTCVASPYSNDFTSLTYDLIRSGCVRDDT---YGP----YSSPSLRIARFRFRA 2346
Query: 690 FVFKPVFNTSLLFLQCELTLCTKMEKHPQKLPKCV 724
F F F + ++L+C++ +C + + CV
Sbjct: 2347 FHFLNRFPS--VYLRCKMVVCRAYDPSSRCYRGCV 2379
>gi|148539840 deleted in malignant brain tumors 1 isoform a precursor
[Homo sapiens]
Length = 1785
Score = 56.2 bits (134), Expect = 1e-07
Identities = 63/275 (22%), Positives = 111/275 (40%), Gaps = 28/275 (10%)
Query: 456 CDNEKMIVAVEKDSFQASGYSGMDVTLLDPT----CKAKMNGTHFVLESPLNGCGTRPRW 511
C M +V + Q+ G+S D+ + C+ ++ + P +GCGT +
Sbjct: 1499 CLPNHMQASVSRSYLQSLGFSASDLVISTWNGYYECRPQITPNLVIFTIPYSGCGTFKQ- 1557
Query: 512 SALDGVVYYNSIVIQVPALGDSSGWPDGYEDLESGDNGFPGDMDEGDASLFTRPEIVVFN 571
+ D + Y N + V S G DL + D I V N
Sbjct: 1558 ADNDTIDYSNFLTAAV-----SGGIIKRRTDLRIHVSCRMLQNTWVDTMYIANDTIHVAN 1612
Query: 572 CSLQQVRNPSSFQEQPHGNITFNMELYNTDLFLVP-SQGVFSVPENGHVYVEVSVTKAEQ 630
++Q +E +GN N+ Y + FL P + + V N +YV+ + ++
Sbjct: 1613 NTIQ-------VEEVQYGNFDVNISFYTSSSFLYPVTSRPYYVDLNQDLYVQAEILHSDA 1665
Query: 631 ELGFAIQTCFISPYSNPDRMSHYTIIENICPKDESVKFYSPKRVHFPIPQADMDKKRF-S 689
L + TC SPYSN Y +I + C +D++ Y P + P + + RF +
Sbjct: 1666 VLTLFVDTCVASPYSNDFTSLTYDLIRSGCVRDDT---YGP----YSSPSLRIARFRFRA 1718
Query: 690 FVFKPVFNTSLLFLQCELTLCTKMEKHPQKLPKCV 724
F F F + ++L+C++ +C + + CV
Sbjct: 1719 FHFLNRFPS--VYLRCKMVVCRAYDPSSRCYRGCV 1751
>gi|4557555 endoglin isoform 2 precursor [Homo sapiens]
Length = 625
Score = 55.8 bits (133), Expect = 2e-07
Identities = 89/372 (23%), Positives = 150/372 (40%), Gaps = 37/372 (9%)
Query: 7 IAIFALMSSC-LATAGPEPGALCELSPVSASHPVQALMESFTVLSGCASRGTTGLPQEVH 65
+A+ L++SC L+ C+L PV + + V GC ++ + EVH
Sbjct: 8 LAVALLLASCSLSPTSLAETVHCDLQPVGPERG-EVTYTTSQVSKGCVAQAPNAI-LEVH 65
Query: 66 VLNLRTAGQGPGQLQREVTLHLNPISSVHIHHKSVVFLLNSPHPLVWHLKTERLATGVSR 125
VL L GP QL E+TL + + +V +NS + HL+ A G+
Sbjct: 66 VLFLEFP-TGPSQL--ELTLQASKQNGTWPREVLLVLSVNSS--VFLHLQ----ALGIP- 115
Query: 126 LFLVSEGSVVQFSSANFSLTAETEERNFPHGNEHLLNWARKEYGAVTSFTELKIARNIYI 185
L L S+V F T TE +FP +L WA E G +TS EL ++I +
Sbjct: 116 LHLAYNSSLVTFQEPPGVNT--TELPSFP--KTQILEWAA-ERGPITSAAELNDPQSILL 170
Query: 186 KVGEDQVFPPKCNIGKNFLSLNYLAEYLQ--PKAAEGCVMSSQPQNEEVHIIELITPNSN 243
++G+ Q C + + + E+ P GC + ++E HI+ ++ +S
Sbjct: 171 RLGQAQGSLSFCMLEAS-QDMGRTLEWRPRTPALVRGCHLEGVAGHKEAHILRVLPGHSA 229
Query: 244 PYSAFQVDITIDIRPSQEDLEVVKNLILILKCKKSVNWVIKSFDVKGSLKIIAPNSIGFG 303
V + + P D +LIL+ V+W+I D +++I F
Sbjct: 230 GPRTVTVKVELSCAPGDLD------AVLILQGPPYVSWLI---DANHNMQIWTTGEYSFK 280
Query: 304 KESERSMTMTKSIRDDIPSTQGNLVKWALDNGYSPITSYTMAPVAN--RFHLRLENNAEE 361
E+++ K +P T L+ A S + S+ P+A+ H +
Sbjct: 281 IFPEKNIRGFK-----LPDTPQGLLGEARMLNASIVASFVELPLASIVSLHASSCGGRLQ 335
Query: 362 MGDEEVHTIPPE 373
+ T PP+
Sbjct: 336 TSPAPIQTTPPK 347
Score = 51.2 bits (121), Expect = 4e-06
Identities = 28/47 (59%), Positives = 31/47 (65%), Gaps = 4/47 (8%)
Query: 772 NPISPPIF----HGLDTLTVMGIAFAAFVIGALLTGALWYIYSHTGE 814
N ISP + GL V+GI F AF+IGALLT ALWYIYSHT E
Sbjct: 573 NIISPDLSGCTSKGLVLPAVLGITFGAFLIGALLTAALWYIYSHTRE 619
Score = 35.8 bits (81), Expect = 0.17
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 452 LSVKCDNEKMIVAVEKDSFQASGYSGMDVTLLDPTCKAKMNGTHFVLESPLNGCGTRPRW 511
+ KC ++ M + ++K+ + +T DP+C+A+ G FVL S + CG +
Sbjct: 359 IQTKCADDAMTLVLKKELVAHLKCTITGLTFWDPSCEAEDRGDKFVLRSAYSSCGMQVSA 418
Query: 512 SALDGVVYYNSIVIQVP 528
S + N + P
Sbjct: 419 SMISNEAVVNILSSSSP 435
>gi|22749297 oncoprotein-induced transcript 3 [Homo sapiens]
Length = 545
Score = 52.8 bits (125), Expect = 1e-06
Identities = 52/263 (19%), Positives = 102/263 (38%), Gaps = 49/263 (18%)
Query: 477 GMDVTLLDPTCKAKMNGTHFVLESPLNGCGTRPRWSALDGVVYYNSIVIQVPALGDSSGW 536
G+++ L + +C+ NGTH + L CGT ++ + +++V +P S
Sbjct: 284 GLELFLTNTSCRGVSNGTHVNILFSLKTCGTVV--DVVNDKIVASNLVTGLPKQTPGSS- 340
Query: 537 PDGYEDLESGDNGFPGDMDEGDASLFTRPEIVVFNCSLQQV------------RNPSSFQ 584
GD + T ++ C ++ +P
Sbjct: 341 --------------------GDFIIRTSKLLIPVTCEFPRLYTISEGYVPNLRNSPLEIM 380
Query: 585 EQPHGNITFNMELYNTDLFLVP-SQGVFSVPENGHVYVEVSVTKAEQELGFAIQTCFISP 643
+ HG F +E++ + F P + + ++ +Y + L +++CF +P
Sbjct: 381 SRNHGIFPFTLEIFKDNEFEEPYREALPTLKLRDSLYFGIEPVVHVSGLESLVESCFATP 440
Query: 644 YSNPDRMSHYTIIENICPKDESVKFYSPK---RVHFPIPQADMDKKRFSFVFKPVFNTSL 700
S D + Y +I + C D+SVK Y+ + HF +P F FV K +
Sbjct: 441 TSKIDEVLKYYLIRDGCVSDDSVKQYTSRDHLAKHFQVPV-------FKFVGK---DHKE 490
Query: 701 LFLQCELTLCTKMEKHPQKLPKC 723
+FL C + +C +++ + C
Sbjct: 491 VFLHCRVLVCGVLDERSRCAQGC 513
>gi|145580584 uromodulin-like 1 isoform 1 precursor [Homo sapiens]
Length = 1318
Score = 50.1 bits (118), Expect = 9e-06
Identities = 64/267 (23%), Positives = 104/267 (38%), Gaps = 41/267 (15%)
Query: 451 ALSVKCDNEKMIVAVEKDSFQASGYSGMDVTLLDPTCKAK-MNGTHFVLESPLNGCGTRP 509
A+ V C+ EK++VA++K Q + L P+C NGTH +LE+
Sbjct: 988 AVRVLCEIEKVVVAIQKRFLQQESIPESSLYLSHPSCNVSHSNGTHVLLEAG-------- 1039
Query: 510 RWSALDGVVYYN--SIVIQVPALGDSS--GWPDGYEDLESGDNGFPGDMDEGDASLFTRP 565
WS ++ N + V++ D S G + L F D+ +S FT
Sbjct: 1040 -WSECGTLMQSNMTNTVVRTTLRNDLSQEGIIHHLKILSPIYCAFQNDLLT--SSGFTLE 1096
Query: 566 EIVVFNCSLQQVRNPSSFQEQPHG--NITFNMELYNTDLFLVPSQGVFSVPENGHVYVEV 623
V + E HG N M+L+ D P +SV + V +EV
Sbjct: 1097 WGVY------------TIIEDLHGAGNFVTEMQLFIGDS---PIPQNYSVSASDDVRIEV 1141
Query: 624 SVTKAEQELGFAIQTCFISPYSNPDRMSHYTIIENICPKDESVKFYSPKRVHFPIPQADM 683
+ + + L + C+ +P SN ++ I N CP P I +
Sbjct: 1142 GLYRQKSNLKVVLTECWATPSSNARDPITFSFINNSCP--------VPNTYTNVIENGNS 1193
Query: 684 DKKRFSFVFKPVFNTSLLFLQCELTLC 710
+K +F N S+++L C+L +C
Sbjct: 1194 NKAQFKLRIFSFINDSIVYLHCKLRVC 1220
>gi|145580582 uromodulin-like 1 isoform 2 precursor [Homo sapiens]
Length = 1446
Score = 50.1 bits (118), Expect = 9e-06
Identities = 64/267 (23%), Positives = 104/267 (38%), Gaps = 41/267 (15%)
Query: 451 ALSVKCDNEKMIVAVEKDSFQASGYSGMDVTLLDPTCKAK-MNGTHFVLESPLNGCGTRP 509
A+ V C+ EK++VA++K Q + L P+C NGTH +LE+
Sbjct: 1116 AVRVLCEIEKVVVAIQKRFLQQESIPESSLYLSHPSCNVSHSNGTHVLLEAG-------- 1167
Query: 510 RWSALDGVVYYN--SIVIQVPALGDSS--GWPDGYEDLESGDNGFPGDMDEGDASLFTRP 565
WS ++ N + V++ D S G + L F D+ +S FT
Sbjct: 1168 -WSECGTLMQSNMTNTVVRTTLRNDLSQEGIIHHLKILSPIYCAFQNDLLT--SSGFTLE 1224
Query: 566 EIVVFNCSLQQVRNPSSFQEQPHG--NITFNMELYNTDLFLVPSQGVFSVPENGHVYVEV 623
V + E HG N M+L+ D P +SV + V +EV
Sbjct: 1225 WGVY------------TIIEDLHGAGNFVTEMQLFIGDS---PIPQNYSVSASDDVRIEV 1269
Query: 624 SVTKAEQELGFAIQTCFISPYSNPDRMSHYTIIENICPKDESVKFYSPKRVHFPIPQADM 683
+ + + L + C+ +P SN ++ I N CP P I +
Sbjct: 1270 GLYRQKSNLKVVLTECWATPSSNARDPITFSFINNSCP--------VPNTYTNVIENGNS 1321
Query: 684 DKKRFSFVFKPVFNTSLLFLQCELTLC 710
+K +F N S+++L C+L +C
Sbjct: 1322 NKAQFKLRIFSFINDSIVYLHCKLRVC 1348
>gi|28372569 zona pellucida-like domain containing 1 [Homo sapiens]
Length = 431
Score = 49.3 bits (116), Expect = 2e-05
Identities = 76/294 (25%), Positives = 118/294 (40%), Gaps = 42/294 (14%)
Query: 452 LSVKCDNEKMIVAVEKDSFQASGYSGMDVTLL----DPTCKAKMNGTHF-------VLES 500
+SV C + + + + + SGYS D+ L D C+ +N F + S
Sbjct: 56 ISVYCGVQAITMKINFCTVLFSGYSETDLALNGRHGDSHCRGFINNNTFPAVVIFIINLS 115
Query: 501 PLNGCGTRPRWSALDGV-VYYNSIVIQVPALGDSSGWPDGYEDLESGDNGFPGDMDEGDA 559
L GCG S + GV Y N+ +QV G+ SG+ D D + + PG + +
Sbjct: 116 TLEGCGNNLVVSTIPGVSAYGNATSVQV---GNISGYIDT-PDPPTIISYLPGLLYKFSC 171
Query: 560 SLFTRPEIVVFNCSLQQVRNPSSFQEQPHGNI-TFNMELYNTDLF----LVPSQGVFSVP 614
S E +V N L S +E + T N+ LYN + ++PS G+ P
Sbjct: 172 SYPL--EYLVNNTQLASSSAAISVRENNGTFVSTLNLLLYNDSTYNQQLIIPSIGL---P 226
Query: 615 ENGHVYVEVSVTKAEQELGFAIQTCFISPYSNPDRMSHYTIIENICPKDESVKFYSPKRV 674
V+ V T + + C+ +P NP+ Y + + C KD
Sbjct: 227 LKTKVFAAVQATNLDGRWNVLMDYCYTTPSGNPNDDIRYDLFLS-CDKDPQTTV------ 279
Query: 675 HFPIPQADMDKKRFSF-VFKPVFN----TSLLFLQCELTLCTKMEKHPQKLPKC 723
I + RFSF VF+ V + S +FL C LC + + P +P C
Sbjct: 280 ---IENGRSQRGRFSFEVFRFVKHKNQKMSTVFLHCVTKLC-RADDCPFLMPIC 329
>gi|56550049 uromodulin precursor [Homo sapiens]
Length = 640
Score = 42.4 bits (98), Expect = 0.002
Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 20/155 (12%)
Query: 589 GNITFNMELYNTDLFLVPSQGV-FSVPENGHVYVEVSVTKAE-QELGFAIQTCFISPYSN 646
G T M L+ T + P QG ++ +YV + + + C+ +P SN
Sbjct: 454 GMFTVRMALFQTPSYTQPYQGSSVTLSTEAFLYVGTMLDGGDLSRFALLMTNCYATPSSN 513
Query: 647 PDRMSHYTIIENICP--KDESVKFYSPKRVHFPIPQADMDKKRFSF-VFKPVFNTSLLFL 703
Y II++ CP +D +++ + + + RFS +F+ N L++L
Sbjct: 514 ATDPLKYFIIQDRCPHTRDSTIQV---------VENGESSQGRFSVQMFRFAGNYDLVYL 564
Query: 704 QCELTLCTKMEKHPQKLPKCVPPDEACTSLDASII 738
CE+ LC M + KC P S+I
Sbjct: 565 HCEVYLCDTMNE------KCKPTCSGTRFRSGSVI 593
>gi|59850812 uromodulin precursor [Homo sapiens]
Length = 640
Score = 42.4 bits (98), Expect = 0.002
Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 20/155 (12%)
Query: 589 GNITFNMELYNTDLFLVPSQGV-FSVPENGHVYVEVSVTKAE-QELGFAIQTCFISPYSN 646
G T M L+ T + P QG ++ +YV + + + C+ +P SN
Sbjct: 454 GMFTVRMALFQTPSYTQPYQGSSVTLSTEAFLYVGTMLDGGDLSRFALLMTNCYATPSSN 513
Query: 647 PDRMSHYTIIENICP--KDESVKFYSPKRVHFPIPQADMDKKRFSF-VFKPVFNTSLLFL 703
Y II++ CP +D +++ + + + RFS +F+ N L++L
Sbjct: 514 ATDPLKYFIIQDRCPHTRDSTIQV---------VENGESSQGRFSVQMFRFAGNYDLVYL 564
Query: 704 QCELTLCTKMEKHPQKLPKCVPPDEACTSLDASII 738
CE+ LC M + KC P S+I
Sbjct: 565 HCEVYLCDTMNE------KCKPTCSGTRFRSGSVI 593
>gi|10863987 zona pellucida glycoprotein 4 preproprotein [Homo
sapiens]
Length = 540
Score = 39.3 bits (90), Expect = 0.016
Identities = 62/269 (23%), Positives = 96/269 (35%), Gaps = 60/269 (22%)
Query: 484 DPTCKAKMNGTHFVL-ESPLNGCGTRPRWSALDGVVYYNSIVIQVPALGDSSGWPDGYED 542
D C M FVL + P CGT + + D VY N +V D
Sbjct: 220 DSACNPVMATQAFVLFQFPFTSCGTTRQITG-DRAVYENELVAT--------------RD 264
Query: 543 LESGDNGFPGDMDEGDASLFTRPEI--VVFNCSLQQVRN-----------PSSFQEQPHG 589
+++G G TR I + +CS N P F E G
Sbjct: 265 VKNGSRGS-----------VTRDSIFRLHVSCSYSVSSNSLPINVQVFTLPPPFPETQPG 313
Query: 590 NITFNMELYNTDLFLVPSQGVFSVPE----NGHVYVEVSVT-KAEQELGFAIQTCFISPY 644
+T +++ D GV P +YVEVS+ + + LG +Q C+ +P
Sbjct: 314 PLTLELQIAK-DKNYGSYYGVGDYPVVKLLRDPIYVEVSILHRTDPYLGLLLQQCWATPS 372
Query: 645 SNPDRMSHYTIIENICP------KDESVKFYSPKRVHFPIPQADMDKKRFSFVFKPVFNT 698
++P + I+ CP + + + + FP FSFV V
Sbjct: 373 TDPLSQPQWPILVKGCPYIGDNYQTQLIPVQKALDLPFPSHHQRFSIFTFSFVNPTVEKQ 432
Query: 699 SL---LFLQCELTLCTKMEKHPQKLPKCV 724
+L + L C +++C P + P CV
Sbjct: 433 ALRGPVHLHCSVSVC-----QPAETPSCV 456
>gi|4508045 zona pellucida glycoprotein 2 preproprotein [Homo
sapiens]
Length = 745
Score = 38.1 bits (87), Expect = 0.035
Identities = 48/222 (21%), Positives = 92/222 (41%), Gaps = 27/222 (12%)
Query: 501 PLNGCGTRPRWSALDGVVYYNSIVIQVPALGDSSGWPDGYEDLESGDNGFPGDMDEGDAS 560
PLNGCGTR ++ D VVY N I + W D S D+ F +
Sbjct: 420 PLNGCGTRYKFED-DKVVYENEI---------HALWTDFPPSKISRDSEFRMTVK----C 465
Query: 561 LFTRPEIVVFNCSLQQVRNPSSFQEQPHGNITFNMELYNTDLFLVPSQGVFSVPE----N 616
++R ++++ N +++ + P + + G T ++ Y + + P G P
Sbjct: 466 SYSRNDMLL-NINVESLTPPVASVKL--GPFTLILQSYPDNSYQQP-YGENEYPLVRFLR 521
Query: 617 GHVYVEVSV-TKAEQELGFAIQTCFISPYSNPDRMSHYTIIENICPKD----ESVKFYSP 671
+Y+EV V + + + + C+ + +PD + ++ + C D ++
Sbjct: 522 QPIYMEVRVLNRDDPNIKLVLDDCWATSTMDPDSFPQWNVVVDGCAYDLDNYQTTFHPVG 581
Query: 672 KRVHFPIPQADMDKKRFSFVFKPVFNTSLLFLQCELTLCTKM 713
V P D K F+FV + +SL++ C +C ++
Sbjct: 582 SSVTHPDHYQRFDMKAFAFVSEAHVLSSLVYFHCSALICNRL 623
>gi|27764867 synaptophysin [Homo sapiens]
Length = 313
Score = 35.8 bits (81), Expect = 0.17
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Query: 733 LDASIIWAM-MQNKKTFTKPLAVIHHEAESKEKGPSMKEPNPISPPIFHGLDTLTVMGIA 791
L +S WA + + K T P +I ++ G + KE + P+ GL+T V G
Sbjct: 154 LVSSSAWAKGLSDVKMATDPENIIKEMPVCRQTGNTCKE---LRDPVTSGLNTSVVFG-- 208
Query: 792 FAAFVIGALLTGALWYIYSHTGETAGRQQVPTSPPASE 829
F+ L G LW+++ TG A + P P +
Sbjct: 209 ---FLNLVLWVGNLWFVFKETGWAAPFLRAPPGAPEKQ 243
>gi|119220571 zymogen granule membrane glycoprotein 2 isoform 2
[Homo sapiens]
Length = 534
Score = 34.7 bits (78), Expect = 0.38
Identities = 31/159 (19%), Positives = 59/159 (37%), Gaps = 12/159 (7%)
Query: 568 VVFNCSLQQVRNPSSFQEQPHGNITFNMELYNTDLFLVPSQG-VFSVPENGHVYVEVSVT 626
V +LQ + + + +G M L+ + P +G + +YV +
Sbjct: 325 VSLQAALQPIVSSLNVSVDGNGEFIVRMALFQDQNYTNPYEGDAVELSVESVLYVGAILE 384
Query: 627 KAE-QELGFAIQTCFISPYSNPDRMSHYTIIENICPKDESVKFYSPKRVHFPIPQADMDK 685
+ + ++ C+ +P + + Y II N C + + +
Sbjct: 385 QGDTSRFNLVLRNCYATPTEDKADLVKYFIIRNSCSNQRDSTIHVEEN-------GQSSE 437
Query: 686 KRFSF-VFKPVFNTSLLFLQCELTLCTKMEKHPQKLPKC 723
RFS +F + L+FL CE+ LC + + Q P C
Sbjct: 438 SRFSVQMFMFAGHYDLVFLHCEIHLCDSLNEQCQ--PSC 474
>gi|119220569 zymogen granule membrane glycoprotein 2 isoform 1
[Homo sapiens]
Length = 537
Score = 34.7 bits (78), Expect = 0.38
Identities = 31/159 (19%), Positives = 59/159 (37%), Gaps = 12/159 (7%)
Query: 568 VVFNCSLQQVRNPSSFQEQPHGNITFNMELYNTDLFLVPSQG-VFSVPENGHVYVEVSVT 626
V +LQ + + + +G M L+ + P +G + +YV +
Sbjct: 328 VSLQAALQPIVSSLNVSVDGNGEFIVRMALFQDQNYTNPYEGDAVELSVESVLYVGAILE 387
Query: 627 KAE-QELGFAIQTCFISPYSNPDRMSHYTIIENICPKDESVKFYSPKRVHFPIPQADMDK 685
+ + ++ C+ +P + + Y II N C + + +
Sbjct: 388 QGDTSRFNLVLRNCYATPTEDKADLVKYFIIRNSCSNQRDSTIHVEEN-------GQSSE 440
Query: 686 KRFSF-VFKPVFNTSLLFLQCELTLCTKMEKHPQKLPKC 723
RFS +F + L+FL CE+ LC + + Q P C
Sbjct: 441 SRFSVQMFMFAGHYDLVFLHCEIHLCDSLNEQCQ--PSC 477
>gi|119220573 zymogen granule membrane glycoprotein 2 isoform 4
[Homo sapiens]
Length = 387
Score = 34.7 bits (78), Expect = 0.38
Identities = 31/159 (19%), Positives = 59/159 (37%), Gaps = 12/159 (7%)
Query: 568 VVFNCSLQQVRNPSSFQEQPHGNITFNMELYNTDLFLVPSQG-VFSVPENGHVYVEVSVT 626
V +LQ + + + +G M L+ + P +G + +YV +
Sbjct: 178 VSLQAALQPIVSSLNVSVDGNGEFIVRMALFQDQNYTNPYEGDAVELSVESVLYVGAILE 237
Query: 627 KAE-QELGFAIQTCFISPYSNPDRMSHYTIIENICPKDESVKFYSPKRVHFPIPQADMDK 685
+ + ++ C+ +P + + Y II N C + + +
Sbjct: 238 QGDTSRFNLVLRNCYATPTEDKADLVKYFIIRNSCSNQRDSTIHVEEN-------GQSSE 290
Query: 686 KRFSF-VFKPVFNTSLLFLQCELTLCTKMEKHPQKLPKC 723
RFS +F + L+FL CE+ LC + + Q P C
Sbjct: 291 SRFSVQMFMFAGHYDLVFLHCEIHLCDSLNEQCQ--PSC 327
>gi|119220572 zymogen granule membrane glycoprotein 2 isoform 3
[Homo sapiens]
Length = 390
Score = 34.7 bits (78), Expect = 0.38
Identities = 31/159 (19%), Positives = 59/159 (37%), Gaps = 12/159 (7%)
Query: 568 VVFNCSLQQVRNPSSFQEQPHGNITFNMELYNTDLFLVPSQG-VFSVPENGHVYVEVSVT 626
V +LQ + + + +G M L+ + P +G + +YV +
Sbjct: 181 VSLQAALQPIVSSLNVSVDGNGEFIVRMALFQDQNYTNPYEGDAVELSVESVLYVGAILE 240
Query: 627 KAE-QELGFAIQTCFISPYSNPDRMSHYTIIENICPKDESVKFYSPKRVHFPIPQADMDK 685
+ + ++ C+ +P + + Y II N C + + +
Sbjct: 241 QGDTSRFNLVLRNCYATPTEDKADLVKYFIIRNSCSNQRDSTIHVEEN-------GQSSE 293
Query: 686 KRFSF-VFKPVFNTSLLFLQCELTLCTKMEKHPQKLPKC 723
RFS +F + L+FL CE+ LC + + Q P C
Sbjct: 294 SRFSVQMFMFAGHYDLVFLHCEIHLCDSLNEQCQ--PSC 330
>gi|148536825 alpha 1 type IV collagen preproprotein [Homo sapiens]
Length = 1669
Score = 34.3 bits (77), Expect = 0.50
Identities = 25/68 (36%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Query: 379 DPGALPALQNPPIRGGEGQNGGLPFPFPDISRRVWNEEGEDGLPRPKDPVIPSIQLFPGL 438
+PG + L PP G EG G FP P R G GLP K V FPG
Sbjct: 637 EPGKIVPLPGPP--GAEGLPGSPGFPGPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGP 694
Query: 439 REPEEVQG 446
P+ V G
Sbjct: 695 PGPKGVDG 702
>gi|73486666 alpha 1 type IX collagen isoform 1 precursor [Homo
sapiens]
Length = 921
Score = 33.9 bits (76), Expect = 0.66
Identities = 34/102 (33%), Positives = 44/102 (43%), Gaps = 13/102 (12%)
Query: 355 LENNAEEMGDEEVHTIPPELRILLDPGALPALQNPP-IRGGEGQNGGLPFPFPDISRRVW 413
L + E+G +P +L L PG LP L PP + G +G G + P P +
Sbjct: 623 LPGSRGELGPVGSPGLPGKLGSLGSPG-LPGLPGPPGLPGMKGDRGVVGEPGPKGEQGAS 681
Query: 414 NEEGED---------GLPRPKDPVIPSIQLFPGLREPEEVQG 446
EEGE GLP PK + PGLR PE +G
Sbjct: 682 GEEGEAGERGELGDIGLPGPKGSAGNPGE--PGLRGPEGSRG 721
>gi|73486664 alpha 1 type IX collagen isoform 2 precursor [Homo
sapiens]
Length = 678
Score = 33.9 bits (76), Expect = 0.66
Identities = 34/102 (33%), Positives = 44/102 (43%), Gaps = 13/102 (12%)
Query: 355 LENNAEEMGDEEVHTIPPELRILLDPGALPALQNPP-IRGGEGQNGGLPFPFPDISRRVW 413
L + E+G +P +L L PG LP L PP + G +G G + P P +
Sbjct: 380 LPGSRGELGPVGSPGLPGKLGSLGSPG-LPGLPGPPGLPGMKGDRGVVGEPGPKGEQGAS 438
Query: 414 NEEGED---------GLPRPKDPVIPSIQLFPGLREPEEVQG 446
EEGE GLP PK + PGLR PE +G
Sbjct: 439 GEEGEAGERGELGDIGLPGPKGSAGNPGE--PGLRGPEGSRG 478
>gi|194018518 synaptoporin isoform 1 [Homo sapiens]
Length = 285
Score = 33.5 bits (75), Expect = 0.86
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Query: 733 LDASIIWAM-MQNKKTFTKPLAVIHHEAESKEKGPSMKEPNPISPPIFHGLDTLTVMGIA 791
L S WA + + K T P V+ + K+ PS K I P+ L+T V G
Sbjct: 149 LVGSSAWAKGLSDVKVATDPKEVLLLMSACKQ--PSNK-CMAIHSPVMSSLNTSVVFG-- 203
Query: 792 FAAFVIGALLTGALWYIYSHTGETAGRQQVPTSPPASENSSAAHSIGSTQSTPCSSS 848
F F++ A G +W+++ TG + Q+ S P ++SS+ + G Q + SSS
Sbjct: 204 FLNFILWA---GNIWFVFKETGWHSSGQRY-LSDPMEKHSSSYNQGGYNQDSYGSSS 256
>gi|21389481 synaptoporin isoform 2 [Homo sapiens]
Length = 265
Score = 33.5 bits (75), Expect = 0.86
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Query: 733 LDASIIWAM-MQNKKTFTKPLAVIHHEAESKEKGPSMKEPNPISPPIFHGLDTLTVMGIA 791
L S WA + + K T P V+ + K+ PS K I P+ L+T V G
Sbjct: 129 LVGSSAWAKGLSDVKVATDPKEVLLLMSACKQ--PSNK-CMAIHSPVMSSLNTSVVFG-- 183
Query: 792 FAAFVIGALLTGALWYIYSHTGETAGRQQVPTSPPASENSSAAHSIGSTQSTPCSSS 848
F F++ A G +W+++ TG + Q+ S P ++SS+ + G Q + SSS
Sbjct: 184 FLNFILWA---GNIWFVFKETGWHSSGQRY-LSDPMEKHSSSYNQGGYNQDSYGSSS 236
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,650,927
Number of Sequences: 37866
Number of extensions: 1836590
Number of successful extensions: 4976
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 4898
Number of HSP's gapped (non-prelim): 81
length of query: 851
length of database: 18,247,518
effective HSP length: 111
effective length of query: 740
effective length of database: 14,044,392
effective search space: 10392850080
effective search space used: 10392850080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.