Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 56090139
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|56090139 TRK-fused [Homo sapiens]
(400 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21361320 TRK-fused [Homo sapiens] 814 0.0
gi|56090139 TRK-fused [Homo sapiens] 814 0.0
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 68 2e-11
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 68 2e-11
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 67 3e-11
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 65 8e-11
gi|150170670 piccolo isoform 2 [Homo sapiens] 64 2e-10
gi|150378539 piccolo isoform 1 [Homo sapiens] 64 2e-10
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 64 2e-10
gi|55750053 atrophin-1 [Homo sapiens] 61 2e-09
gi|55750041 atrophin-1 [Homo sapiens] 61 2e-09
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 59 8e-09
gi|19924099 synapsin I isoform Ia [Homo sapiens] 58 2e-08
gi|19924097 synapsin I isoform Ib [Homo sapiens] 58 2e-08
gi|33286444 mastermind-like 2 [Homo sapiens] 57 3e-08
gi|162951884 R3H domain containing 2 [Homo sapiens] 57 3e-08
gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens] 56 5e-08
gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens] 56 5e-08
gi|5454064 RNA binding motif protein 14 [Homo sapiens] 56 7e-08
gi|57165375 glutamate receptor, ionotropic, N-methyl D-aspartate... 55 9e-08
gi|57165373 glutamate receptor, ionotropic, N-methyl D-aspartate... 55 9e-08
gi|148277037 AP2 associated kinase 1 [Homo sapiens] 55 1e-07
gi|124378039 SEC16 homolog A [Homo sapiens] 55 1e-07
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 54 2e-07
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 54 2e-07
gi|188536004 zinc finger protein 469 [Homo sapiens] 54 2e-07
gi|73695473 roquin [Homo sapiens] 54 2e-07
gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens] 53 6e-07
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re... 53 6e-07
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re... 53 6e-07
>gi|21361320 TRK-fused [Homo sapiens]
Length = 400
Score = 814 bits (2103), Expect = 0.0
Identities = 400/400 (100%), Positives = 400/400 (100%)
Query: 1 MNGQLDLSGKLIIKAQLGEDIRRIPIHNEDITYDELVLMMQRVFRGKLLSNDEVTIKYKD 60
MNGQLDLSGKLIIKAQLGEDIRRIPIHNEDITYDELVLMMQRVFRGKLLSNDEVTIKYKD
Sbjct: 1 MNGQLDLSGKLIIKAQLGEDIRRIPIHNEDITYDELVLMMQRVFRGKLLSNDEVTIKYKD 60
Query: 61 EDGDLITIFDSSDLSFAIQCSRILKLTLFVNGQPRPLESSQVKYLRRELIELRNKVNRLL 120
EDGDLITIFDSSDLSFAIQCSRILKLTLFVNGQPRPLESSQVKYLRRELIELRNKVNRLL
Sbjct: 61 EDGDLITIFDSSDLSFAIQCSRILKLTLFVNGQPRPLESSQVKYLRRELIELRNKVNRLL 120
Query: 121 DSLEPPGEPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKN 180
DSLEPPGEPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKN
Sbjct: 121 DSLEPPGEPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKN 180
Query: 181 VMSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIE 240
VMSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIE
Sbjct: 181 VMSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIE 240
Query: 241 GQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAP 300
GQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAP
Sbjct: 241 GQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAP 300
Query: 301 APAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPR 360
APAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPR
Sbjct: 301 APAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPR 360
Query: 361 PGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGPGYR 400
PGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGPGYR
Sbjct: 361 PGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGPGYR 400
>gi|56090139 TRK-fused [Homo sapiens]
Length = 400
Score = 814 bits (2103), Expect = 0.0
Identities = 400/400 (100%), Positives = 400/400 (100%)
Query: 1 MNGQLDLSGKLIIKAQLGEDIRRIPIHNEDITYDELVLMMQRVFRGKLLSNDEVTIKYKD 60
MNGQLDLSGKLIIKAQLGEDIRRIPIHNEDITYDELVLMMQRVFRGKLLSNDEVTIKYKD
Sbjct: 1 MNGQLDLSGKLIIKAQLGEDIRRIPIHNEDITYDELVLMMQRVFRGKLLSNDEVTIKYKD 60
Query: 61 EDGDLITIFDSSDLSFAIQCSRILKLTLFVNGQPRPLESSQVKYLRRELIELRNKVNRLL 120
EDGDLITIFDSSDLSFAIQCSRILKLTLFVNGQPRPLESSQVKYLRRELIELRNKVNRLL
Sbjct: 61 EDGDLITIFDSSDLSFAIQCSRILKLTLFVNGQPRPLESSQVKYLRRELIELRNKVNRLL 120
Query: 121 DSLEPPGEPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKN 180
DSLEPPGEPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKN
Sbjct: 121 DSLEPPGEPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKN 180
Query: 181 VMSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIE 240
VMSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIE
Sbjct: 181 VMSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIE 240
Query: 241 GQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAP 300
GQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAP
Sbjct: 241 GQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAP 300
Query: 301 APAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPR 360
APAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPR
Sbjct: 301 APAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPR 360
Query: 361 PGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGPGYR 400
PGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGPGYR
Sbjct: 361 PGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGPGYR 400
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 67.8 bits (164), Expect = 2e-11
Identities = 79/256 (30%), Positives = 97/256 (37%), Gaps = 53/256 (20%)
Query: 170 PLKNQDEINKNVMSAFGLTD--DQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQ-PQQ 226
P D++ K +G T+ Q GPPS P + G P P G Q PQ+
Sbjct: 380 PSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGH-GYP---------GQPYGSQTPQR 429
Query: 227 PPYTGAQTQAGQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQ 286
P T + G Y Q Q P Q P YG Q Y Q P Q
Sbjct: 430 YPMTMQGRAQSAMGGLSYTQ---------QIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQ 480
Query: 287 QFQGYGQQPTSQAP--APAFSGQPQ--------------QLPAQPPQQYQASNYPAQTYT 330
Q Y QQP SQ P P++ QPQ Q P+QPP Q + YP+Q T
Sbjct: 481 QQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQST 540
Query: 331 AQ---TSQPTNYTVAPASQPGMAPSQPGAYQP-RPGFTSLPGSTMTPPP----SGPNPYA 382
Q SQP P SQP A S QP +P ++L P P S Y+
Sbjct: 541 TQQHPQSQP------PYSQP-QAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYS 593
Query: 383 RNRPPFGQGYTQPGPG 398
+ R P Q +Q G
Sbjct: 594 QQRFPPPQELSQDSFG 609
Score = 48.1 bits (113), Expect = 1e-05
Identities = 59/225 (26%), Positives = 80/225 (35%), Gaps = 38/225 (16%)
Query: 193 SGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQ-QQA 251
S PS P +S P S++ HP QPPY+ Q Q+ YQQ Q QQ
Sbjct: 519 SQQPSQPPHQQSPAPYPSQQSTTQQHPQS----QPPYSQPQAQSP------YQQQQPQQP 568
Query: 252 GYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSG----- 306
QA QPQ Q +A Q+ P Q +G Q +S + G
Sbjct: 569 APSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQEDM 628
Query: 307 ------QPQQLP------AQPPQQYQASNYPAQTYTAQTS---QPTNYTVAPASQPGMAP 351
+P LP P + + P + + +S + +N +P S P +P
Sbjct: 629 NLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFS-PHTSP 687
Query: 352 SQPGAYQPRPGFTSLPGSTM------TPPPSGPNPYARNRPPFGQ 390
PG P P P S P + P RPP GQ
Sbjct: 688 HLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQ 732
Score = 47.0 bits (110), Expect = 3e-05
Identities = 57/222 (25%), Positives = 80/222 (36%), Gaps = 39/222 (17%)
Query: 195 PPSAPA----EDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQ 250
PP APA R GTP S A++++ + PP + + + A Q G M
Sbjct: 223 PPPAPAYALSSPRGGTPGSGAAAAAGSKPPPSSSASAS-SSSSSFAQQRFGAMGGGGPSA 281
Query: 251 AGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQ-PQ 309
AG G QP A P Q T P + +QGY S P +G+ P
Sbjct: 282 AGGGTPQPTATPTLNQLL-----------TSPSSARGYQGYPGGDYSGGPQDGGAGKGPA 330
Query: 310 QLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPAS------------QPGMAPSQPGAY 357
+ +Q A+ A + + ++P S QP Q G
Sbjct: 331 DMASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGGQPLARTPQPSSPMDQMGKM 390
Query: 358 QPRPGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGPGY 399
+P+P + P S PPSGP QG+ PG Y
Sbjct: 391 RPQPYGGTNPYSQQQGPPSGPQ----------QGHGYPGQPY 422
Score = 42.7 bits (99), Expect = 6e-04
Identities = 58/213 (27%), Positives = 76/213 (35%), Gaps = 38/213 (17%)
Query: 192 VSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQP--QQPPYTGAQTQAGQIEGQMYQQYQQ 249
+ GP +P G+P S+A S S P P Q PP + +GQ + M+ Q
Sbjct: 692 IRGPSPSPV----GSPASVAQSRSGPLSPAAVPGNQMPP----RPPSGQSDSIMHPSMNQ 743
Query: 250 QA-----GYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPT-SQAPAPA 303
+ GY + PQ P Q G S Q +G Q Y Q S P
Sbjct: 744 SSIAQDRGYMQRNPQMPQYSSPQPGSALSPR--QPSGGQIHTGMGSYQQNSMGSYGPQGG 801
Query: 304 FSGQPQQLPAQPPQQYQA---SNYPAQTYTAQTSQPTNYTVAPASQPGMAP--------- 351
G P QP Y A +NYP+ + P QPG+ P
Sbjct: 802 QYGPQGGYPRQP--NYNALPNANYPSAGMAGGIN-PMGAGGQMHGQPGIPPYGTLPPGRM 858
Query: 352 --SQPGAYQPRPGFTSLP---GSTMTPPPSGPN 379
+ G P ++P GS M PPP G N
Sbjct: 859 SHASMGNRPYGPNMANMPPQVGSGMCPPPGGMN 891
Score = 40.4 bits (93), Expect = 0.003
Identities = 65/237 (27%), Positives = 78/237 (32%), Gaps = 65/237 (27%)
Query: 205 GTPDS--IASSSSAAHPPGVQPQQPPYTGAQ-TQAGQIEGQMYQQYQQQAGYGAQQPQAP 261
GTP S + + Q + P G A + EG+MY QQ Q P
Sbjct: 1347 GTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGPPAKRHEGEMYSVPYSTGQGQPQQQQLP 1406
Query: 262 PQQPQ------------------QYGIQYSASYSQQT------GPQQPQQFQGYGQQPTS 297
P QPQ QYG Y A+ + T GPQ FQ +G+ S
Sbjct: 1407 PAQPQPASQQQAAQPSPQQDVYNQYGNAYPATATAATERRPAGGPQNQFPFQ-FGRDRVS 1465
Query: 298 QAPA--------PAFSGQPQQLPAQPPQQ---YQASNYPAQTYTAQTSQPTN-------- 338
P P G P Q A+ QQ +Q N TY Q T
Sbjct: 1466 APPGTNAQQNMPPQMMGGPIQASAEVAQQGTMWQGRN--DMTYNYANRQSTGSAPQGPAY 1523
Query: 339 ----------YTVAPASQPGMAPS----QP--GAYQPRPGFTSLPGSTMTPPPSGPN 379
+T A+ G PS QP G P P T P S PPPS N
Sbjct: 1524 HGVNRTDEMLHTDQRANHEGSWPSHGTRQPPYGPSAPVPPMTRPPPSNYQPPPSMQN 1580
Score = 39.3 bits (90), Expect = 0.006
Identities = 47/189 (24%), Positives = 60/189 (31%), Gaps = 23/189 (12%)
Query: 220 PGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQ 279
PG+ P+ TGA Q + + Y QQ Q Q+ YG Q+S +
Sbjct: 1292 PGIGPEGNMSTGAP-QPNLMPSNPDSGMYSPSRYPPQQQQQQQQRHDSYGNQFSTQGTPS 1350
Query: 280 TGPQQPQQFQGYGQQPTS---------------------QAPAPAFSGQPQQLPAQPPQQ 318
P QQ Y QQ + P GQPQQ P Q
Sbjct: 1351 GSPFPSQQTTMYQQQQQNYKRPMDGTYGPPAKRHEGEMYSVPYSTGQGQPQQQQLPPAQP 1410
Query: 319 YQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGSTMTPPPSGP 378
AS A + Q Y A + A + A P+ F G P G
Sbjct: 1411 QPASQQQAAQPSPQQDVYNQYGNAYPATATAATERRPAGGPQNQFPFQFGRDRVSAPPGT 1470
Query: 379 NPYARNRPP 387
N +N PP
Sbjct: 1471 NA-QQNMPP 1478
Score = 32.3 bits (72), Expect = 0.78
Identities = 34/118 (28%), Positives = 42/118 (35%), Gaps = 18/118 (15%)
Query: 294 QPTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPS- 352
QP Q P+PA SG Q Q PQ +S T T ++ P PGM+ S
Sbjct: 1127 QPKIQPPSPAGSGSMQ--GPQTPQSTSSSMAEGGDLKPPTPASTPHSQIP-PLPGMSRSN 1183
Query: 353 -----------QPGAYQPRPGFTSLPG---STMTPPPSGPNPYARNRPPFGQGYTQPG 396
+Q R T PG S T G Y N+ P+G PG
Sbjct: 1184 SVGIQDAFNDGSDSTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPG 1241
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 67.8 bits (164), Expect = 2e-11
Identities = 79/256 (30%), Positives = 97/256 (37%), Gaps = 53/256 (20%)
Query: 170 PLKNQDEINKNVMSAFGLTD--DQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQ-PQQ 226
P D++ K +G T+ Q GPPS P + G P P G Q PQ+
Sbjct: 380 PSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGH-GYP---------GQPYGSQTPQR 429
Query: 227 PPYTGAQTQAGQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQ 286
P T + G Y Q Q P Q P YG Q Y Q P Q
Sbjct: 430 YPMTMQGRAQSAMGGLSYTQ---------QIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQ 480
Query: 287 QFQGYGQQPTSQAP--APAFSGQPQ--------------QLPAQPPQQYQASNYPAQTYT 330
Q Y QQP SQ P P++ QPQ Q P+QPP Q + YP+Q T
Sbjct: 481 QQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQST 540
Query: 331 AQ---TSQPTNYTVAPASQPGMAPSQPGAYQP-RPGFTSLPGSTMTPPP----SGPNPYA 382
Q SQP P SQP A S QP +P ++L P P S Y+
Sbjct: 541 TQQHPQSQP------PYSQP-QAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYS 593
Query: 383 RNRPPFGQGYTQPGPG 398
+ R P Q +Q G
Sbjct: 594 QQRFPPPQELSQDSFG 609
Score = 48.1 bits (113), Expect = 1e-05
Identities = 59/225 (26%), Positives = 80/225 (35%), Gaps = 38/225 (16%)
Query: 193 SGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQ-QQA 251
S PS P +S P S++ HP QPPY+ Q Q+ YQQ Q QQ
Sbjct: 519 SQQPSQPPHQQSPAPYPSQQSTTQQHPQS----QPPYSQPQAQSP------YQQQQPQQP 568
Query: 252 GYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSG----- 306
QA QPQ Q +A Q+ P Q +G Q +S + G
Sbjct: 569 APSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQEDM 628
Query: 307 ------QPQQLP------AQPPQQYQASNYPAQTYTAQTS---QPTNYTVAPASQPGMAP 351
+P LP P + + P + + +S + +N +P S P +P
Sbjct: 629 NLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFS-PHTSP 687
Query: 352 SQPGAYQPRPGFTSLPGSTM------TPPPSGPNPYARNRPPFGQ 390
PG P P P S P + P RPP GQ
Sbjct: 688 HLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQ 732
Score = 47.0 bits (110), Expect = 3e-05
Identities = 57/222 (25%), Positives = 80/222 (36%), Gaps = 39/222 (17%)
Query: 195 PPSAPA----EDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQ 250
PP APA R GTP S A++++ + PP + + + A Q G M
Sbjct: 223 PPPAPAYALSSPRGGTPGSGAAAAAGSKPPPSSSASAS-SSSSSFAQQRFGAMGGGGPSA 281
Query: 251 AGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQ-PQ 309
AG G QP A P Q T P + +QGY S P +G+ P
Sbjct: 282 AGGGTPQPTATPTLNQLL-----------TSPSSARGYQGYPGGDYSGGPQDGGAGKGPA 330
Query: 310 QLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPAS------------QPGMAPSQPGAY 357
+ +Q A+ A + + ++P S QP Q G
Sbjct: 331 DMASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGGQPLARTPQPSSPMDQMGKM 390
Query: 358 QPRPGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGPGY 399
+P+P + P S PPSGP QG+ PG Y
Sbjct: 391 RPQPYGGTNPYSQQQGPPSGPQ----------QGHGYPGQPY 422
Score = 42.7 bits (99), Expect = 6e-04
Identities = 58/213 (27%), Positives = 76/213 (35%), Gaps = 38/213 (17%)
Query: 192 VSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQP--QQPPYTGAQTQAGQIEGQMYQQYQQ 249
+ GP +P G+P S+A S S P P Q PP + +GQ + M+ Q
Sbjct: 692 IRGPSPSPV----GSPASVAQSRSGPLSPAAVPGNQMPP----RPPSGQSDSIMHPSMNQ 743
Query: 250 QA-----GYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPT-SQAPAPA 303
+ GY + PQ P Q G S Q +G Q Y Q S P
Sbjct: 744 SSIAQDRGYMQRNPQMPQYSSPQPGSALSPR--QPSGGQIHTGMGSYQQNSMGSYGPQGG 801
Query: 304 FSGQPQQLPAQPPQQYQA---SNYPAQTYTAQTSQPTNYTVAPASQPGMAP--------- 351
G P QP Y A +NYP+ + P QPG+ P
Sbjct: 802 QYGPQGGYPRQP--NYNALPNANYPSAGMAGGIN-PMGAGGQMHGQPGIPPYGTLPPGRM 858
Query: 352 --SQPGAYQPRPGFTSLP---GSTMTPPPSGPN 379
+ G P ++P GS M PPP G N
Sbjct: 859 SHASMGNRPYGPNMANMPPQVGSGMCPPPGGMN 891
Score = 38.5 bits (88), Expect = 0.011
Identities = 44/156 (28%), Positives = 55/156 (35%), Gaps = 13/156 (8%)
Query: 220 PGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQ 279
PG+ P+ TGA Q + + Y QQ Q Q+ YG Q+S +
Sbjct: 1292 PGIGPEGNMSTGAP-QPNLMPSNPDSGMYSPSRYPPQQQQQQQQRHDSYGNQFSTQGTPS 1350
Query: 280 TGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNY 339
P QQ Y QQ +PAP LP + S P ++ Q
Sbjct: 1351 GSPFPSQQTTMYQQQQQVSSPAP--------LPRPMENRTSPSKSPF-LHSGMKMQKAGP 1401
Query: 340 TVAPASQPGMAPSQPGAYQPRPGFTSLPGSTMTPPP 375
V PAS AP QP R T PGS P
Sbjct: 1402 PV-PASHIAPAPVQPPMI--RRDITFPPGSVEATQP 1434
Score = 32.3 bits (72), Expect = 0.78
Identities = 34/118 (28%), Positives = 42/118 (35%), Gaps = 18/118 (15%)
Query: 294 QPTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPS- 352
QP Q P+PA SG Q Q PQ +S T T ++ P PGM+ S
Sbjct: 1127 QPKIQPPSPAGSGSMQ--GPQTPQSTSSSMAEGGDLKPPTPASTPHSQIP-PLPGMSRSN 1183
Query: 353 -----------QPGAYQPRPGFTSLPG---STMTPPPSGPNPYARNRPPFGQGYTQPG 396
+Q R T PG S T G Y N+ P+G PG
Sbjct: 1184 SVGIQDAFNDGSDSTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPG 1241
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 67.0 bits (162), Expect = 3e-11
Identities = 55/205 (26%), Positives = 73/205 (35%), Gaps = 4/205 (1%)
Query: 194 GPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGY 253
GPPS P + + P PPG PP G + Q G+ Q G
Sbjct: 49 GPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGK--PQGPPPQGD 106
Query: 254 GAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPA 313
++ P++PP +PQ G Q P P + QG Q ++ P G+PQ P
Sbjct: 107 KSRSPRSPPGKPQ--GPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPP 164
Query: 314 QPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGSTMTP 373
Q + ++S P Q N P PG P +P PG P
Sbjct: 165 QGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP 224
Query: 374 PPSGPNPYARNRPPFGQGYTQPGPG 398
PP G N R P G+ P G
Sbjct: 225 PPQGDNKSQSARSPPGKPQGPPPQG 249
Score = 64.7 bits (156), Expect = 1e-10
Identities = 64/208 (30%), Positives = 72/208 (34%), Gaps = 20/208 (9%)
Query: 194 GPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGY 253
GPP P + + P S SA PPG PP G Q Q Q Q G
Sbjct: 214 GPPP-PGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGN 272
Query: 254 GAQQPQAP--PQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQL 311
Q P P PQ P G S S G Q QG G QP P P G+PQ
Sbjct: 273 KPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQG-GNQPQGPPPPP---GKPQGP 328
Query: 312 PAQPPQQYQASNYPA--QTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGS 369
P Q + Q P Q Q + +P +P P Q G P
Sbjct: 329 PPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGP-------- 380
Query: 370 TMTPPPSGPNPYARNRPPFGQGYTQPGP 397
PPP+G NP PP GQ P P
Sbjct: 381 ---PPPAGGNPQQPQAPPAGQPQGPPRP 405
Score = 61.2 bits (147), Expect = 2e-09
Identities = 52/206 (25%), Positives = 71/206 (34%), Gaps = 2/206 (0%)
Query: 193 SGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAG 252
S P +P G P + PP +PQ PP G G Q Q
Sbjct: 108 SRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGD 167
Query: 253 YGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLP 312
++ ++PP +PQ G Q P P + QG Q ++ P G+PQ P
Sbjct: 168 NKSRSSRSPPGKPQ--GPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPP 225
Query: 313 AQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGSTMT 372
Q + Q++ P Q N P PG P +P PG
Sbjct: 226 PQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG 285
Query: 373 PPPSGPNPYARNRPPFGQGYTQPGPG 398
PPP G + +R P G+ P G
Sbjct: 286 PPPQGGSKSRSSRSPPGKPQGPPPQG 311
Score = 58.2 bits (139), Expect = 1e-08
Identities = 52/201 (25%), Positives = 68/201 (33%), Gaps = 6/201 (2%)
Query: 195 PPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGYG 254
PP P G P + PP +PQ PP G G Q Q
Sbjct: 176 PPGKP----QGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNK 231
Query: 255 AQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQ 314
+Q ++PP +PQ G Q P P + QG Q ++ P G+PQ P Q
Sbjct: 232 SQSARSPPGKPQ--GPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ 289
Query: 315 PPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGSTMTPP 374
+ ++S P Q N P PG P +P PG PP
Sbjct: 290 GGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPP 349
Query: 375 PSGPNPYARNRPPFGQGYTQP 395
P G + R P G+ P
Sbjct: 350 PQGGSKSRSARSPPGKPQGPP 370
Score = 55.5 bits (132), Expect = 9e-08
Identities = 61/207 (29%), Positives = 76/207 (36%), Gaps = 11/207 (5%)
Query: 196 PSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGYGA 255
PS A + G P + P +PQ PP G G Q G
Sbjct: 29 PSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNK 88
Query: 256 QQPQAPPQQPQQYGIQYSASYSQQTGPQQPQ--QFQGYGQQPTSQAPAPAFSGQPQQLPA 313
Q PP +PQ Q S S ++ P +PQ QG G QP P P G+PQ P
Sbjct: 89 PQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQG-GNQPQGPPPPP---GKPQGPPP 144
Query: 314 QPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPG--MAPSQPGAYQPRPGFTSLPGSTM 371
Q + Q P + Q N + + S PG P G QP+ G PG
Sbjct: 145 QGGNKPQGPPPPGKP-QGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQ-GPPPPPGKPQ 202
Query: 372 TPPPSGPNPYARNRPPFGQGYTQPGPG 398
PPP G N + PP G+ P G
Sbjct: 203 GPPPQGGNK-PQGPPPPGKPQGPPPQG 228
Score = 35.0 bits (79), Expect = 0.12
Identities = 25/95 (26%), Positives = 32/95 (33%), Gaps = 1/95 (1%)
Query: 294 QPTSQAPAPAF-SGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPS 352
+ SQ +P+ +G PQ P Q + Q P Q N P PG
Sbjct: 21 EDVSQEESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQG 80
Query: 353 QPGAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPP 387
P +P PG PPP G + PP
Sbjct: 81 PPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPP 115
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 65.5 bits (158), Expect = 8e-11
Identities = 67/208 (32%), Positives = 76/208 (36%), Gaps = 22/208 (10%)
Query: 194 GPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGY 253
GPP P G P S S PPG PP G Q Q Q Q G
Sbjct: 131 GPP--PPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGK 188
Query: 254 GAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQ--QFQGYGQQPTSQAPAPAFSGQPQQL 311
Q P PP +PQ Q S S Q+ P +PQ QG G QP P P G+PQ
Sbjct: 189 KPQGPP-PPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQG-GNQPQGPPPPP---GKPQGP 243
Query: 312 PAQPPQQYQASNYPA--QTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGS 369
P Q + Q P Q AQ + +P +P P Q G P
Sbjct: 244 PPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGP-------- 295
Query: 370 TMTPPPSGPNPYARNRPPFGQGYTQPGP 397
PPP+G NP PP GQ P P
Sbjct: 296 ---PPPAGGNPQQPQAPPAGQPQGPPRP 320
Score = 56.2 bits (134), Expect = 5e-08
Identities = 69/234 (29%), Positives = 92/234 (39%), Gaps = 44/234 (18%)
Query: 194 GPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGY 253
GPP P + + G P + PPG +PQ PP G ++++ + Q Q G
Sbjct: 49 GPPPPPGKPQ-GPPPQGGNKPQGPPPPG-KPQGPPPQGDKSRSPRSPPGKPQGPPPQGGN 106
Query: 254 GAQQPQAPPQQPQ----QYG----------------IQYSASYSQQTGPQQPQ--QFQGY 291
Q P PP +PQ Q G Q S S ++ P +PQ QG
Sbjct: 107 QPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQG- 165
Query: 292 GQQPTSQAPAPAFSGQPQQLPAQ-------PPQQYQASNYPAQTYTAQTSQPTNYTVAPA 344
G QP P P G+PQ P Q PP + P Q +++SQ +P
Sbjct: 166 GNQPQGPPPPP---GKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQ------SPP 216
Query: 345 SQPGMAPSQPGAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGPG 398
+P P Q G QP+ G PG PPP G N + PP G+ P G
Sbjct: 217 GKPQGPPPQ-GGNQPQ-GPPPPPGKPQGPPPQGGNK-PQGPPPPGKPQGPPAQG 267
Score = 52.4 bits (124), Expect = 7e-07
Identities = 49/196 (25%), Positives = 67/196 (34%), Gaps = 11/196 (5%)
Query: 192 VSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQA 251
++G P P+ P PP +PQ PP G G Q Q
Sbjct: 32 IAGNPQGPSPQGGNKPQG-------PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ- 83
Query: 252 GYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQL 311
G ++ P++PP +PQ G Q P P + QG Q ++ P G+PQ
Sbjct: 84 GDKSRSPRSPPGKPQ--GPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGP 141
Query: 312 PAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGSTM 371
P Q + + P + Q N P PG P +P PG
Sbjct: 142 PPQGDKSRSPRSPPGKP-QGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQ 200
Query: 372 TPPPSGPNPYARNRPP 387
PPP G + PP
Sbjct: 201 GPPPQGDKSRSSQSPP 216
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 64.3 bits (155), Expect = 2e-10
Identities = 71/217 (32%), Positives = 86/217 (39%), Gaps = 26/217 (11%)
Query: 191 QVSGPPSAPAEDR-SGTPDSIASSSSA-AHPPGV---QPQQPPYTGAQTQAGQIEGQMYQ 245
Q GP PA+ S P S A A PPGV QQP TQ + Q
Sbjct: 364 QPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQ 423
Query: 246 QYQQQAGYGAQQP-QAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAF 304
Q Q+ A P + P QQP I +QQ GP + Q +P SQ P PA
Sbjct: 424 QPGLQSPAKAPGPTKTPVQQPGPGKIP-----AQQAGPGKTSAQQTGPTKPPSQLPGPAK 478
Query: 305 SGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMA---PSQPGAYQP-- 359
Q PA+PP Q S P SQ T P QPG A P QPG+ +P
Sbjct: 479 PPPQQPGPAKPPPQQPGSAKP-------PSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPS 531
Query: 360 -RPGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQP 395
+PG S S P P+ P+ +P G +P
Sbjct: 532 QQPG--SAKPSAQQPSPAKPSAQQSTKPVSQTGSGKP 566
Score = 53.9 bits (128), Expect = 2e-07
Identities = 72/292 (24%), Positives = 110/292 (37%), Gaps = 31/292 (10%)
Query: 124 EPPGEPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKNVMS 183
+ P +P P P D + +++ + S +Q ++ + P++ + + +
Sbjct: 213 QQPPKPIPKQQGPGRDPL--QQDGTPKSISSQQPEKIKSQPPGTGKPIQGPTQTPQTDHA 270
Query: 184 AFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQM 243
L D S P + A+ G +S+ S + P +Q P AQ Q G + Q
Sbjct: 271 KLPLQRD-ASRPQTKQADIVRG--ESVKPSLPSPSKPPIQQPTPGKPPAQ-QPGHEKSQP 326
Query: 244 YQQYQQQAGYGAQQPQA-------PPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPT 296
G +P A PP QP + +Q GP +P Q ++P+
Sbjct: 327 GPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGT----TKPPAQPLGPAKPPAQQTGSEKPS 382
Query: 297 SQAPAPAFSGQP---------QQLPAQPPQQYQASNYP--AQTYTAQTSQPTNYTVAPAS 345
S+ P P QP Q PA+PP Q + P Q ++ T P
Sbjct: 383 SEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQ 442
Query: 346 QPGMAPSQPGAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGP 397
QPG P + A Q PG TS + T PPS P PP G +P P
Sbjct: 443 QPG--PGKIPAQQAGPGKTSAQQTGPTKPPS-QLPGPAKPPPQQPGPAKPPP 491
Score = 44.7 bits (104), Expect = 2e-04
Identities = 78/338 (23%), Positives = 110/338 (32%), Gaps = 93/338 (27%)
Query: 122 SLEPPGEPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKNV 181
+++PP +P P T P + + + S K S++ A P
Sbjct: 348 TVKPPVQP-PGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPP----------- 395
Query: 182 MSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHP-----PGVQPQQPPYTGA---- 232
G T Q GP P + + GTP +A P P P Q P G
Sbjct: 396 --GVGKTPAQQPGPAKPPTQ-QVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQ 452
Query: 233 QTQAGQIEGQMY------QQYQQQAGYGAQQP---QAPPQQP-------QQYGIQYSASY 276
Q G+ Q Q A QQP + PPQQP QQ G +
Sbjct: 453 QAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGS--TKPP 510
Query: 277 SQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQP 336
QQ GP +P Q +P SQ P A Q PA+P Q Q++ +QT + + QP
Sbjct: 511 PQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQ-QSTKPVSQTGSGKPLQP 569
Query: 337 TNYTVAPASQPGMAPSQPGA-----------------------------------YQPRP 361
TV+P+++ + P + P P
Sbjct: 570 P--TVSPSAKQPPSQGLPKTICPLCNTTELLLHVPEKANFNTCTECQTTVCSLCGFNPNP 627
Query: 362 GFTSLP-------------GSTMTPPPSGPNPYARNRP 386
T + G + P PS P P + P
Sbjct: 628 HLTEVKEWLCLNCQMKRALGGDLAPVPSSPQPKLKTAP 665
Score = 41.2 bits (95), Expect = 0.002
Identities = 40/125 (32%), Positives = 46/125 (36%), Gaps = 12/125 (9%)
Query: 200 AEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQI-------EGQMYQQYQQQAG 252
AEDR DS SS+ + P T QT+ Q E Q+
Sbjct: 3828 AEDRDYMSDSEVSSTRPTRIESQHGIERPRTAPQTEFSQFIPPQTQTESQLVPPTSPYTQ 3887
Query: 253 YGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLP 312
Y P P Q P Y Q + + QQT QQ Y QPT QA A S PQ P
Sbjct: 3888 YQYSSPALPTQAPTSYTQQ--SHFEQQT--LYHQQVSPYQTQPTFQAVA-TMSFTPQVQP 3942
Query: 313 AQPPQ 317
PQ
Sbjct: 3943 TPTPQ 3947
Score = 40.8 bits (94), Expect = 0.002
Identities = 65/291 (22%), Positives = 100/291 (34%), Gaps = 41/291 (14%)
Query: 121 DSLEPPGEPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKN 180
DSL P P + E D ++K K +T ++++S + P D +
Sbjct: 727 DSLSKPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKP----DIPSSK 782
Query: 181 VMS-AFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHP-PGVQPQQPPYTGAQTQA-G 237
V S A T + + P++ T + ++ S A P P + + G +++ G
Sbjct: 783 VQSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSKAIPRPASDSKIISHPGPSSESKG 842
Query: 238 QIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTS 297
Q + Q+ ++ + P +P G P P G +PT+
Sbjct: 843 QKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKG-----------SPTPP------GPRPTA 885
Query: 298 QAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTN-----------YTVAPASQ 346
P PQQ P Q + S A SQPT + + SQ
Sbjct: 886 GQTVPT----PQQSPKPQEQSRRFSLNLGSITDAPKSQPTTPQETVTGKLFGFGASIFSQ 941
Query: 347 PGMAPSQPGAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGP 397
S G QP P S PG+ M P+ P PP G P P
Sbjct: 942 ASNLISTAG--QPGPHSQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAP 990
Score = 37.0 bits (84), Expect = 0.032
Identities = 39/125 (31%), Positives = 51/125 (40%), Gaps = 13/125 (10%)
Query: 278 QQTGPQQPQQFQGYGQQPTSQ--APAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQ 335
QQ P+ + QG G+ P Q P S QP+++ +QPP + P Q T QT
Sbjct: 212 QQQPPKPIPKQQGPGRDPLQQDGTPKSISSQQPEKIKSQPPGTGKPIQGPTQ--TPQTDH 269
Query: 336 PTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPPF---GQGY 392
AS+P Q + SLP S PP P P +PP G
Sbjct: 270 AKLPLQRDASRP--QTKQADIVRGESVKPSLP-SPSKPPIQQPTP---GKPPAQQPGHEK 323
Query: 393 TQPGP 397
+QPGP
Sbjct: 324 SQPGP 328
Score = 31.2 bits (69), Expect = 1.7
Identities = 45/213 (21%), Positives = 74/213 (34%), Gaps = 28/213 (13%)
Query: 196 PSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGYGA 255
P S PD+ + PPG +P Q+ + + Q +++ G
Sbjct: 855 PKKAQTKMSPKPDAKPMPKGSPTPPGPRPTAGQTVPTPQQSPKPQEQS-RRFSLNLGSIT 913
Query: 256 QQPQAPPQQPQQ--------YGIQYSASYSQ------------QTGPQQP-QQFQGYGQQ 294
P++ P PQ+ +G + S Q+GP P +Q Q
Sbjct: 914 DAPKSQPTTPQETVTGKLFGFGASIFSQASNLISTAGQPGPHSQSGPGAPMKQAPAPSQP 973
Query: 295 PTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQP 354
PTSQ P P +GQ PA+ + + PA A+ +P AP + +P
Sbjct: 974 PTSQGP-PKSTGQAPPAPAKSIPVKKETKAPA----AEKLEP-KAEQAPTVKRTETEKKP 1027
Query: 355 GAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPP 387
+ T+ P + P +P + P
Sbjct: 1028 PPIKDSKSLTAEPQKAVLPTKLEKSPKPESTCP 1060
Score = 28.9 bits (63), Expect = 8.6
Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 7/97 (7%)
Query: 293 QQPTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPS 352
++ S F P + A P ++ ++ Y T +P + P+ P ++ S
Sbjct: 2329 ERTKSSLSETVFDHPPSSVIALPMKEQLSTTYFTSGETFGQEKPASQL--PSGSPSVS-S 2385
Query: 353 QPGAYQPRPGF--TSLPGSTMTPPPSGPNPYARNRPP 387
P +PRP F +SL S PPP P P PP
Sbjct: 2386 LPA--KPRPFFRSSSLDISAQPPPPPPPPPPPPPPPP 2420
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 64.3 bits (155), Expect = 2e-10
Identities = 71/217 (32%), Positives = 86/217 (39%), Gaps = 26/217 (11%)
Query: 191 QVSGPPSAPAEDR-SGTPDSIASSSSA-AHPPGV---QPQQPPYTGAQTQAGQIEGQMYQ 245
Q GP PA+ S P S A A PPGV QQP TQ + Q
Sbjct: 364 QPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQ 423
Query: 246 QYQQQAGYGAQQP-QAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAF 304
Q Q+ A P + P QQP I +QQ GP + Q +P SQ P PA
Sbjct: 424 QPGLQSPAKAPGPTKTPVQQPGPGKIP-----AQQAGPGKTSAQQTGPTKPPSQLPGPAK 478
Query: 305 SGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMA---PSQPGAYQP-- 359
Q PA+PP Q S P SQ T P QPG A P QPG+ +P
Sbjct: 479 PPPQQPGPAKPPPQQPGSAKP-------PSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPS 531
Query: 360 -RPGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQP 395
+PG S S P P+ P+ +P G +P
Sbjct: 532 QQPG--SAKPSAQQPSPAKPSAQQSTKPVSQTGSGKP 566
Score = 53.9 bits (128), Expect = 2e-07
Identities = 72/292 (24%), Positives = 110/292 (37%), Gaps = 31/292 (10%)
Query: 124 EPPGEPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKNVMS 183
+ P +P P P D + +++ + S +Q ++ + P++ + + +
Sbjct: 213 QQPPKPIPKQQGPGRDPL--QQDGTPKSISSQQPEKIKSQPPGTGKPIQGPTQTPQTDHA 270
Query: 184 AFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQM 243
L D S P + A+ G +S+ S + P +Q P AQ Q G + Q
Sbjct: 271 KLPLQRD-ASRPQTKQADIVRG--ESVKPSLPSPSKPPIQQPTPGKPPAQ-QPGHEKSQP 326
Query: 244 YQQYQQQAGYGAQQPQA-------PPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPT 296
G +P A PP QP + +Q GP +P Q ++P+
Sbjct: 327 GPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGT----TKPPAQPLGPAKPPAQQTGSEKPS 382
Query: 297 SQAPAPAFSGQP---------QQLPAQPPQQYQASNYP--AQTYTAQTSQPTNYTVAPAS 345
S+ P P QP Q PA+PP Q + P Q ++ T P
Sbjct: 383 SEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQ 442
Query: 346 QPGMAPSQPGAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGP 397
QPG P + A Q PG TS + T PPS P PP G +P P
Sbjct: 443 QPG--PGKIPAQQAGPGKTSAQQTGPTKPPS-QLPGPAKPPPQQPGPAKPPP 491
Score = 44.7 bits (104), Expect = 2e-04
Identities = 78/338 (23%), Positives = 110/338 (32%), Gaps = 93/338 (27%)
Query: 122 SLEPPGEPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKNV 181
+++PP +P P T P + + + S K S++ A P
Sbjct: 348 TVKPPVQP-PGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPP----------- 395
Query: 182 MSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHP-----PGVQPQQPPYTGA---- 232
G T Q GP P + + GTP +A P P P Q P G
Sbjct: 396 --GVGKTPAQQPGPAKPPTQ-QVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQ 452
Query: 233 QTQAGQIEGQMY------QQYQQQAGYGAQQP---QAPPQQP-------QQYGIQYSASY 276
Q G+ Q Q A QQP + PPQQP QQ G +
Sbjct: 453 QAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGS--TKPP 510
Query: 277 SQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQP 336
QQ GP +P Q +P SQ P A Q PA+P Q Q++ +QT + + QP
Sbjct: 511 PQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQ-QSTKPVSQTGSGKPLQP 569
Query: 337 TNYTVAPASQPGMAPSQPGA-----------------------------------YQPRP 361
TV+P+++ + P + P P
Sbjct: 570 P--TVSPSAKQPPSQGLPKTICPLCNTTELLLHVPEKANFNTCTECQTTVCSLCGFNPNP 627
Query: 362 GFTSLP-------------GSTMTPPPSGPNPYARNRP 386
T + G + P PS P P + P
Sbjct: 628 HLTEVKEWLCLNCQMKRALGGDLAPVPSSPQPKLKTAP 665
Score = 41.2 bits (95), Expect = 0.002
Identities = 40/125 (32%), Positives = 46/125 (36%), Gaps = 12/125 (9%)
Query: 200 AEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQI-------EGQMYQQYQQQAG 252
AEDR DS SS+ + P T QT+ Q E Q+
Sbjct: 3828 AEDRDYMSDSEVSSTRPTRIESQHGIERPRTAPQTEFSQFIPPQTQTESQLVPPTSPYTQ 3887
Query: 253 YGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLP 312
Y P P Q P Y Q + + QQT QQ Y QPT QA A S PQ P
Sbjct: 3888 YQYSSPALPTQAPTSYTQQ--SHFEQQT--LYHQQVSPYQTQPTFQAVA-TMSFTPQVQP 3942
Query: 313 AQPPQ 317
PQ
Sbjct: 3943 TPTPQ 3947
Score = 40.8 bits (94), Expect = 0.002
Identities = 65/291 (22%), Positives = 100/291 (34%), Gaps = 41/291 (14%)
Query: 121 DSLEPPGEPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKN 180
DSL P P + E D ++K K +T ++++S + P D +
Sbjct: 727 DSLSKPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKP----DIPSSK 782
Query: 181 VMS-AFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHP-PGVQPQQPPYTGAQTQA-G 237
V S A T + + P++ T + ++ S A P P + + G +++ G
Sbjct: 783 VQSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSKAIPRPASDSKIISHPGPSSESKG 842
Query: 238 QIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTS 297
Q + Q+ ++ + P +P G P P G +PT+
Sbjct: 843 QKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKG-----------SPTPP------GPRPTA 885
Query: 298 QAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTN-----------YTVAPASQ 346
P PQQ P Q + S A SQPT + + SQ
Sbjct: 886 GQTVPT----PQQSPKPQEQSRRFSLNLGSITDAPKSQPTTPQETVTGKLFGFGASIFSQ 941
Query: 347 PGMAPSQPGAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGP 397
S G QP P S PG+ M P+ P PP G P P
Sbjct: 942 ASNLISTAG--QPGPHSQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAP 990
Score = 37.0 bits (84), Expect = 0.032
Identities = 39/125 (31%), Positives = 51/125 (40%), Gaps = 13/125 (10%)
Query: 278 QQTGPQQPQQFQGYGQQPTSQ--APAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQ 335
QQ P+ + QG G+ P Q P S QP+++ +QPP + P Q T QT
Sbjct: 212 QQQPPKPIPKQQGPGRDPLQQDGTPKSISSQQPEKIKSQPPGTGKPIQGPTQ--TPQTDH 269
Query: 336 PTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPPF---GQGY 392
AS+P Q + SLP S PP P P +PP G
Sbjct: 270 AKLPLQRDASRP--QTKQADIVRGESVKPSLP-SPSKPPIQQPTP---GKPPAQQPGHEK 323
Query: 393 TQPGP 397
+QPGP
Sbjct: 324 SQPGP 328
Score = 31.2 bits (69), Expect = 1.7
Identities = 45/213 (21%), Positives = 74/213 (34%), Gaps = 28/213 (13%)
Query: 196 PSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGYGA 255
P S PD+ + PPG +P Q+ + + Q +++ G
Sbjct: 855 PKKAQTKMSPKPDAKPMPKGSPTPPGPRPTAGQTVPTPQQSPKPQEQS-RRFSLNLGSIT 913
Query: 256 QQPQAPPQQPQQ--------YGIQYSASYSQ------------QTGPQQP-QQFQGYGQQ 294
P++ P PQ+ +G + S Q+GP P +Q Q
Sbjct: 914 DAPKSQPTTPQETVTGKLFGFGASIFSQASNLISTAGQPGPHSQSGPGAPMKQAPAPSQP 973
Query: 295 PTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQP 354
PTSQ P P +GQ PA+ + + PA A+ +P AP + +P
Sbjct: 974 PTSQGP-PKSTGQAPPAPAKSIPVKKETKAPA----AEKLEP-KAEQAPTVKRTETEKKP 1027
Query: 355 GAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPP 387
+ T+ P + P +P + P
Sbjct: 1028 PPIKDSKSLTAEPQKAVLPTKLEKSPKPESTCP 1060
Score = 28.9 bits (63), Expect = 8.6
Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 7/97 (7%)
Query: 293 QQPTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPS 352
++ S F P + A P ++ ++ Y T +P + P+ P ++ S
Sbjct: 2329 ERTKSSLSETVFDHPPSSVIALPMKEQLSTTYFTSGETFGQEKPASQL--PSGSPSVS-S 2385
Query: 353 QPGAYQPRPGF--TSLPGSTMTPPPSGPNPYARNRPP 387
P +PRP F +SL S PPP P P PP
Sbjct: 2386 LPA--KPRPFFRSSSLDISAQPPPPPPPPPPPPPPPP 2420
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 64.3 bits (155), Expect = 2e-10
Identities = 62/228 (27%), Positives = 76/228 (33%), Gaps = 20/228 (8%)
Query: 190 DQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQA-----GQIEGQMY 244
+Q GPP P + P S PG QPP G Q+Q G+ EG
Sbjct: 66 NQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPP 125
Query: 245 QQYQQQAG-------------YGAQQPQAPPQQP-QQYGIQYSASYSQQTGPQQPQQFQG 290
Q Q G G Q Q PP +P + G Q P P + +G
Sbjct: 126 QGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEG 185
Query: 291 YGQQPTSQAPAPA-FSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGM 349
Q +Q+ P G+P+ P Q Q Q SQ N P PG
Sbjct: 186 PPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGK 245
Query: 350 APSQPGAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGP 397
P +P PG PPP G NP PP G+ P P
Sbjct: 246 PQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQGPPPP 293
Score = 48.9 bits (115), Expect = 8e-06
Identities = 65/232 (28%), Positives = 77/232 (33%), Gaps = 24/232 (10%)
Query: 183 SAFGLTDD--QVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQA---- 236
SA L +D Q P + P PPG +PP G Q+Q
Sbjct: 15 SAQSLNEDVSQEESPSVISGKPEGRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPR 74
Query: 237 -GQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQP 295
G+ EG Q Q G +P P QP Q G Q + P+ P QG Q
Sbjct: 75 PGKPEGPPPQGGNQSQG-PPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPP-QGGNQ-- 130
Query: 296 TSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQP- 354
SQ P P G+P+ P Q Q Q Q N + P PG P
Sbjct: 131 -SQGPPPR-PGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPP 188
Query: 355 -GAYQPRPGFTSLPGSTMTPPPSG--------PNPYARNRPPFGQGYTQPGP 397
G Q + G PG PPP G P P PP G GP
Sbjct: 189 QGGNQSQ-GPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGP 239
Score = 43.1 bits (100), Expect = 4e-04
Identities = 37/128 (28%), Positives = 45/128 (35%), Gaps = 3/128 (2%)
Query: 190 DQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQ 249
+Q GPP P + P S PG PP G Q+Q +
Sbjct: 171 NQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPS 230
Query: 250 QAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQ 309
Q G Q P P +PQ Q + P +PQ G P P PA G+PQ
Sbjct: 231 QGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPA--GKPQ 288
Query: 310 QLPAQPPQ 317
P PPQ
Sbjct: 289 G-PPPPPQ 295
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 60.8 bits (146), Expect = 2e-09
Identities = 77/313 (24%), Positives = 103/313 (32%), Gaps = 62/313 (19%)
Query: 129 PGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMS------AFDP---LKNQDEINK 179
P P P + + S+S SS S AS + +F P L ++ K
Sbjct: 367 PAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPK 426
Query: 180 NVMSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQI 239
+ GPP P R ++S AHP PP TGAQ+ A
Sbjct: 427 YTQPSLPSQAVWSQGPPPPPPYGR-------LLANSNAHPGPF----PPSTGAQSTAHPP 475
Query: 240 EGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQF----------- 288
+ +QQQ QQ Q QQ Q +G +GP P F
Sbjct: 476 VSTHHHHHQQQQQQQQQQQQQQQQQQQHHG---------NSGPPPPGAFPHPLEGGSSHH 526
Query: 289 -QGYGQQPTSQAPAPAFSGQPQQLP---AQPPQQYQASNYPAQTYTAQTSQPTNYTVAPA 344
Y P+ + P G P LP +Q N P + ++ +S T+ P
Sbjct: 527 AHPYAMSPSLGSLRPYPPG-PAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPC 585
Query: 345 SQPGMAPSQPGAYQPRP-----------------GFTSLPGSTMTPPPSGPNPYARNRPP 387
S P + GA P P S P T P GP PY + P
Sbjct: 586 SHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPS 645
Query: 388 FGQGYTQPGPGYR 400
G T PGY+
Sbjct: 646 PGAYKTATPPGYK 658
Score = 42.0 bits (97), Expect = 0.001
Identities = 53/223 (23%), Positives = 78/223 (34%), Gaps = 36/223 (16%)
Query: 192 VSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQA 251
V GP TP S++SS ++ PP P P + G A
Sbjct: 244 VGGPNGGKQHPPPTTPISVSSSGASGAPPTKPPTTP-----------VGGGNLPSAPPPA 292
Query: 252 GYGAQQPQAPPQQPQQYGIQYSASYSQQTG--------PQQPQQFQGYGQQPTSQAPAPA 303
+ P PP P + +++ G P QG G P P
Sbjct: 293 NFPHVTPNLPP-PPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPT 351
Query: 304 FSGQPQQLP------AQPPQQYQASNYPAQTYTAQTSQPTNYTVA---PASQPGMAPSQP 354
+ P LP PP ++ S+ + + A +S ++ + A PASQ PS P
Sbjct: 352 LAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQ--ALPSYP 409
Query: 355 GAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGP 397
++ P TSL S PP P ++ + QG P P
Sbjct: 410 HSFPPP---TSL--SVSNQPPKYTQPSLPSQAVWSQGPPPPPP 447
Score = 35.0 bits (79), Expect = 0.12
Identities = 45/194 (23%), Positives = 64/194 (32%), Gaps = 36/194 (18%)
Query: 193 SGPPSAPAEDRSGTPDSIASSS-SAAHPPGVQPQQ------PPYTGAQTQAGQIEGQMYQ 245
+GP P S + S + S +HP Q Q PP T + + +
Sbjct: 561 AGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIAT 620
Query: 246 QYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTG------PQQPQQFQ-----GY-GQ 293
AGY P PP YG + + + +T P P F+ GY G
Sbjct: 621 VASSPAGYKTASPPGPPP----YGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGT 676
Query: 294 QPTSQ-----------APAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVA 342
P + P P P LP+ PP ++ P + T +P
Sbjct: 677 SPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYET 736
Query: 343 PAS--QPGMAPSQP 354
P S P +PS P
Sbjct: 737 PESPVPPARSPSPP 750
Score = 32.3 bits (72), Expect = 0.78
Identities = 33/143 (23%), Positives = 54/143 (37%), Gaps = 22/143 (15%)
Query: 194 GPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGY 253
GPP P R+ +P + +++ PPG +P PP T G Y+ AG
Sbjct: 635 GPP--PYGKRAPSPGAYKTAT----PPGYKPGSPPSFRTGTPPG------YRGTSPPAGP 682
Query: 254 GAQQPQAP--------PQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFS 305
G +P +P P P + +GP P Q+P + P
Sbjct: 683 GTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGP--PLSATQIKQEPAEEYETPESP 740
Query: 306 GQPQQLPAQPPQQYQASNYPAQT 328
P + P+ PP+ ++ +Q+
Sbjct: 741 VPPARSPSPPPKVVDVPSHASQS 763
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 60.8 bits (146), Expect = 2e-09
Identities = 77/313 (24%), Positives = 103/313 (32%), Gaps = 62/313 (19%)
Query: 129 PGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMS------AFDP---LKNQDEINK 179
P P P + + S+S SS S AS + +F P L ++ K
Sbjct: 367 PAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPK 426
Query: 180 NVMSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQI 239
+ GPP P R ++S AHP PP TGAQ+ A
Sbjct: 427 YTQPSLPSQAVWSQGPPPPPPYGR-------LLANSNAHPGPF----PPSTGAQSTAHPP 475
Query: 240 EGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQF----------- 288
+ +QQQ QQ Q QQ Q +G +GP P F
Sbjct: 476 VSTHHHHHQQQQQQQQQQQQQQQQQQQHHG---------NSGPPPPGAFPHPLEGGSSHH 526
Query: 289 -QGYGQQPTSQAPAPAFSGQPQQLP---AQPPQQYQASNYPAQTYTAQTSQPTNYTVAPA 344
Y P+ + P G P LP +Q N P + ++ +S T+ P
Sbjct: 527 AHPYAMSPSLGSLRPYPPG-PAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPC 585
Query: 345 SQPGMAPSQPGAYQPRP-----------------GFTSLPGSTMTPPPSGPNPYARNRPP 387
S P + GA P P S P T P GP PY + P
Sbjct: 586 SHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPS 645
Query: 388 FGQGYTQPGPGYR 400
G T PGY+
Sbjct: 646 PGAYKTATPPGYK 658
Score = 42.0 bits (97), Expect = 0.001
Identities = 53/223 (23%), Positives = 78/223 (34%), Gaps = 36/223 (16%)
Query: 192 VSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQA 251
V GP TP S++SS ++ PP P P + G A
Sbjct: 244 VGGPNGGKQHPPPTTPISVSSSGASGAPPTKPPTTP-----------VGGGNLPSAPPPA 292
Query: 252 GYGAQQPQAPPQQPQQYGIQYSASYSQQTG--------PQQPQQFQGYGQQPTSQAPAPA 303
+ P PP P + +++ G P QG G P P
Sbjct: 293 NFPHVTPNLPP-PPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPT 351
Query: 304 FSGQPQQLP------AQPPQQYQASNYPAQTYTAQTSQPTNYTVA---PASQPGMAPSQP 354
+ P LP PP ++ S+ + + A +S ++ + A PASQ PS P
Sbjct: 352 LAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQ--ALPSYP 409
Query: 355 GAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGP 397
++ P TSL S PP P ++ + QG P P
Sbjct: 410 HSFPPP---TSL--SVSNQPPKYTQPSLPSQAVWSQGPPPPPP 447
Score = 35.0 bits (79), Expect = 0.12
Identities = 45/194 (23%), Positives = 64/194 (32%), Gaps = 36/194 (18%)
Query: 193 SGPPSAPAEDRSGTPDSIASSS-SAAHPPGVQPQQ------PPYTGAQTQAGQIEGQMYQ 245
+GP P S + S + S +HP Q Q PP T + + +
Sbjct: 561 AGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIAT 620
Query: 246 QYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTG------PQQPQQFQ-----GY-GQ 293
AGY P PP YG + + + +T P P F+ GY G
Sbjct: 621 VASSPAGYKTASPPGPPP----YGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGT 676
Query: 294 QPTSQ-----------APAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVA 342
P + P P P LP+ PP ++ P + T +P
Sbjct: 677 SPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYET 736
Query: 343 PAS--QPGMAPSQP 354
P S P +PS P
Sbjct: 737 PESPVPPARSPSPP 750
Score = 32.3 bits (72), Expect = 0.78
Identities = 33/143 (23%), Positives = 54/143 (37%), Gaps = 22/143 (15%)
Query: 194 GPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGY 253
GPP P R+ +P + +++ PPG +P PP T G Y+ AG
Sbjct: 635 GPP--PYGKRAPSPGAYKTAT----PPGYKPGSPPSFRTGTPPG------YRGTSPPAGP 682
Query: 254 GAQQPQAP--------PQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFS 305
G +P +P P P + +GP P Q+P + P
Sbjct: 683 GTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGP--PLSATQIKQEPAEEYETPESP 740
Query: 306 GQPQQLPAQPPQQYQASNYPAQT 328
P + P+ PP+ ++ +Q+
Sbjct: 741 VPPARSPSPPPKVVDVPSHASQS 763
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 58.9 bits (141), Expect = 8e-09
Identities = 54/208 (25%), Positives = 71/208 (34%), Gaps = 22/208 (10%)
Query: 190 DQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQ 249
+Q PP P + + P S PPG +PP G Q+Q
Sbjct: 45 NQPQRPPPPPGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPP----------- 93
Query: 250 QAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQ 309
P P + P Q G Q + P++P QG G Q P P G+P+
Sbjct: 94 ------PHPGKPERPPPQGGNQSQGTPPPPGKPERPPP-QG-GNQSHRPPPPP---GKPE 142
Query: 310 QLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGS 369
+ P Q Q Q Q N + + S PG P +P PG
Sbjct: 143 RPPPQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGK 202
Query: 370 TMTPPPSGPNPYARNRPPFGQGYTQPGP 397
PPP+G NP PP G+ P P
Sbjct: 203 PQGPPPAGGNPQQPQAPPAGKPQGPPPP 230
Score = 43.5 bits (101), Expect = 3e-04
Identities = 38/121 (31%), Positives = 47/121 (38%), Gaps = 7/121 (5%)
Query: 280 TGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNY 339
+G + ++ QG G QP P P G+PQ P Q Q Q P + Q N
Sbjct: 33 SGKPEGRRPQG-GNQPQRPPPPP---GKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQ 88
Query: 340 TVAPASQPGMAPSQP--GAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGP 397
+ P PG P G Q + G PG PPP G N R PP G+ P
Sbjct: 89 SQGPPPHPGKPERPPPQGGNQSQ-GTPPPPGKPERPPPQGGNQSHRPPPPPGKPERPPPQ 147
Query: 398 G 398
G
Sbjct: 148 G 148
Score = 42.4 bits (98), Expect = 8e-04
Identities = 42/146 (28%), Positives = 54/146 (36%), Gaps = 17/146 (11%)
Query: 190 DQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQA-----GQIEGQMY 244
+Q G P P + P S PPG + PP G Q+Q G+ EG
Sbjct: 108 NQSQGTPPPPGKPERPPPQGGNQSHRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPP 167
Query: 245 QQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAF 304
Q+ + A+ P PQ P Q PQ P G QQP QAP
Sbjct: 168 QEGNKSRS--ARSPPGKPQGPPQQEGNKPQGPPPPGKPQGPPPAGGNPQQP--QAPP--- 220
Query: 305 SGQPQQLP-----AQPPQQYQASNYP 325
+G+PQ P +PP+ Q P
Sbjct: 221 AGKPQGPPPPPQGGRPPRPAQGQQPP 246
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 57.8 bits (138), Expect = 2e-08
Identities = 69/263 (26%), Positives = 98/263 (37%), Gaps = 27/263 (10%)
Query: 159 QVMAASMSAFDPLKNQD-----EINKNVMSAFGLTDDQVSGPPSAPAEDRSGTPDSIASS 213
+V+ +SM +++D E+ N M+ Q P + ++ +P ++
Sbjct: 386 EVVGSSMPLIGDHQDEDKQLIVELVVNKMAQALPRQRQRDASPGRGSHGQTPSPGALPLG 445
Query: 214 SSAAHPPGVQP--QQPPYTGAQTQAG---QIEGQMYQQY---QQQAGYGAQQPQAPPQQP 265
+ P P Q+PP G Q G Q +G QQ Q Q P A P
Sbjct: 446 RQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLP 505
Query: 266 QQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQQYQASNYP 325
Q+ SA + P Q QG +P + P + +P PA P Q QA
Sbjct: 506 QRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARP---PASPSPQRQAGPPQ 562
Query: 326 A--QTYTAQTSQPTNYTVAPASQPGMAPSQ--PG-------AYQPRPGFTSLPGSTMTPP 374
A QT + + P P Q P Q PG A Q P + P +T P
Sbjct: 563 ATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPR 622
Query: 375 PSGPNPYARNRPPFGQGYTQPGP 397
PSGP P R +P Q +Q P
Sbjct: 623 PSGPGPAGRPKPQLAQKPSQDVP 645
Score = 50.8 bits (120), Expect = 2e-06
Identities = 48/151 (31%), Positives = 59/151 (39%), Gaps = 10/151 (6%)
Query: 255 AQQPQAPPQQ---PQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQL 311
+QQP PP Q P Q G Q+ GP Q+ GQQ S PA S PQ+L
Sbjct: 449 SQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRL 508
Query: 312 PAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGSTM 371
P+ Q ++ A Q Q P + P P + Q + G P +T
Sbjct: 509 PSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAG---PPQATR 565
Query: 372 TPPPSGP-NPYARNRPPFG---QGYTQPGPG 398
SGP P A PP G QG Q PG
Sbjct: 566 QTSVSGPAPPKASGAPPGGQQRQGPPQKPPG 596
Score = 43.9 bits (102), Expect = 3e-04
Identities = 57/217 (26%), Positives = 74/217 (34%), Gaps = 51/217 (23%)
Query: 194 GPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGY 253
GPP+ S P + S +SA PQQP A A +GQ Q G
Sbjct: 497 GPPAG-----SPLPQRLPSPTSA-------PQQP----ASQAAPPTQGQGRQSRPVAGGP 540
Query: 254 GAQQPQAPPQQPQQYGIQYSASYSQQTGPQQP-QQFQGYGQQPTSQAPAPAFSGQPQQLP 312
GA PP P S +Q GP Q +Q G P + AP Q Q P
Sbjct: 541 GAPPAARPPASP---------SPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPP 591
Query: 313 AQPP------QQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPG-AYQPRPGFTS 365
+PP +Q + +T T QP PS PG A +P+P
Sbjct: 592 QKPPGPAGPTRQASQAGPVPRTGPPTTQQP-------------RPSGPGPAGRPKPQLAQ 638
Query: 366 LPGSTMTPPPSG-----PNPYARNRPPFGQGYTQPGP 397
P + PP + P+P + P P
Sbjct: 639 KPSQDVPPPATAAAGGPPHPQLNKSQSLTNAFNLPEP 675
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 57.8 bits (138), Expect = 2e-08
Identities = 69/263 (26%), Positives = 98/263 (37%), Gaps = 27/263 (10%)
Query: 159 QVMAASMSAFDPLKNQD-----EINKNVMSAFGLTDDQVSGPPSAPAEDRSGTPDSIASS 213
+V+ +SM +++D E+ N M+ Q P + ++ +P ++
Sbjct: 386 EVVGSSMPLIGDHQDEDKQLIVELVVNKMAQALPRQRQRDASPGRGSHGQTPSPGALPLG 445
Query: 214 SSAAHPPGVQP--QQPPYTGAQTQAG---QIEGQMYQQY---QQQAGYGAQQPQAPPQQP 265
+ P P Q+PP G Q G Q +G QQ Q Q P A P
Sbjct: 446 RQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLP 505
Query: 266 QQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQQYQASNYP 325
Q+ SA + P Q QG +P + P + +P PA P Q QA
Sbjct: 506 QRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARP---PASPSPQRQAGPPQ 562
Query: 326 A--QTYTAQTSQPTNYTVAPASQPGMAPSQ--PG-------AYQPRPGFTSLPGSTMTPP 374
A QT + + P P Q P Q PG A Q P + P +T P
Sbjct: 563 ATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPR 622
Query: 375 PSGPNPYARNRPPFGQGYTQPGP 397
PSGP P R +P Q +Q P
Sbjct: 623 PSGPGPAGRPKPQLAQKPSQDVP 645
Score = 50.8 bits (120), Expect = 2e-06
Identities = 48/151 (31%), Positives = 59/151 (39%), Gaps = 10/151 (6%)
Query: 255 AQQPQAPPQQ---PQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQL 311
+QQP PP Q P Q G Q+ GP Q+ GQQ S PA S PQ+L
Sbjct: 449 SQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRL 508
Query: 312 PAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGSTM 371
P+ Q ++ A Q Q P + P P + Q + G P +T
Sbjct: 509 PSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAG---PPQATR 565
Query: 372 TPPPSGP-NPYARNRPPFG---QGYTQPGPG 398
SGP P A PP G QG Q PG
Sbjct: 566 QTSVSGPAPPKASGAPPGGQQRQGPPQKPPG 596
Score = 43.5 bits (101), Expect = 3e-04
Identities = 57/210 (27%), Positives = 74/210 (35%), Gaps = 51/210 (24%)
Query: 194 GPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGY 253
GPP+ S P + S +SA PQQP A A +GQ Q G
Sbjct: 497 GPPAG-----SPLPQRLPSPTSA-------PQQP----ASQAAPPTQGQGRQSRPVAGGP 540
Query: 254 GAQQPQAPPQQPQQYGIQYSASYSQQTGPQQP-QQFQGYGQQPTSQAPAPAFSGQPQQLP 312
GA PP P S +Q GP Q +Q G P + AP Q Q P
Sbjct: 541 GAPPAARPPASP---------SPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPP 591
Query: 313 AQPP------QQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPG-AYQPRPGFTS 365
+PP +Q + +T T QP PS PG A +P+P
Sbjct: 592 QKPPGPAGPTRQASQAGPVPRTGPPTTQQP-------------RPSGPGPAGRPKPQLAQ 638
Query: 366 LPGSTMTPPPSG-----PNPYARNRPPFGQ 390
P + PP + P+P + P Q
Sbjct: 639 KPSQDVPPPATAAAGGPPHPQLKASPAQAQ 668
>gi|33286444 mastermind-like 2 [Homo sapiens]
Length = 1156
Score = 57.0 bits (136), Expect = 3e-08
Identities = 79/279 (28%), Positives = 101/279 (36%), Gaps = 45/279 (16%)
Query: 145 EEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKNVMSAFG------------------ 186
+EK S S G+Q+ ++ M Q ++ N M G
Sbjct: 477 QEKIPSPSFGQQTFSPQSSPMPGVAGGSGQSKVMANYMYKAGPSAQGGHLDVLMQQKPQD 536
Query: 187 LTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHP--PGVQPQQ-PPYTGAQTQAGQIEGQM 243
L+ ++ P A + T +S A+ P V P Q P TQ Q + Q
Sbjct: 537 LSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLPSQNKPSLLHYTQQQQQQQQQ 596
Query: 244 YQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPA 303
QQ QQQ QQ Q QQ QQ Q +S S Q QQ QQ Q Q
Sbjct: 597 QQQQQQQ-----QQQQQQQQQQQQQQQQQQSSISAQ---QQQQQQSSISAQQQQQQQQQQ 648
Query: 304 FSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAP----------ASQPGMAPSQ 353
Q QQ Q QQ Q S+ PAQ+ SQP + P +QP
Sbjct: 649 QQQQQQQQQQQQQQQQQPSSQPAQSL---PSQPLLRSPLPLQQKLLLQQMQNQPIAGMGY 705
Query: 354 PGAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPPFGQGY 392
+ Q R S+ G P PS PNP + P G GY
Sbjct: 706 QVSQQQRQDQHSVVGQNTGPSPS-PNPC--SNPNTGSGY 741
Score = 31.2 bits (69), Expect = 1.7
Identities = 35/141 (24%), Positives = 51/141 (36%), Gaps = 18/141 (12%)
Query: 212 SSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGYGAQQ--PQAPPQQPQQYG 269
S S PP P A + + I Q Q Q G GA + P Q
Sbjct: 377 SGSPQLRPPSAGPAFSMANSALSTSSPIPSVPQSQAQPQTGSGASRALPSWQEVSHAQQL 436
Query: 270 IQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQTY 329
Q +A+ Q QQ QQ QPT+ + P+ +G P + P+ ++
Sbjct: 437 KQIAANRQQHARMQQHQQ----QHQPTNWSALPSSAG-------PSPGPFGQEKIPSPSF 485
Query: 330 TAQTSQPTNYTVAPASQPGMA 350
QT P + + PG+A
Sbjct: 486 GQQTFSPQS-----SPMPGVA 501
>gi|162951884 R3H domain containing 2 [Homo sapiens]
Length = 976
Score = 57.0 bits (136), Expect = 3e-08
Identities = 62/232 (26%), Positives = 81/232 (34%), Gaps = 46/232 (19%)
Query: 204 SGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIE------------GQMYQQYQQQA 251
+G P ++ S+++H P Q PP G QI+ Q Y+
Sbjct: 482 TGQPLPTSNYSTSSHAPPTQQVLPPQ-GYMQPPQQIQVSYYPPGQYPNSNQQYRPLSHPV 540
Query: 252 GYGAQQPQAPPQQPQQYGI------QYSASYSQQTGPQQPQ--------------QFQG- 290
Y Q+ Q PQ QQ G+ Q A+Y G QQPQ Q QG
Sbjct: 541 AYSPQRGQQLPQPSQQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGL 600
Query: 291 ---YGQQPTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQP 347
Y P+ Q P + S Q P Q P S Q P Y++ P
Sbjct: 601 VVQYTPLPSYQVPVGSDSQNVVQPPFQQPMLVPVSQ-SVQGGLPAAGVPVYYSMIP---- 655
Query: 348 GMAPSQPGAYQPRPGFTSLPGSTMTPPPSGPNPYA-RNRPPFGQGYTQPGPG 398
P+Q P GF PGS P P+P + P G + GPG
Sbjct: 656 ---PAQQNGTSPSVGFLQPPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGPG 704
Score = 43.1 bits (100), Expect = 4e-04
Identities = 59/227 (25%), Positives = 76/227 (33%), Gaps = 63/227 (27%)
Query: 195 PPSAPAEDRSGTP-----DSIASSSSAA----HPPGVQPQQPPYTGAQTQAGQIEGQMYQ 245
PP A SG DSI SS + PG+ P T + + G +
Sbjct: 342 PPVTKASSFSGISILTRGDSIGSSKGGSAGRISRPGMALGAPEVCNQVTSSQSVRGLLPC 401
Query: 246 QYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAP--- 302
QQQ QQ A P PQQ + SQ P +Q +++A P
Sbjct: 402 TAQQQQQQQQQQLPALPPTPQQQPPLNNHMISQADDLSNPFGQMSLSRQGSTEAADPSAA 461
Query: 303 ------------------AFSGQP----------------QQLP----AQPPQQYQASNY 324
A +GQP Q LP QPPQQ Q S Y
Sbjct: 462 LFQTPLISQHPQQTSFIMASTGQPLPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYY 521
Query: 325 PAQTY--TAQTSQPTNYTVA-----------PASQPGMAPSQPGAYQ 358
P Y + Q +P ++ VA P+ QPG+ P P Q
Sbjct: 522 PPGQYPNSNQQYRPLSHPVAYSPQRGQQLPQPSQQPGLQPMMPNQQQ 568
>gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]
Length = 788
Score = 56.2 bits (134), Expect = 5e-08
Identities = 74/257 (28%), Positives = 86/257 (33%), Gaps = 36/257 (14%)
Query: 172 KNQDEINKNVMSAFGLTDDQVSG------PPSAPAEDRSGTPDSIAS----SSSAAHPPG 221
K+Q ++ + + LT +G PP P + G A S S PPG
Sbjct: 73 KSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMGQPMSLSGQPPPG 132
Query: 222 VQPQQP----------PYTGAQTQAGQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQ 271
P P T Q Q ++ Q QQ QQ A Q Q QQ QQ+ Q
Sbjct: 133 TSGMAPHSMAVVSTATPQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQQQQQQFQAQ 192
Query: 272 YSASYSQ-QTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQQYQ-------ASN 323
SA Q Q QQ QQ Q QQ Q Q QQ Q QQ Q
Sbjct: 193 QSAMQQQFQAVVQQQQQLQ---QQQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQ 249
Query: 324 YPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGST---MTPPPSGPNP 380
Q Q Q P QP M QP Q P T PP P
Sbjct: 250 QQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQMHHTQHHQPPPQPQQPP 309
Query: 381 YARNRPPF--GQGYTQP 395
A+N+P Q TQP
Sbjct: 310 VAQNQPSQLPPQSQTQP 326
Score = 48.9 bits (115), Expect = 8e-06
Identities = 53/159 (33%), Positives = 60/159 (37%), Gaps = 17/159 (10%)
Query: 223 QPQQPPYTGAQTQAGQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGP 282
Q QQ AQ Q Q + Q QQ QQQ A Q Q P QQP +Q Q P
Sbjct: 233 QQQQQLQRIAQLQLQQQQQQQQQQQQQQQQ--ALQAQPPIQQPP---MQQPQPPPSQALP 287
Query: 283 QQPQQFQ--GYGQQPTSQAPAPAFSGQPQQLPAQ---PPQQYQASNYPAQTYTAQTSQPT 337
QQ QQ + Q P P QP QLP Q P QA P Q T P
Sbjct: 288 QQLQQMHHTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQ--MLYTQPPL 345
Query: 338 NYTVAP--ASQPGMAPSQPGAYQPRPGFTSLPGSTMTPP 374
+ AP QP P QP Q + + + M P
Sbjct: 346 KFVRAPMVVQQP---PVQPQVQQQQTAVQTAQAAQMVAP 381
Score = 43.5 bits (101), Expect = 3e-04
Identities = 61/234 (26%), Positives = 86/234 (36%), Gaps = 27/234 (11%)
Query: 172 KNQDEINKNVMSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTG 231
+NQ +I + + Q+ + + ++ + PP QPQ PP
Sbjct: 226 QNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPP--- 282
Query: 232 AQTQAGQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGP--QQPQQFQ 289
+Q Q++ QM+ Q QQP QP Q Q QT P Q Q
Sbjct: 283 SQALPQQLQ-QMHHTQHHQPPPQPQQPPVAQNQPSQLPPQ------SQTQPLVSQAQALP 335
Query: 290 G---YGQQPTSQAPAPAFSGQPQQLPAQPP-QQYQASNYPAQTYTAQTSQPTNYTVAPA- 344
G Y Q P AP QP P QP QQ Q + AQ AQ P + A
Sbjct: 336 GQMLYTQPPLKFVRAPMVVQQP---PVQPQVQQQQTAVQTAQ--AAQMVAPGVQMITEAL 390
Query: 345 SQPGMAPSQPGAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGPG 398
+Q GM + P +++P S++ P G P A+ + P PG
Sbjct: 391 AQGGM--HIRARFPPTTAVSAIPSSSI---PLGRQPMAQVSQSSLPMLSSPSPG 439
Score = 40.8 bits (94), Expect = 0.002
Identities = 58/228 (25%), Positives = 79/228 (34%), Gaps = 71/228 (31%)
Query: 218 HPPGVQPQQPPYTGAQ--------------TQAGQIEGQMYQQYQQ------QAGYGAQQ 257
H P QPQQPP Q +QA + GQM Y Q +A QQ
Sbjct: 299 HQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQML--YTQPPLKFVRAPMVVQQ 356
Query: 258 PQAPPQQPQQYGIQYSASYSQQTGPQQ---------------------------PQQFQG 290
P PQ QQ +A +Q P P
Sbjct: 357 PPVQPQVQQQQTAVQTAQAAQMVAPGVQMITEALAQGGMHIRARFPPTTAVSAIPSSSIP 416
Query: 291 YGQQPTSQ----------APAPAFSGQ-PQQLPAQP---PQQYQASNYP-AQTYTAQTSQ 335
G+QP +Q +P+P Q PQ +P P PQ Q S+ P + +
Sbjct: 417 LGRQPMAQVSQSSLPMLSSPSPGQQVQTPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPS 476
Query: 336 PTNYTVAPASQPGMAPSQPGAYQ----PRPGFTSL---PGSTMTPPPS 376
P+++ +P+ QP +P Q P PG + P S M+P S
Sbjct: 477 PSSFLPSPSPQPSQSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGS 524
>gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens]
Length = 748
Score = 56.2 bits (134), Expect = 5e-08
Identities = 74/257 (28%), Positives = 86/257 (33%), Gaps = 36/257 (14%)
Query: 172 KNQDEINKNVMSAFGLTDDQVSG------PPSAPAEDRSGTPDSIAS----SSSAAHPPG 221
K+Q ++ + + LT +G PP P + G A S S PPG
Sbjct: 73 KSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMGQPMSLSGQPPPG 132
Query: 222 VQPQQP----------PYTGAQTQAGQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQ 271
P P T Q Q ++ Q QQ QQ A Q Q QQ QQ+ Q
Sbjct: 133 TSGMAPHSMAVVSTATPQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQQQQQQFQAQ 192
Query: 272 YSASYSQ-QTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQQYQ-------ASN 323
SA Q Q QQ QQ Q QQ Q Q QQ Q QQ Q
Sbjct: 193 QSAMQQQFQAVVQQQQQLQ---QQQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQ 249
Query: 324 YPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGST---MTPPPSGPNP 380
Q Q Q P QP M QP Q P T PP P
Sbjct: 250 QQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQMHHTQHHQPPPQPQQPP 309
Query: 381 YARNRPPF--GQGYTQP 395
A+N+P Q TQP
Sbjct: 310 VAQNQPSQLPPQSQTQP 326
Score = 52.0 bits (123), Expect = 9e-07
Identities = 61/232 (26%), Positives = 81/232 (34%), Gaps = 28/232 (12%)
Query: 172 KNQDEINKNVMSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTG 231
+NQ +I + + Q+ + + ++ + PP QPQ PP
Sbjct: 226 QNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPP--- 282
Query: 232 AQTQAGQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGP--QQPQQFQ 289
+Q Q++ QM+ Q QQP QP Q Q QT P Q Q
Sbjct: 283 SQALPQQLQ-QMHHTQHHQPPPQPQQPPVAQNQPSQLPPQ------SQTQPLVSQAQALP 335
Query: 290 G---YGQQPTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQ 346
G Y Q P AP + QPP Q Q TAQ +Q VAP Q
Sbjct: 336 GQMLYTQPPLKFVRAP-------MVVQQPPVQPQVQQQQTAVQTAQAAQ----MVAPGVQ 384
Query: 347 PGMAPSQPGAYQPRPGFTSLPGSTMTPPPS-GPNPYARNRPPFGQGYTQPGP 397
+ S P P PG +M PPP P P + P + P P
Sbjct: 385 VSQS-SLPMLSSPSPGQQVQTPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAP 435
Score = 50.1 bits (118), Expect = 4e-06
Identities = 52/186 (27%), Positives = 71/186 (38%), Gaps = 27/186 (14%)
Query: 218 HPPGVQPQQPPYTGAQ--------------TQAGQIEGQM-YQQYQQQAGYGAQQPQAPP 262
H P QPQQPP Q +QA + GQM Y Q + Q PP
Sbjct: 299 HQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQMLYTQPPLKFVRAPMVVQQPP 358
Query: 263 QQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQ-PQQLPAQP---PQQ 318
QPQ Q + +Q P P +P+P Q PQ +P P PQ
Sbjct: 359 VQPQVQQQQTAVQTAQAAQMVAPGVQVSQSSLPMLSSPSPGQQVQTPQSMPPPPQPSPQP 418
Query: 319 YQASNYP-AQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQ----PRPGFTSL---PGST 370
Q S+ P + + P+++ +P+ QP +P Q P PG + P S
Sbjct: 419 GQPSSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQNFSVPSPGPLNTPVNPSSV 478
Query: 371 MTPPPS 376
M+P S
Sbjct: 479 MSPAGS 484
>gi|5454064 RNA binding motif protein 14 [Homo sapiens]
Length = 669
Score = 55.8 bits (133), Expect = 7e-08
Identities = 55/187 (29%), Positives = 75/187 (40%), Gaps = 14/187 (7%)
Query: 198 APAEDRSGTPDSIASSSSAAHP-PGVQPQQPPYT--GAQTQAGQIEGQMYQQYQQQAGYG 254
AP + +P S ++++S+ P G QP + G Q A Q A YG
Sbjct: 283 APYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGGQAAAASSLNSYGAQGSSLASYG 342
Query: 255 AQQPQAPPQQPQQYGIQYSASYSQQTGPQQP-----QQFQGYGQQPTSQAPAPAFSGQPQ 309
Q Q YG++ +AS G Q YG Q S A + A+ Q
Sbjct: 343 NQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQAASYGAQ--SAASSLAYGAQAA 400
Query: 310 QLPAQPPQQY--QASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLP 367
AQP Y Q++ Y AQ + +SQP Y PA+ A SQP AY + T +
Sbjct: 401 SYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQPATAAAYA-SQPAAYAAQ-ATTPMA 458
Query: 368 GSTMTPP 374
GS P
Sbjct: 459 GSYGAQP 465
Score = 47.4 bits (111), Expect = 2e-05
Identities = 43/141 (30%), Positives = 58/141 (41%), Gaps = 20/141 (14%)
Query: 249 QQAGYGAQQPQ---APPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTS----QAPA 301
Q A YGAQ A Q Y Q SASY+ Q+ P QQ Y QP + A A
Sbjct: 380 QAASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQPATA 439
Query: 302 PAFSGQPQQLPAQPPQQYQASNYPAQ--------TYTAQTSQPTNYTVAPASQPGMAPSQ 353
A++ QP AQ A +Y AQ +Y AQ S + + S A +
Sbjct: 440 AAYASQPAAYAAQATTP-MAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQS----AAAA 494
Query: 354 PGAYQPRPGFTSLPGSTMTPP 374
G+Y + + P +T+ P
Sbjct: 495 TGSYGAAAAYGAQPSATLAAP 515
Score = 46.2 bits (108), Expect = 5e-05
Identities = 61/207 (29%), Positives = 76/207 (36%), Gaps = 19/207 (9%)
Query: 184 AFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQM 243
A+G + PSA +S P + ++S + P QP A A Q
Sbjct: 394 AYGAQAASYNAQPSASYNAQSA-PYAAQQAASYSSQPAAYVAQPATAAAY--ASQPAAYA 450
Query: 244 YQQYQQQAG-YGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAP 302
Q AG YGAQ Q YG Q S S G Q G S A
Sbjct: 451 AQATTPMAGSYGAQP--VVQTQLNSYGAQASMGLSGSYGAQSAAAATG------SYGAAA 502
Query: 303 AFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPG 362
A+ QP A P + Q+S A +Y AQ Q + QPG A GA QP
Sbjct: 503 AYGAQPSATLAAP-YRTQSSASLAASYAAQ--QHPQAAASYRGQPGNA--YDGAGQPSAA 557
Query: 363 FTSLPGSTMTPPPSGPNPYARNR--PP 387
+ S+ + S P PY R R PP
Sbjct: 558 YLSMSQGAVANANSTPPPYERTRLSPP 584
>gi|57165375 glutamate receptor, ionotropic, N-methyl
D-aspartate-associated protein 1 [Homo sapiens]
Length = 371
Score = 55.5 bits (132), Expect = 9e-08
Identities = 44/132 (33%), Positives = 49/132 (37%), Gaps = 10/132 (7%)
Query: 218 HPPGVQPQ-----QPPYTGAQTQAGQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQY 272
+P G QP QPPY GA + Y Q G PQ P G
Sbjct: 21 YPGGPQPPMPPYAQPPYPGAPYPQPPFQPSPYGQPGYPHGPSPYPQGGYPQGPYPQGGYP 80
Query: 273 SASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFS-GQPQQLPAQPPQQYQASNY----PAQ 327
Y Q+ PQ P GY Q P Q+P P GQPQ P Q P Q NY P
Sbjct: 81 QGPYPQEGYPQGPYPQGGYPQGPYPQSPFPPNPYGQPQVFPGQDPDSPQHGNYQEEGPPS 140
Query: 328 TYTAQTSQPTNY 339
Y Q TN+
Sbjct: 141 YYDNQDFPATNW 152
Score = 29.6 bits (65), Expect = 5.0
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 8/72 (11%)
Query: 334 SQPTNYTVAPASQPGMAPSQPGAYQP-RPGFTS--LPGSTMTPPPSGPNPYARNRPPFG- 389
S ++ V+ + P P PG QP P + PG+ PP P+PY + P G
Sbjct: 2 SHEKSFLVSGDNYPPPNPGYPGGPQPPMPPYAQPPYPGAPYPQPPFQPSPYGQPGYPHGP 61
Query: 390 ----QGYTQPGP 397
QG GP
Sbjct: 62 SPYPQGGYPQGP 73
>gi|57165373 glutamate receptor, ionotropic, N-methyl
D-aspartate-associated protein 1 [Homo sapiens]
Length = 371
Score = 55.5 bits (132), Expect = 9e-08
Identities = 44/132 (33%), Positives = 49/132 (37%), Gaps = 10/132 (7%)
Query: 218 HPPGVQPQ-----QPPYTGAQTQAGQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQY 272
+P G QP QPPY GA + Y Q G PQ P G
Sbjct: 21 YPGGPQPPMPPYAQPPYPGAPYPQPPFQPSPYGQPGYPHGPSPYPQGGYPQGPYPQGGYP 80
Query: 273 SASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFS-GQPQQLPAQPPQQYQASNY----PAQ 327
Y Q+ PQ P GY Q P Q+P P GQPQ P Q P Q NY P
Sbjct: 81 QGPYPQEGYPQGPYPQGGYPQGPYPQSPFPPNPYGQPQVFPGQDPDSPQHGNYQEEGPPS 140
Query: 328 TYTAQTSQPTNY 339
Y Q TN+
Sbjct: 141 YYDNQDFPATNW 152
Score = 29.6 bits (65), Expect = 5.0
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 8/72 (11%)
Query: 334 SQPTNYTVAPASQPGMAPSQPGAYQP-RPGFTS--LPGSTMTPPPSGPNPYARNRPPFG- 389
S ++ V+ + P P PG QP P + PG+ PP P+PY + P G
Sbjct: 2 SHEKSFLVSGDNYPPPNPGYPGGPQPPMPPYAQPPYPGAPYPQPPFQPSPYGQPGYPHGP 61
Query: 390 ----QGYTQPGP 397
QG GP
Sbjct: 62 SPYPQGGYPQGP 73
>gi|148277037 AP2 associated kinase 1 [Homo sapiens]
Length = 961
Score = 55.1 bits (131), Expect = 1e-07
Identities = 64/201 (31%), Positives = 71/201 (35%), Gaps = 23/201 (11%)
Query: 195 PPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGYG 254
PPS P P + A A PP PQQ P T AQ Q + Q Q
Sbjct: 423 PPSQPL------PQTQAKQPQA--PP--TPQQTPSTQAQGLPAQAQATPQHQQQLFLKQQ 472
Query: 255 AQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPT-SQAPAPAFSGQPQQLPA 313
QQ Q PP Q Q G Y QQ QQ Q QQP +Q P + G QQL
Sbjct: 473 QQQQQPPPAQQQPAGTFYQ---QQQAQTQQFQAVHPATQQPAIAQFPVVSQGGSQQQLMQ 529
Query: 314 ---QPPQQYQASNYPAQTYTA-QTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGS 369
Q QQ Q Q TA Q A +P MA Q QP+P P
Sbjct: 530 NFYQQQQQQQQQQQQQQLATALHQQQLMTQQAALQQKPTMAAGQQP--QPQPAAAPQPAP 587
Query: 370 TMTPPPSGP---NPYARNRPP 387
P P P + PP
Sbjct: 588 AQEPAIQAPVRQQPKVQTTPP 608
Score = 45.1 bits (105), Expect = 1e-04
Identities = 57/201 (28%), Positives = 71/201 (35%), Gaps = 21/201 (10%)
Query: 169 DPLKNQDEINKNVMSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPP 228
+P+K + K LTD P + S P + PG+ P QP
Sbjct: 335 EPVKASEAAAKKTQPKARLTDP-------IPTTETSIAPRQRPKAGQTQPNPGILPIQPA 387
Query: 229 YTGAQTQAGQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQT--GPQQPQ 286
T + Q Q Q G A PQ PQ P + + + Q PQQ
Sbjct: 388 LTPRKRATVQPPPQAAGS-SNQPGLLASVPQPKPQAPPSQPLPQTQAKQPQAPPTPQQTP 446
Query: 287 QFQGYG----QQPTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVA 342
Q G Q T Q F Q QQ PP Q Q + Q AQT Q V
Sbjct: 447 STQAQGLPAQAQATPQHQQQLFLKQQQQQQQPPPAQQQPAGTFYQQQQAQTQQ--FQAVH 504
Query: 343 PAS-QPGMAP----SQPGAYQ 358
PA+ QP +A SQ G+ Q
Sbjct: 505 PATQQPAIAQFPVVSQGGSQQ 525
Score = 35.8 bits (81), Expect = 0.070
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 11/107 (10%)
Query: 298 QAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYT--AQTSQP---TNYTVAPASQP--GMA 350
+ P P P +PA+ P+ +AS A+ A+ + P T ++AP +P G
Sbjct: 318 ECPIPNVQNSP--IPAKLPEPVKASEAAAKKTQPKARLTDPIPTTETSIAPRQRPKAGQT 375
Query: 351 PSQPGAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGP 397
PG +P T +T+ PPP + N+P QP P
Sbjct: 376 QPNPGILPIQPALTPRKRATVQPPPQAAG--SSNQPGLLASVPQPKP 420
>gi|124378039 SEC16 homolog A [Homo sapiens]
Length = 2357
Score = 54.7 bits (130), Expect = 1e-07
Identities = 77/308 (25%), Positives = 118/308 (38%), Gaps = 48/308 (15%)
Query: 123 LEPPGEPGPSTNIPENDTVDGREEKS-------ASDSSGKQSTQVMAASMSAFDPLKNQD 175
++PP +P P +PE+ ++ K+ A+ +G S ++ + P N+
Sbjct: 926 VQPPSQPVPENLVPESQ----KDRKAGSALPGFANSPAGSTSVVLVPPAHGTLVPDGNKA 981
Query: 176 EINKNVMSAFGLTDDQVSGPPSAPAEDRSGT-PDSIASSSS-AAHPPGVQPQQPPYTGAQ 233
+ + +G D +S P + + DS+AS S A+HP P P
Sbjct: 982 NHSSHQEDTYGALDFTLSRTLENPVNVYNPSHSDSLASQQSVASHPRQSGPGAPNLDRFY 1041
Query: 234 TQAGQ-IEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQ-PQQFQGY 291
Q + +GQ + QQ QQ +PPQ P+ A +S+ + P+ P Q Q
Sbjct: 1042 QQVTKDAQGQPGLERAQQELVPPQQQASPPQLPK-------AMFSELSNPESLPAQGQA- 1093
Query: 292 GQQPTSQAPAP-AFSGQPQQLPAQPPQQYQASNYPAQTYTA--QTSQPTNYTVAPASQPG 348
Q ++Q+PA QQLP +PPQ S + + A + QP V PA PG
Sbjct: 1094 --QNSAQSPASLVLVDAGQQLPPRPPQSSSVSLVSSGSGQAAVPSEQPWPQPV-PALAPG 1150
Query: 349 MAPSQPGA-YQPRPGFTSLPGSTMTPPPSGP------------------NPYARNRPPFG 389
P A Y RP + + P P P PY +
Sbjct: 1151 PPPQDLAAYYYYRPLYDAYQPQYSLPYPPEPGAASLYYQDVYSLYEPRYRPYDGAASAYA 1210
Query: 390 QGYTQPGP 397
Q Y P P
Sbjct: 1211 QNYRYPEP 1218
Score = 40.4 bits (93), Expect = 0.003
Identities = 42/189 (22%), Positives = 67/189 (35%), Gaps = 14/189 (7%)
Query: 200 AEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGYGAQQP- 258
A R + SSS + PP +Q P G G + + + Q G +P
Sbjct: 56 AFSRQALQSTPLGSSSKSSPPVLQGPAP--AGFSQHPGLLVPHTHARDSSQ---GPCEPL 110
Query: 259 QAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQQ 318
P QP+ + +S + + + P P+ + P+S+ P +P P+
Sbjct: 111 PGPLTQPRAHASPFSGALTP-SAPPGPEMNRSAEVGPSSEPEVQTLPYLPHYIPGVDPET 169
Query: 319 ----YQASNYPAQTYTAQTSQPTNYTVAPASQPGMAP---SQPGAYQPRPGFTSLPGSTM 371
+ N P P + V PA+ P + PG + P G G
Sbjct: 170 SHGGHPHGNMPGLDRPLSRQNPHDGVVTPAASPSLPQPGLQMPGQWGPVQGGPQPSGQHR 229
Query: 372 TPPPSGPNP 380
+P P GP P
Sbjct: 230 SPCPEGPVP 238
Score = 37.0 bits (84), Expect = 0.032
Identities = 55/261 (21%), Positives = 87/261 (33%), Gaps = 63/261 (24%)
Query: 128 EPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKNVMSAFGL 187
+P P P + + G++ ++ S ++ QS + AS
Sbjct: 752 KPQPPVVQPPEEAMSGQQSRNPSSAAPVQSRGGIGAS----------------------- 788
Query: 188 TDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQY 247
+ + PP E+ + S +S + PP Q PP AQ
Sbjct: 789 --ENLENPPKMGEEEALQSQASSGYASLLSSPPTESLQNPPVLIAQPDHS---------- 836
Query: 248 QQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPA------ 301
Y QP I +S S S Q + G +P + A
Sbjct: 837 -----YNLAQP-----------INFSVSLSNSHEKNQSWREALVGDRPAVSSWALGGDSG 880
Query: 302 --PAFSGQPQQ--LPAQPPQQYQASNYPAQTYTAQ--TSQPTNYTVAPASQPGMAPSQPG 355
+ SG P L P SN+P + ++ ++QP N V P SQP P
Sbjct: 881 ENTSLSGIPTSSVLSLSLPSSVAQSNFPQGSGASEMVSNQPANLLVQPPSQPVPENLVPE 940
Query: 356 AYQPRPGFTSLPGSTMTPPPS 376
+ + R ++LPG +P S
Sbjct: 941 SQKDRKAGSALPGFANSPAGS 961
Score = 28.9 bits (63), Expect = 8.6
Identities = 45/217 (20%), Positives = 75/217 (34%), Gaps = 36/217 (16%)
Query: 206 TPDSIASSSSAAHPPGVQ-----PQQPPYTGAQTQAGQIEGQMYQQYQQQAGYGA----- 255
TP S A PPG P QPP + + + GQ ++ ++ G
Sbjct: 2054 TPSRTVPDSEA--PPGWDRADSGPTQPPLSLSPAPETKRPGQAAKKETKEPKKGESWFFR 2111
Query: 256 -----QQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQ 310
++ +A + I + +Q +P++ +AP P + P+
Sbjct: 2112 WLPGKKKTEAYLPDDKNKSIVWDEKKNQWVNLNEPEE--------EKKAPPPPPTSMPKT 2163
Query: 311 LPAQPPQQYQASNYPAQTYT-------AQTSQPTNYTVAPASQPGMAPSQ---PGAYQPR 360
+ A PP P Y+ A+ N + S+P +AP+ P A P
Sbjct: 2164 VQAAPPALPGPPGAPVNMYSRRAAGTRARYVDVLNPSGTQRSEPALAPADFVAPLAPLPI 2223
Query: 361 PGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGP 397
P +P + P P+ R P +G P P
Sbjct: 2224 PSNLFVP-TPDAEEPQLPDGTGREGPAAARGLANPEP 2259
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 54.3 bits (129), Expect = 2e-07
Identities = 79/304 (25%), Positives = 106/304 (34%), Gaps = 75/304 (24%)
Query: 126 PGEPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKNVMSAF 185
PG PGP+ GR + S D + Q+ + P + + ++
Sbjct: 445 PGTPGPTM---------GRSQGSPMDPMVMKRPQLYGMGSN---PHSQPQQSSPYPGGSY 492
Query: 186 GLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQ 245
G GP P + TP ++A +P Q Q PP G Q +G +
Sbjct: 493 G-----PPGPQRYPIGIQGRTPGAMAGMQ---YP---QQQMPPQYGQQGVSGYCQ----- 536
Query: 246 QYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQT-GPQQPQQFQGYGQQPTSQAPA--- 301
Q Q Y +QQPQ P PQ QY S SQQ PQQ +GYG + SQ P
Sbjct: 537 --QGQQPYYSQQPQPPHLPPQA---QYLPSQSQQRYQPQQDMSQEGYGTR--SQPPLAPG 589
Query: 302 ------------------PAFSGQPQQLPA--------------QPPQQYQASNYPAQTY 329
P SG LP Q SN PAQ+
Sbjct: 590 KPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSN-PAQSP 648
Query: 330 TAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGF---TSLPGSTMTPPPSGPNPYARNRP 386
+ + P ++ P S G+ Q R G S+PGS M P P G + + P
Sbjct: 649 FSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHP 708
Query: 387 PFGQ 390
Q
Sbjct: 709 ALSQ 712
Score = 46.6 bits (109), Expect = 4e-05
Identities = 77/302 (25%), Positives = 101/302 (33%), Gaps = 45/302 (14%)
Query: 122 SLEPPGEPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKNV 181
S PP P + G ++ +A GK AA+ A+ + + +
Sbjct: 386 SAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSP 445
Query: 182 MSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQP-PYTGAQTQAGQIE 240
+ G T + G P P + + S+ P QPQQ PY G G
Sbjct: 446 GTP-GPTMGRSQGSPMDPMVMKRPQLYGMGSN------PHSQPQQSSPYPGGSY--GPPG 496
Query: 241 GQMYQQYQQQAGYGAQQPQAPPQQ--PQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQ 298
Q Y Q GA PQQ P QYG Q + Y QQ QQP Y QQP
Sbjct: 497 PQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQG--QQPY----YSQQPQP- 549
Query: 299 APAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQP---------TNYTVAPASQPGM 349
P Q Q LP+Q Q+YQ +Q SQP + + +P
Sbjct: 550 ---PHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSS 606
Query: 350 APSQPGAYQPRP--------------GFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQP 395
P G+ P G TS G P S +P+A G P
Sbjct: 607 LPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSP 666
Query: 396 GP 397
P
Sbjct: 667 SP 668
Score = 42.0 bits (97), Expect = 0.001
Identities = 44/143 (30%), Positives = 53/143 (37%), Gaps = 21/143 (14%)
Query: 218 HPPGVQPQQPPYTGAQT-----QAGQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQY 272
H PG+ PQQP Y A + EG MY Y +QQ + QYG Y
Sbjct: 1343 HQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQ-----YSSQQQE----MYNQYGGSY 1393
Query: 273 SAS-----YSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQ 327
S Q P ++ QG GQ T P G Q ++ PQQ +
Sbjct: 1394 SGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDM 1453
Query: 328 TYTAQTSQ-PTNYTVAPASQPGM 349
Y Q Q P T AP PGM
Sbjct: 1454 PYPYQNRQGPGGPTQAP-PYPGM 1475
Score = 38.5 bits (88), Expect = 0.011
Identities = 52/201 (25%), Positives = 65/201 (32%), Gaps = 42/201 (20%)
Query: 233 QTQAGQIEGQMYQQYQQQ-----------AGYGAQQPQAPPQQPQQYGIQYSASYSQQTG 281
Q Q Q + Q QQ QQQ AG GA QP +QPQ G + SA+ Q
Sbjct: 56 QQQQQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADP 115
Query: 282 PQQP----------------------QQFQGYGQQPTSQAP--APAFSGQPQQLPAQPPQ 317
P P + G G T Q P P G P +P
Sbjct: 116 PGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEF--N 173
Query: 318 QYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGSTMTPPPSG 377
Y S PA + P PGM + PGS M P +
Sbjct: 174 NYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGM----MHSASAAAAGAPGS-MDPLQNS 228
Query: 378 PNPYARNRPPFGQGYTQPGPG 398
Y ++ GY++PG G
Sbjct: 229 HEGYPNSQCNHYPGYSRPGAG 249
Score = 36.2 bits (82), Expect = 0.054
Identities = 69/261 (26%), Positives = 93/261 (35%), Gaps = 47/261 (18%)
Query: 148 SASDSSGKQSTQVMAASMSAFDPLKNQDEINKNVMSAFGLTDDQVSGPPSAPAEDRS--- 204
SA+ S KQ Q + A ++ +E V S G T Q P +PA S
Sbjct: 1118 SAASSLKKQYIQYLFAFECK---IERGEEPPPEVFST-GDTKKQPKLQPPSPANSGSLQG 1173
Query: 205 -GTPDSIASSSSAAHPPGVQPQQPPYT--GAQT--QAGQIEG-QMYQQYQQQAGYG---- 254
TP S S+S A P ++P P T G T Q G+ ++ + +
Sbjct: 1174 PQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKR 1233
Query: 255 -AQQPQAPPQQ----PQQYG-IQYSASYSQQTG----PQQPQQFQGYGQQPTS------- 297
+ P AP QQ P G + Y + G P + F GQ P S
Sbjct: 1234 NSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYN 1293
Query: 298 QAPAPAFS----GQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQ 353
Q+P+ A S GQ QQ P + Y Q Y Q P+ QP Q
Sbjct: 1294 QSPSGAMSNLGMGQRQQFPYGASYDRRHEPY-GQQYPGQGP--------PSGQPPYGGHQ 1344
Query: 354 PGAYQPRPGFTSLPGSTMTPP 374
PG Y +P + PP
Sbjct: 1345 PGLYPQQPNYKRHMDGMYGPP 1365
Score = 36.2 bits (82), Expect = 0.054
Identities = 46/212 (21%), Positives = 71/212 (33%), Gaps = 29/212 (13%)
Query: 196 PSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGYGA 255
P + +R P I + G Q G Q M YQ + G G
Sbjct: 1406 PYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGG 1465
Query: 256 QQPQAPPQQ----------PQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFS 305
QAPP P Q I + + + +QP QP ++ P P++
Sbjct: 1466 PT-QAPPYPGMNRTDDMMVPDQR-INHESQWPSHVSQRQPYMSSSASMQPITRPPQPSY- 1522
Query: 306 GQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTS 365
Q P P + PA + ++ ++P+ P + + P +
Sbjct: 1523 ----QTPPSLPNHISRAPSPASFQRSLENR-----MSPSKSPFLPSMKMQKVMP-----T 1568
Query: 366 LPGSTMTPPPSGPNPYAR--NRPPFGQGYTQP 395
+P S +T PP P P R PP +QP
Sbjct: 1569 VPTSQVTGPPPQPPPIRREITFPPGSVEASQP 1600
Score = 35.4 bits (80), Expect = 0.092
Identities = 61/234 (26%), Positives = 79/234 (33%), Gaps = 69/234 (29%)
Query: 188 TDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGA-----QTQAGQIEGQ 242
T +Q+ PS G+ +S S+ PP Q GA Q AG G+
Sbjct: 360 TLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGK 419
Query: 243 -MYQQY---------QQQAGYGAQQPQAP----------------PQQPQQYGI------ 270
M QY QQ + A P P ++PQ YG+
Sbjct: 420 DMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHS 479
Query: 271 --QYSASY-SQQTGPQQPQQF----QG-------------------YGQQPTS----QAP 300
Q S+ Y GP PQ++ QG YGQQ S Q
Sbjct: 480 QPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQ 539
Query: 301 APAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQP 354
P +S QPQ P PPQ + Q Y Q + SQP +AP +P
Sbjct: 540 QPYYSQQPQP-PHLPPQAQYLPSQSQQRYQPQQDM-SQEGYGTRSQPPLAPGKP 591
Score = 31.6 bits (70), Expect = 1.3
Identities = 34/141 (24%), Positives = 47/141 (33%), Gaps = 24/141 (17%)
Query: 256 QQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQP 315
+QP+ P P G Q TG + G + PT PA + Q P Q
Sbjct: 1156 KQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPT-----PASTPHGQMTPMQG 1210
Query: 316 PQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGSTMTPPP 375
+ S + + + +S P ++ P AP Q G P
Sbjct: 1211 GRSSTISVHDPFSDVSDSSFPKRNSMTPN-----APYQQGMSMP--------------DV 1251
Query: 376 SGPNPYARNRPPFGQGYTQPG 396
G PY N+ PFG PG
Sbjct: 1252 MGRMPYEPNKDPFGGMRKVPG 1272
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 54.3 bits (129), Expect = 2e-07
Identities = 79/304 (25%), Positives = 106/304 (34%), Gaps = 75/304 (24%)
Query: 126 PGEPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKNVMSAF 185
PG PGP+ GR + S D + Q+ + P + + ++
Sbjct: 445 PGTPGPTM---------GRSQGSPMDPMVMKRPQLYGMGSN---PHSQPQQSSPYPGGSY 492
Query: 186 GLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQ 245
G GP P + TP ++A +P Q Q PP G Q +G +
Sbjct: 493 G-----PPGPQRYPIGIQGRTPGAMAGMQ---YP---QQQMPPQYGQQGVSGYCQ----- 536
Query: 246 QYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQT-GPQQPQQFQGYGQQPTSQAPA--- 301
Q Q Y +QQPQ P PQ QY S SQQ PQQ +GYG + SQ P
Sbjct: 537 --QGQQPYYSQQPQPPHLPPQA---QYLPSQSQQRYQPQQDMSQEGYGTR--SQPPLAPG 589
Query: 302 ------------------PAFSGQPQQLPA--------------QPPQQYQASNYPAQTY 329
P SG LP Q SN PAQ+
Sbjct: 590 KPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSN-PAQSP 648
Query: 330 TAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGF---TSLPGSTMTPPPSGPNPYARNRP 386
+ + P ++ P S G+ Q R G S+PGS M P P G + + P
Sbjct: 649 FSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHP 708
Query: 387 PFGQ 390
Q
Sbjct: 709 ALSQ 712
Score = 46.6 bits (109), Expect = 4e-05
Identities = 77/302 (25%), Positives = 101/302 (33%), Gaps = 45/302 (14%)
Query: 122 SLEPPGEPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKNV 181
S PP P + G ++ +A GK AA+ A+ + + +
Sbjct: 386 SAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSP 445
Query: 182 MSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQP-PYTGAQTQAGQIE 240
+ G T + G P P + + S+ P QPQQ PY G G
Sbjct: 446 GTP-GPTMGRSQGSPMDPMVMKRPQLYGMGSN------PHSQPQQSSPYPGGSY--GPPG 496
Query: 241 GQMYQQYQQQAGYGAQQPQAPPQQ--PQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQ 298
Q Y Q GA PQQ P QYG Q + Y QQ QQP Y QQP
Sbjct: 497 PQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQG--QQPY----YSQQPQP- 549
Query: 299 APAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQP---------TNYTVAPASQPGM 349
P Q Q LP+Q Q+YQ +Q SQP + + +P
Sbjct: 550 ---PHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSS 606
Query: 350 APSQPGAYQPRP--------------GFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQP 395
P G+ P G TS G P S +P+A G P
Sbjct: 607 LPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSP 666
Query: 396 GP 397
P
Sbjct: 667 SP 668
Score = 42.0 bits (97), Expect = 0.001
Identities = 44/143 (30%), Positives = 53/143 (37%), Gaps = 21/143 (14%)
Query: 218 HPPGVQPQQPPYTGAQT-----QAGQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQY 272
H PG+ PQQP Y A + EG MY Y +QQ + QYG Y
Sbjct: 1290 HQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQ-----YSSQQQE----MYNQYGGSY 1340
Query: 273 SAS-----YSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQ 327
S Q P ++ QG GQ T P G Q ++ PQQ +
Sbjct: 1341 SGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDM 1400
Query: 328 TYTAQTSQ-PTNYTVAPASQPGM 349
Y Q Q P T AP PGM
Sbjct: 1401 PYPYQNRQGPGGPTQAP-PYPGM 1422
Score = 38.5 bits (88), Expect = 0.011
Identities = 52/201 (25%), Positives = 65/201 (32%), Gaps = 42/201 (20%)
Query: 233 QTQAGQIEGQMYQQYQQQ-----------AGYGAQQPQAPPQQPQQYGIQYSASYSQQTG 281
Q Q Q + Q QQ QQQ AG GA QP +QPQ G + SA+ Q
Sbjct: 56 QQQQQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADP 115
Query: 282 PQQP----------------------QQFQGYGQQPTSQAP--APAFSGQPQQLPAQPPQ 317
P P + G G T Q P P G P +P
Sbjct: 116 PGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEF--N 173
Query: 318 QYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGSTMTPPPSG 377
Y S PA + P PGM + PGS M P +
Sbjct: 174 NYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGM----MHSASAAAAGAPGS-MDPLQNS 228
Query: 378 PNPYARNRPPFGQGYTQPGPG 398
Y ++ GY++PG G
Sbjct: 229 HEGYPNSQCNHYPGYSRPGAG 249
Score = 36.2 bits (82), Expect = 0.054
Identities = 69/261 (26%), Positives = 93/261 (35%), Gaps = 47/261 (18%)
Query: 148 SASDSSGKQSTQVMAASMSAFDPLKNQDEINKNVMSAFGLTDDQVSGPPSAPAEDRS--- 204
SA+ S KQ Q + A ++ +E V S G T Q P +PA S
Sbjct: 1065 SAASSLKKQYIQYLFAFECK---IERGEEPPPEVFST-GDTKKQPKLQPPSPANSGSLQG 1120
Query: 205 -GTPDSIASSSSAAHPPGVQPQQPPYT--GAQT--QAGQIEG-QMYQQYQQQAGYG---- 254
TP S S+S A P ++P P T G T Q G+ ++ + +
Sbjct: 1121 PQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKR 1180
Query: 255 -AQQPQAPPQQ----PQQYG-IQYSASYSQQTG----PQQPQQFQGYGQQPTS------- 297
+ P AP QQ P G + Y + G P + F GQ P S
Sbjct: 1181 NSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYN 1240
Query: 298 QAPAPAFS----GQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQ 353
Q+P+ A S GQ QQ P + Y Q Y Q P+ QP Q
Sbjct: 1241 QSPSGAMSNLGMGQRQQFPYGASYDRRHEPY-GQQYPGQGP--------PSGQPPYGGHQ 1291
Query: 354 PGAYQPRPGFTSLPGSTMTPP 374
PG Y +P + PP
Sbjct: 1292 PGLYPQQPNYKRHMDGMYGPP 1312
Score = 36.2 bits (82), Expect = 0.054
Identities = 46/212 (21%), Positives = 71/212 (33%), Gaps = 29/212 (13%)
Query: 196 PSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGYGA 255
P + +R P I + G Q G Q M YQ + G G
Sbjct: 1353 PYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGG 1412
Query: 256 QQPQAPPQQ----------PQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFS 305
QAPP P Q I + + + +QP QP ++ P P++
Sbjct: 1413 PT-QAPPYPGMNRTDDMMVPDQR-INHESQWPSHVSQRQPYMSSSASMQPITRPPQPSY- 1469
Query: 306 GQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTS 365
Q P P + PA + ++ ++P+ P + + P +
Sbjct: 1470 ----QTPPSLPNHISRAPSPASFQRSLENR-----MSPSKSPFLPSMKMQKVMP-----T 1515
Query: 366 LPGSTMTPPPSGPNPYAR--NRPPFGQGYTQP 395
+P S +T PP P P R PP +QP
Sbjct: 1516 VPTSQVTGPPPQPPPIRREITFPPGSVEASQP 1547
Score = 35.4 bits (80), Expect = 0.092
Identities = 61/234 (26%), Positives = 79/234 (33%), Gaps = 69/234 (29%)
Query: 188 TDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGA-----QTQAGQIEGQ 242
T +Q+ PS G+ +S S+ PP Q GA Q AG G+
Sbjct: 360 TLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGK 419
Query: 243 -MYQQY---------QQQAGYGAQQPQAP----------------PQQPQQYGI------ 270
M QY QQ + A P P ++PQ YG+
Sbjct: 420 DMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHS 479
Query: 271 --QYSASY-SQQTGPQQPQQF----QG-------------------YGQQPTS----QAP 300
Q S+ Y GP PQ++ QG YGQQ S Q
Sbjct: 480 QPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQ 539
Query: 301 APAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQP 354
P +S QPQ P PPQ + Q Y Q + SQP +AP +P
Sbjct: 540 QPYYSQQPQP-PHLPPQAQYLPSQSQQRYQPQQDM-SQEGYGTRSQPPLAPGKP 591
Score = 31.6 bits (70), Expect = 1.3
Identities = 34/141 (24%), Positives = 47/141 (33%), Gaps = 24/141 (17%)
Query: 256 QQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQP 315
+QP+ P P G Q TG + G + PT PA + Q P Q
Sbjct: 1103 KQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPT-----PASTPHGQMTPMQG 1157
Query: 316 PQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGSTMTPPP 375
+ S + + + +S P ++ P AP Q G P
Sbjct: 1158 GRSSTISVHDPFSDVSDSSFPKRNSMTPN-----APYQQGMSMP--------------DV 1198
Query: 376 SGPNPYARNRPPFGQGYTQPG 396
G PY N+ PFG PG
Sbjct: 1199 MGRMPYEPNKDPFGGMRKVPG 1219
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 53.9 bits (128), Expect = 2e-07
Identities = 67/274 (24%), Positives = 96/274 (35%), Gaps = 47/274 (17%)
Query: 129 PGPSTNIP-ENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKNVMSAFGL 187
PG + P E++T R K A ++ G Q A + P + +D K
Sbjct: 27 PGHPSQPPLEDNTPATRTTKGAREAGG----QAQAMELPEAQPRQARDGELK-------- 74
Query: 188 TDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQY 247
PPS + S TP S + PPG P Q P AG+ EG Q+Y
Sbjct: 75 -------PPSLRGQAPSSTPGKRGSPQT---PPGRSPLQAP----SRLAGRAEGSPPQRY 120
Query: 248 QQQAGYGAQQP--QAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFS 305
+P P+ PQ +A + PQ P G G P
Sbjct: 121 ILGIASSRTKPTLDETPENPQLE----AAQLPEVDTPQGP----GTGAPLRPGLPRTEAQ 172
Query: 306 GQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQ------- 358
++L Q S++ + YT+ ++ P P G +P QPG+Y
Sbjct: 173 PAAEELGFHRCFQEPPSSFTSTNYTSPSATPRPPAPGPPQSRGTSPLQPGSYPEYQASGA 232
Query: 359 ---PRPGFTSLPGSTMTPPPSGPNPYARNRPPFG 389
P S PG+ PP+ P P + P G
Sbjct: 233 DSWPPAAENSFPGANFGVPPAEPEPIPKGSRPGG 266
Score = 38.1 bits (87), Expect = 0.014
Identities = 74/314 (23%), Positives = 113/314 (35%), Gaps = 57/314 (18%)
Query: 126 PGEPGPSTN--IPENDTVDGREEKSASDSSGKQSTQVMAASMSA-------------FDP 170
PG PGP +P ++ R D+ GK++ V + A D
Sbjct: 3556 PGSPGPLLQQALPLGASLP-RPGARGQDAEGKRAPLVFSGKRRAPGARGRCAPDHFQEDH 3614
Query: 171 L--KNQDEINKNVMSAFGLTDDQVSGPPSAPAEDRSGTPD-SIASSSSAAHPPGVQPQQP 227
L K ++ + +++S G G + PA +S + D S AS+ S A V P++
Sbjct: 3615 LLQKEKEVSSSHMVSEGGPRGTFHKGSATKPAGCQSSSKDRSAASTPSKALKFPVHPRKA 3674
Query: 228 PYTGAQTQAGQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQ 287
G+ G + G P+A P P G ++ G QPQ
Sbjct: 3675 --VGSLAPGELARGT-------ENGMKPATPKAKPG-PSSQGSGSPRPGTKTGGGSQPQP 3724
Query: 288 FQGYGQQPTSQAPA----PAFSGQPQQLPAQP-------------PQQYQASNYPAQTYT 330
G Q T+ PA P+ S P++LPA+ Q S P +
Sbjct: 3725 ASGQLQSETATTPAKPSFPSRSPAPERLPARAQAKSCTKGPREAGEQGPHGSLGPKEKGE 3784
Query: 331 AQTSQPTNYTVAPASQP-----GMAPSQPGAYQPRPGFTSLPGSTMTPPPSGPNPYARNR 385
+ T + PA G APS P P + P + P+ P P ++N+
Sbjct: 3785 SSTKRKKGQVPGPARSESVGSFGRAPSAPDKPPRTPRKQATPSRVL---PTKPKPNSQNK 3841
Query: 386 ---PPFGQGYTQPG 396
PP Q +PG
Sbjct: 3842 PRPPPSEQRKAEPG 3855
Score = 33.5 bits (75), Expect = 0.35
Identities = 51/212 (24%), Positives = 80/212 (37%), Gaps = 48/212 (22%)
Query: 223 QPQQPPYTGAQTQAGQIEGQMYQQYQQQAGYGAQQPQAPPQQP-QQYGIQYSASYSQQTG 281
+ +QPP G + + G+ ++ + G +PQ P + Q+ G + + ++ G
Sbjct: 1072 EDEQPPPRGPGFRGRRGRGEKRKEVELTQGPREDEPQKPRKAARQEAGGDGAPANPEEPG 1131
Query: 282 PQQPQQFQGYGQQPTSQAPA-------------PAFSGQPQQLPAQP---PQQYQAS--- 322
+P G G+ P ++ P+ P + +P P P P + S
Sbjct: 1132 GSRP----GPGRSPQARGPSRSLETGAAAREGGPKCADRPSVAPKDPLQVPTNTETSEET 1187
Query: 323 ----NYPAQT---YTAQTSQP--TNYTVAPASQPGMAPSQPGA-------YQPRPGFTSL 366
++P + TA+ S P T +T A S P + GA QP P
Sbjct: 1188 RPSLDFPQEAKEPETAEESAPDSTEFTEALRSPPAACAGEMGASPGLLIPEQPPPS---- 1243
Query: 367 PGSTMTPPPSGPNPYARNRPPFGQGYTQPGPG 398
T TP PSG N P G T PG G
Sbjct: 1244 RHDTGTPKPSGS---LANTAPHGSSPT-PGVG 1271
>gi|73695473 roquin [Homo sapiens]
Length = 1133
Score = 53.9 bits (128), Expect = 2e-07
Identities = 74/323 (22%), Positives = 109/323 (33%), Gaps = 55/323 (17%)
Query: 98 ESSQVKYLRRELIELRNKVNRLLDSLEPPGEPGPSTNIPENDTVDGREEKSASDSSGKQS 157
E + + + + L+ R ++ L L G P + +P+ VD K + +G S
Sbjct: 442 ELEKFRKMNKRLVP-RRPLSASLGQLNEVGLPSAAI-LPDEGAVDLPSRKPPALPNGIVS 499
Query: 158 TQVMAASMSAFDPLKNQDEINKNVMSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAA 217
T +++ P + ++ G D S P +P + P SI++
Sbjct: 500 T---GNTVTQLIPRGTDPSYDSSLKP--GKIDHLSSSAPGSPPDLLESVPKSISALPVNP 554
Query: 218 H--PPGVQPQQPPYTGAQTQAGQIEG-QMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSA 274
H PP PP + G Q+Y Q Y + APP +P A
Sbjct: 555 HSIPPRGPADLPPMPVTKPLQMVPRGSQLYPAQQTDVYYQDPRGAAPPFEP--------A 606
Query: 275 SYSQQTGPQQPQQFQGYGQQPTSQAPAPA-------------------FSGQPQQLPAQP 315
Y Q P Q +P AP PA + QPQQ P
Sbjct: 607 PYQQGMYYTPPPQCVSRFVRPPPSAPEPAPPYLDHYPPYLQERVVNSQYGTQPQQYPPIY 666
Query: 316 PQQYQASN-YPAQTYTAQT---SQPTNYTVAPASQPGMAPSQPGAYQP------------ 359
P Y YPA +YT + P + PA+ P P YQ
Sbjct: 667 PSHYDGRRVYPAPSYTREEIFRESPIPIEIPPAAVPSYVPESRERYQQIESYYPVAPHPT 726
Query: 360 --RPGFTSLPGSTMTPPPSGPNP 380
RP + P + PPP P+P
Sbjct: 727 QIRPSYLREPPYSRLPPPPQPHP 749
>gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens]
Length = 2382
Score = 52.8 bits (125), Expect = 6e-07
Identities = 71/265 (26%), Positives = 94/265 (35%), Gaps = 35/265 (13%)
Query: 129 PGPSTNIPENDT----VDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKNVMSA 184
P ST IP T V + E ++ Q Q S+S +V +
Sbjct: 607 PSASTGIPTASTTSASVSTQVEPEEPEADQHQQLQYQQPSISVLSDGTVDSGQGSSVFTE 666
Query: 185 FGLTDDQVS--GPPSAPAEDRSGTPDSIASSSSA-AHPPGVQP-------QQPPYTGAQT 234
++ Q G A P I S+ A + P GV P Q + +
Sbjct: 667 SRVSSQQTVSYGSQHEQAHSTGTVPGHIPSTVQAQSQPHGVYPPSSVAQGQSQGQPSSSS 726
Query: 235 QAGQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQT------GPQQPQ-- 286
G Q Q QQQ G Q APPQQ QY + +++ S+ T PQ PQ
Sbjct: 727 LTGVSSSQPIQHPQQQQGI---QQTAPPQQTVQYSLSQTSTSSEATTAQPVSQPQAPQVL 783
Query: 287 -QFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQT--YTAQTSQPTNYTVAP 343
Q Q P SQ P P G+P Q P Q S P + + QP + P
Sbjct: 784 PQVSAGKQLPVSQ-PVPTIQGEP-----QIPVATQPSVVPVHSGAHFLPVGQPLPTPLLP 837
Query: 344 ASQPGMAP-SQPGAYQPRPGFTSLP 367
P S P + GF+SLP
Sbjct: 838 QYPVSQIPISTPHVSTAQTGFSSLP 862
Score = 43.9 bits (102), Expect = 3e-04
Identities = 65/262 (24%), Positives = 91/262 (34%), Gaps = 65/262 (24%)
Query: 144 REEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKNVMSAFGLTDDQVSGPPSAPAEDR 203
+E+K +SS KQ + +AS + L PSA
Sbjct: 579 QEKKKQEESSLKQQVEQSSASQTGIKQL------------------------PSAS---- 610
Query: 204 SGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQ--------QQAGYGA 255
+G P AS++SA+ V+P++P +A Q + YQQ +G G+
Sbjct: 611 TGIPT--ASTTSASVSTQVEPEEP-------EADQHQQLQYQQPSISVLSDGTVDSGQGS 661
Query: 256 Q---QPQAPPQQPQQYGIQYSASYSQQTGPQQ-----PQQFQGYGQQPTSQAPAPAFSGQ 307
+ + QQ YG Q+ ++S T P Q Q +G P S GQ
Sbjct: 662 SVFTESRVSSQQTVSYGSQHEQAHSTGTVPGHIPSTVQAQSQPHGVYPPSSVAQGQSQGQ 721
Query: 308 PQQL---------PAQPPQQYQASNY---PAQTYTAQTSQPTNYTVAPASQPGMAPSQPG 355
P P Q PQQ Q P QT SQ + + A +QP P P
Sbjct: 722 PSSSSLTGVSSSQPIQHPQQQQGIQQTAPPQQTVQYSLSQTSTSSEATTAQPVSQPQAPQ 781
Query: 356 AYQPRPGFTSLPGSTMTPPPSG 377
LP S P G
Sbjct: 782 VLPQVSAGKQLPVSQPVPTIQG 803
Score = 31.6 bits (70), Expect = 1.3
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 9/62 (14%)
Query: 298 QAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAY 357
QA P + Q+P+ PP +N PA T SQP QP + P+QP +
Sbjct: 1584 QAAGPTSTPLLPQVPSIPPLVQPVANVPAVQQTLIHSQP---------QPALLPNQPHTH 1634
Query: 358 QP 359
P
Sbjct: 1635 CP 1636
>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform a [Homo sapiens]
Length = 1590
Score = 52.8 bits (125), Expect = 6e-07
Identities = 64/219 (29%), Positives = 74/219 (33%), Gaps = 26/219 (11%)
Query: 194 GPPSAPAEDRS-----------GTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQ-IEG 241
GPP +P + S G P+ ++S S P PQ PP +Q G I G
Sbjct: 107 GPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPMSGGGP--TPPQMPP-----SQPGALIPG 159
Query: 242 QMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQ-QFQGYGQQPTSQAP 300
Q G P Q Q + Y Q P+ Q QG P Q
Sbjct: 160 DPQAMSQPNRGPSPFSPVQLHQLRAQI-LAYKMLARGQPLPETLQLAVQGKRTLPGLQQQ 218
Query: 301 APAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPR 360
Q QQ Q QQ Q P Q T Q QP S PG S P Q
Sbjct: 219 QQQQQQQQQQQQQQQQQQQQPQQQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTPQKL 278
Query: 361 PGFTSLPGSTMTP-PPSGPNPYARNRPPFGQGYTQPGPG 398
P PG +P PP+ P A P G QP PG
Sbjct: 279 P--VPAPGGRPSPAPPAAAQPPAAAVP--GPSVPQPAPG 313
>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform b [Homo sapiens]
Length = 1572
Score = 52.8 bits (125), Expect = 6e-07
Identities = 64/219 (29%), Positives = 74/219 (33%), Gaps = 26/219 (11%)
Query: 194 GPPSAPAEDRS-----------GTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQ-IEG 241
GPP +P + S G P+ ++S S P PQ PP +Q G I G
Sbjct: 107 GPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPMSGGGP--TPPQMPP-----SQPGALIPG 159
Query: 242 QMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQ-QFQGYGQQPTSQAP 300
Q G P Q Q + Y Q P+ Q QG P Q
Sbjct: 160 DPQAMSQPNRGPSPFSPVQLHQLRAQI-LAYKMLARGQPLPETLQLAVQGKRTLPGLQQQ 218
Query: 301 APAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPR 360
Q QQ Q QQ Q P Q T Q QP S PG S P Q
Sbjct: 219 QQQQQQQQQQQQQQQQQQQQPQQQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTPQKL 278
Query: 361 PGFTSLPGSTMTP-PPSGPNPYARNRPPFGQGYTQPGPG 398
P PG +P PP+ P A P G QP PG
Sbjct: 279 P--VPAPGGRPSPAPPAAAQPPAAAVP--GPSVPQPAPG 313
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.129 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,364,689
Number of Sequences: 37866
Number of extensions: 1274548
Number of successful extensions: 13178
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 247
Number of HSP's successfully gapped in prelim test: 1076
Number of HSP's that attempted gapping in prelim test: 7138
Number of HSP's gapped (non-prelim): 4443
length of query: 400
length of database: 18,247,518
effective HSP length: 104
effective length of query: 296
effective length of database: 14,309,454
effective search space: 4235598384
effective search space used: 4235598384
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.