Guide to the Human Genome
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Name: RBM14 Sequence: fasta or formatted (669aa) NCBI GI: 5454064
Description:

RNA binding motif protein 14

Referenced in:

RNA-binding Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            19.6        131           4
 C cysteine            0.4          3           1
 D aspartate           2.8         19           2
 E glutamate           2.4         16           2
 F phenylalanine       2.2         15           2
 G glycine             9.1         61           2
 H histidine           1.0          7           1
 I isoleucine          0.9          6           1
 K lysine              2.8         19           2
 L leucine             5.5         37           1
 M methionine          1.9         13           1
 N asparagine          2.5         17           1
 P proline             6.7         45           3
 Q glutamine           7.5         50           2
 R arginine            6.1         41           2
 S serine             13.2         88           2
 T threonine           4.0         27           2
 V valine              3.9         26           2
 W tryptophan          0.1          1           1
 Y tyrosine            7.0         47           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RNA binding motif protein 14 
RBM4B                 0.092   RNA binding motif protein 4B 
RBM4                  0.089   RNA binding motif protein 4 
DAZAP1                0.046   DAZ associated protein 1 isoform b 
EWSR1                 0.041   Ewing sarcoma breakpoint region 1 isoform 4 
FUS                   0.039   fusion (involved in t(12;16) in malignant liposarcoma...
EWSR1                 0.039   Ewing sarcoma breakpoint region 1 isoform 1 
EWSR1                 0.038   Ewing sarcoma breakpoint region 1 isoform 5 
EWSR1                 0.038   Ewing sarcoma breakpoint region 1 isoform 3 
EWSR1                 0.038   Ewing sarcoma breakpoint region 1 isoform 2 
DAZAP1                0.037   DAZ associated protein 1 isoform a 
RBMXL1                0.036   RNA binding motif protein, X-linked-like 1 
RBMXL1                0.036   RNA binding motif protein, X-linked-like 1 
MSI1                  0.036   musashi 1 
RBMX                  0.034   RNA binding motif protein, X-linked 
RBMXL2                0.033   testes-specific heterogenous nuclear ribonucleoprot...
RALYL                 0.031   RALY RNA binding protein-like isoform 2 
RALYL                 0.031   RALY RNA binding protein-like isoform 2 
RALYL                 0.031   RALY RNA binding protein-like isoform 2 
RALYL                 0.031   RALY RNA binding protein-like isoform 1 
HRNR                  0.030   hornerin 
PABPC4                0.030   poly A binding protein, cytoplasmic 4 isoform 3 [Ho...
PABPC4                0.030   poly A binding protein, cytoplasmic 4 isoform 2 [Homo...
PABPC4                0.030   poly A binding protein, cytoplasmic 4 isoform 1 [Ho...
TIAL1                 0.029   TIA-1 related protein isoform 1 
LOC100133915          0.029   PREDICTED: hypothetical protein 
PABPC1L               0.029   poly(A)-binding protein, cytoplasmic 1-like 
ARID1A                0.029   AT rich interactive domain 1A isoform a 
ARID1A                0.029   AT rich interactive domain 1A isoform b 
TIA1                  0.028   TIA1 protein isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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