Search of human proteins with 134142824

Search of human proteins with 134142824

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|134142824 forkhead box D2 [Homo sapiens]
         (495 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134142824 forkhead box D2 [Homo sapiens]                          1030   0.0  
gi|4758392 forkhead box D1 [Homo sapiens]                             321   1e-87
gi|6912372 forkhead box D3 [Homo sapiens]                             284   1e-76
gi|18959276 forkhead box D4-like 1 [Homo sapiens]                     228   7e-60
gi|146262007 forkhead box D4-like 6 [Homo sapiens]                    224   1e-58
gi|187423902 forkhead box D4-like 5 [Homo sapiens]                    223   2e-58
gi|149944560 forkhead box D4-like 2 [Homo sapiens]                    223   3e-58
gi|76880472 forkhead box D4-like 4 [Homo sapiens]                     223   3e-58
gi|157042770 forkhead box D4-like 3 [Homo sapiens]                    222   5e-58
gi|21618325 forkhead box E1 [Homo sapiens]                            213   2e-55
gi|75677594 forkhead box D4 [Homo sapiens]                            213   2e-55
gi|11386197 forkhead box E3 [Homo sapiens]                            209   6e-54
gi|119395716 forkhead box C1 [Homo sapiens]                           190   2e-48
gi|12751477 forkhead box L2 [Homo sapiens]                            184   2e-46
gi|4557595 forkhead box F2 [Homo sapiens]                             181   1e-45
gi|24497501 forkhead box A1 [Homo sapiens]                            174   1e-43
gi|145309320 forkhead box Q1 [Homo sapiens]                           172   5e-43
gi|61966923 forkhead box B2 [Homo sapiens]                            170   2e-42
gi|28973785 forkhead box S1 [Homo sapiens]                            166   3e-41
gi|4885237 forkhead box C2 [Homo sapiens]                             166   5e-41
gi|105554437 forkhead box B1 [Homo sapiens]                           160   2e-39
gi|195947376 forkhead box I2 [Homo sapiens]                           159   4e-39
gi|24497506 forkhead box A3 [Homo sapiens]                            159   7e-39
gi|24497504 forkhead box A2 isoform 2 [Homo sapiens]                  157   2e-38
gi|194394143 forkhead box A2 isoform 1 [Homo sapiens]                 157   2e-38
gi|22779860 forkhead box L1 [Homo sapiens]                            157   2e-38
gi|110735445 forkhead box F1 [Homo sapiens]                           153   4e-37
gi|208431824 forkhead box I3 [Homo sapiens]                           150   3e-36
gi|32307177 forkhead box G1 [Homo sapiens]                            148   1e-35
gi|21618327 forkhead box I1 isoform a [Homo sapiens]                  144   2e-34

>gi|134142824 forkhead box D2 [Homo sapiens]
          Length = 495

 Score = 1030 bits (2662), Expect = 0.0
 Identities = 495/495 (100%), Positives = 495/495 (100%)

Query: 1   MTLGSCCCEIMSSESSPAALSEADADIDVVGGGSGGGELPARSGPRAPRDVLPHGHEPPA 60
           MTLGSCCCEIMSSESSPAALSEADADIDVVGGGSGGGELPARSGPRAPRDVLPHGHEPPA
Sbjct: 1   MTLGSCCCEIMSSESSPAALSEADADIDVVGGGSGGGELPARSGPRAPRDVLPHGHEPPA 60

Query: 61  EEAEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPGPGPPSGGAA 120
           EEAEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPGPGPPSGGAA
Sbjct: 61  EEAEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPGPGPPSGGAA 120

Query: 121 TRSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLS 180
           TRSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLS
Sbjct: 121 TRSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLS 180

Query: 181 LNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLPPPHPHPHPHPE 240
           LNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLPPPHPHPHPHPE
Sbjct: 181 LNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLPPPHPHPHPHPE 240

Query: 241 LLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPPPGPAPHPHPHPHAFAFAAA 300
           LLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPPPGPAPHPHPHPHAFAFAAA
Sbjct: 241 LLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPPPGPAPHPHPHPHAFAFAAA 300

Query: 301 AAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAPAPAPASGSGPGPGPAGLPAFLGAEL 360
           AAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAPAPAPASGSGPGPGPAGLPAFLGAEL
Sbjct: 301 AAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAPAPAPASGSGPGPGPAGLPAFLGAEL 360

Query: 361 GCAKAFYAASLSPPAAGTAAGLPTALLRQGLKTDAGGGAGGGGAGAGQRPSFSIDHIMGH 420
           GCAKAFYAASLSPPAAGTAAGLPTALLRQGLKTDAGGGAGGGGAGAGQRPSFSIDHIMGH
Sbjct: 361 GCAKAFYAASLSPPAAGTAAGLPTALLRQGLKTDAGGGAGGGGAGAGQRPSFSIDHIMGH 420

Query: 421 GGGGAAPPGAGEGSPGPPFAAAAGPGGQAQVLAMLTAPALAPVAGHIRLSHPGDALLSSG 480
           GGGGAAPPGAGEGSPGPPFAAAAGPGGQAQVLAMLTAPALAPVAGHIRLSHPGDALLSSG
Sbjct: 421 GGGGAAPPGAGEGSPGPPFAAAAGPGGQAQVLAMLTAPALAPVAGHIRLSHPGDALLSSG 480

Query: 481 SRFASKVAGLSGCHF 495
           SRFASKVAGLSGCHF
Sbjct: 481 SRFASKVAGLSGCHF 495


>gi|4758392 forkhead box D1 [Homo sapiens]
          Length = 465

 Score =  321 bits (822), Expect = 1e-87
 Identities = 224/508 (44%), Positives = 254/508 (50%), Gaps = 77/508 (15%)

Query: 11  MSSESSPAALSEADADIDVVGGGS------------GGGELPARSGPRAPRDVLPHGHEP 58
           +S+E S A+    + DIDVVG G             GGG  P  + P   R         
Sbjct: 3   LSTEMSDASGLAEETDIDVVGEGEDEEDEEEEDDDEGGGGGPRLAVPAQRR----RRRRS 58

Query: 59  PAEEAEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPGPGPPSGG 118
            A E E +  E+EE+     D +       G + A   P P A A  G  G G G   GG
Sbjct: 59  YAGEDELEDLEEEED-----DDDILLAPPAGGSPAPPGPAPAAGAGAGGGGGGGGAGGGG 113

Query: 119 AA---TRSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSI 175
           +A    ++PLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSI
Sbjct: 114 SAGSGAKNPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSI 173

Query: 176 RHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLPPPHPHP 235
           RHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPL P  P+ 
Sbjct: 174 RHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLLP--PNA 231

Query: 236 HPHPELLLRGGAAA--AGDPGAFL----------PGFAAYGAYGYGYGLALPAYGAPPPG 283
                LLLRG  AA  AGDP A            P    YG YG GYGL LP Y APP  
Sbjct: 232 AAAESLLLRGAGAAGGAGDPAAAAALFPPAPPPPPHAYGYGPYGCGYGLQLPPY-APPS- 289

Query: 284 PAPHPHPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAPAPAPASGS 343
                       A  AAAAAA    +  P     PPP    A+  A       P P   +
Sbjct: 290 ------------ALFAAAAAAAAAAAFHPHSPPPPPPPHGAAAELARTAFGYRPHPLGAA 337

Query: 344 GPGPGPAGLPAFLGAELGCAKAFYAASLSPPAAGTAAGLPTALLRQGLKTDAGGGAGGGG 403
            PGP PA                 AA    P A   A  P +     +++  GG  G   
Sbjct: 338 LPGPLPAS----------------AAKAGGPGASALARSPFS-----IESIIGGSLGPAA 376

Query: 404 AGAGQRPSFSIDHIMGHGGGGAAPPGAGEGSPGPPFAAAAGPGGQ-AQVLAMLTAPALAP 462
           A A    + +           AAPP  G    G    AA GP     + L    A A + 
Sbjct: 377 AAAAAAQAAAAAQASPSPSPVAAPPAPGSSGGGCAAQAAVGPAAALTRSLVAAAAAAASS 436

Query: 463 VAGHIRLS--HPGDALLSSGSRFASKVA 488
           V+    L   H G A LSS   F ++++
Sbjct: 437 VSSSAALGTLHQGTA-LSSVENFTARIS 463


>gi|6912372 forkhead box D3 [Homo sapiens]
          Length = 478

 Score =  284 bits (726), Expect = 1e-76
 Identities = 203/461 (44%), Positives = 234/461 (50%), Gaps = 78/461 (16%)

Query: 12  SSESSPAALSEADADIDVVGGGSGGGE-------LPARSGPRAPR----DVLP-----HG 55
           S  S    L+  D DIDVVG G  G E         + +GP   R    D +P     HG
Sbjct: 10  SDMSGQTVLTAEDVDIDVVGEGDDGLEEKDSDAGCDSPAGPPELRLDEADEVPPAAPHHG 69

Query: 56  HEPPAEEAEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPGPGPP 115
              P  +    L ++   +G    G+       GA  A G  G       GA+G GPG  
Sbjct: 70  QPQPPHQQPLTLPKEAAGAGAGPGGDV------GAPEADGCKGGVGGEEGGASGGGPGAG 123

Query: 116 SGGAATRSP------LVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFP 169
           SG A   +P      LVKPPYSYIALITMAILQSP+K+LTLS ICEFIS RFPYYREKFP
Sbjct: 124 SGSAGGLAPSKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFP 183

Query: 170 AWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLP 229
           AWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDP+S DMFDNGSFLRRRKRFKR    
Sbjct: 184 AWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKR---- 239

Query: 230 PPHPHPHPHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPPPGPAPHPH 289
             H   H   +  L   +  A    A      A G YG  YGL         P  A   +
Sbjct: 240 --HQQEHLREQTALMMQSFGAYSLAA---AAGAAGPYGRPYGL--------HPAAAAGAY 286

Query: 290 PHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAPAPAPASGSGPGPGP 349
            HP A A AAAAAA     ++PP     PP  P   S     G     A A GS  GPG 
Sbjct: 287 SHPAAAAAAAAAAALQYPYALPPVAPVLPPAVPLLPS-----GELGRKAAAFGSQLGPG- 340

Query: 350 AGLPAFLGAELGCAKAFYAASLSPPAAGTAAGLPTALLRQGLKTDAGGGAGGGGAGAGQR 409
                 L  +L    A  AA+ +  AAGT A L        +K++              R
Sbjct: 341 ------LQLQLNSLGAAAAAAGTAGAAGTTASL--------IKSEPSA-----------R 375

Query: 410 PSFSIDHIMGHGGGGAAPPGAGEGSPGPPFAAAAGPGGQAQ 450
           PSFSI++I+  GGG AAP G+  G+        +G G  AQ
Sbjct: 376 PSFSIENII--GGGPAAPGGSAVGAGVAGGTGGSGGGSTAQ 414



 Score = 29.6 bits (65), Expect = 6.6
 Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 6/70 (8%)

Query: 89  GAAAAAGSPGPGAAAARGAAGPGPGPPSGGAATRSPLVKPPYSYIALITMAILQSPKKRL 148
           G  AA G    GA  A G  G      SGG +T    ++PP +  +   MA  Q      
Sbjct: 386 GGPAAPGGSAVGAGVAGGTGG------SGGGSTAQSFLRPPGTVQSAALMATHQPLSLSR 439

Query: 149 TLSEICEFIS 158
           T + I   +S
Sbjct: 440 TTATIAPILS 449


>gi|18959276 forkhead box D4-like 1 [Homo sapiens]
          Length = 408

 Score =  228 bits (582), Expect = 7e-60
 Identities = 178/441 (40%), Positives = 205/441 (46%), Gaps = 68/441 (15%)

Query: 39  LPARSGPRA-PRDVLPHGHEPPAEEAEADLAEDEEESGGCSDGEPRALASRGAAAAAGSP 97
           LP    PR+ P+  L    +   E+ + D+  +EE+     D E  A  S+     +  P
Sbjct: 3   LPRAERPRSTPQRSL---RDSDGEDGKIDVLGEEEDEDEVEDEEEEA--SQKFLEQSLQP 57

Query: 98  GPGAAAARGAA-------GPGPGPPSG-GAATRSPL------------VKPPYSYIALIT 137
           G   A   G A       G GP  PS  G   R+P              KPPYSYIALIT
Sbjct: 58  GLQVARWGGVALPREHIEGGGPSDPSEFGTEFRAPPRSAAASEDARQPAKPPYSYIALIT 117

Query: 138 MAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGK 197
           MAILQSP KRLTLS IC FISGRFPYYR KFPAWQNSIRHNLSLNDCFVKIPREPG+PGK
Sbjct: 118 MAILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGK 177

Query: 198 GNYWTLDPESADMFDNGSFLRRRKRFKRQPLPPPHPHPHPHPELLLRGGAAAAGDPGAFL 257
           G YW+LDP S DMFDNGSFLRRRKRFKR  L P    PHP P   L    AA  +P    
Sbjct: 178 GTYWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFP---LPAAHAALHNPRP-- 232

Query: 258 PGFAAYGAYGYGYGLALPAYGAPPPGPAPHPHPHPHAFAFAAAAAAAPCQLSVPPGRAAA 317
                      G  L  PA   P PG  P+  P    +A           LS P   A A
Sbjct: 233 -----------GPLLGAPALPQPVPGAYPNTAPGRRPYALLHPHPPRYLLLSAP---AYA 278

Query: 318 PPPGPPTASVFAGAGSAPAPAPASGSGPGPGPAGLPAFLGAELGCAKAFYAASLSPPAAG 377
             P     +  A  G+ P   P+ G  P     GL +  G   GC  +F   S+     G
Sbjct: 279 GAPKKAEGADLATPGTLPVLQPSLGPQPWEEGKGLASPPGG--GCI-SFSIESIMQGVRG 335

Query: 378 TAAGL-----PTA-----LLRQGLKTDAGGGAGGGGAGAGQRPSFSIDHIMGHGGGGAAP 427
              G      PTA     LL++         A    +G G R       +  H G     
Sbjct: 336 AGTGAAQSLSPTAWSYCPLLQRPSSLSDNFAATAAASGGGLR-----QRLRSHQG----- 385

Query: 428 PGAGEGSPGPPFAAAAGPGGQ 448
            GAG    G   AAA   GG+
Sbjct: 386 RGAGRAPVGRVGAAAVSGGGR 406


>gi|146262007 forkhead box D4-like 6 [Homo sapiens]
          Length = 417

 Score =  224 bits (572), Expect = 1e-58
 Identities = 142/288 (49%), Positives = 153/288 (53%), Gaps = 48/288 (16%)

Query: 61  EEAEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPGPG------- 113
           EE + D  EDEEE+      E         A   G   P      G     P        
Sbjct: 32  EEEDEDEVEDEEEAASQQFLEQSLQPGLQVARWGGVALPREHIEGGGGPSDPSEFGTKFR 91

Query: 114 -PPSGGAAT---RSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFP 169
            PP   AA+   R P  KPPYSYIALITMAILQ+P KRLTLS IC FISGRFPYYR KFP
Sbjct: 92  APPRSAAASEDARQP-AKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFP 150

Query: 170 AWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLP 229
           AWQNSIRHNLSLNDCFVKIPREPG+PGKGNYW+LDP S DMFDNGSFLRRRKRFKR  L 
Sbjct: 151 AWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLT 210

Query: 230 P----PHPHP---------HPHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPA 276
           P    PHP P         +PHP  LL  GA A   P   +PG                A
Sbjct: 211 PGAHLPHPFPLPAAHAALHNPHPGPLL--GAPAPPQP---VPG----------------A 249

Query: 277 YGAPPPGPAPHP--HPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGP 322
           Y    PG  P+   HPHP  +   +A   A           A P P P
Sbjct: 250 YPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKAEGAALATPAPFP 297


>gi|187423902 forkhead box D4-like 5 [Homo sapiens]
          Length = 416

 Score =  223 bits (569), Expect = 2e-58
 Identities = 142/288 (49%), Positives = 152/288 (52%), Gaps = 48/288 (16%)

Query: 61  EEAEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPGPG------- 113
           EE + D  EDEEE       E         A   G   P      G     P        
Sbjct: 32  EEEDEDEVEDEEEEARQQFLEQSLQPGLQVARWGGVALPREHIEGGGGPSDPSEFGTKFR 91

Query: 114 -PPSGGAAT---RSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFP 169
            PP   AA+   R P  KPPYSYIALITMAILQ+P KRLTLS IC FISGRFPYYR KFP
Sbjct: 92  APPRSAAASEDARQP-AKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFP 150

Query: 170 AWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLP 229
           AWQNSIRHNLSLNDCFVKIPREPG+PGKGNYW+LDP S DMFDNGSFLRRRKRFKR  L 
Sbjct: 151 AWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLT 210

Query: 230 P----PHPHP---------HPHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPA 276
           P    PHP P         +PHP  LL  GA A   P   +PG                A
Sbjct: 211 PGAHLPHPFPLPAAHAALHNPHPGPLL--GAPAPPQP---VPG----------------A 249

Query: 277 YGAPPPGPAPHP--HPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGP 322
           Y    PG  P+   HPHP  +   +A   A           A P P P
Sbjct: 250 YPNTAPGRCPYALLHPHPLRYLLLSAPVYAGAPKKAEGADLATPAPFP 297


>gi|149944560 forkhead box D4-like 2 [Homo sapiens]
          Length = 416

 Score =  223 bits (568), Expect = 3e-58
 Identities = 142/288 (49%), Positives = 152/288 (52%), Gaps = 48/288 (16%)

Query: 61  EEAEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPGPG------- 113
           EE + D  EDEEE       E         A   G   P      G     P        
Sbjct: 32  EEEDEDEVEDEEEEARQQFLEQSLQPGLQVARWGGVALPREHIEGGGGPSDPSEFGTKFR 91

Query: 114 -PPSGGAAT---RSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFP 169
            PP   AA+   R P  KPPYSYIALITMAILQ+P KRLTLS IC FISGRFPYYR KFP
Sbjct: 92  APPRSAAASEDARQP-AKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFP 150

Query: 170 AWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLP 229
           AWQNSIRHNLSLNDCFVKIPREPG+PGKGNYW+LDP S DMFDNGSFLRRRKRFKR  L 
Sbjct: 151 AWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLT 210

Query: 230 P----PHPHP---------HPHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPA 276
           P    PHP P         +PHP  LL  GA A   P   +PG                A
Sbjct: 211 PGAHLPHPFPLPAAHAALHNPHPGPLL--GAPAPPQP---VPG----------------A 249

Query: 277 YGAPPPGPAPHP--HPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGP 322
           Y    PG  P+   HPHP  +   +A   A           A P P P
Sbjct: 250 YPNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFP 297


>gi|76880472 forkhead box D4-like 4 [Homo sapiens]
          Length = 416

 Score =  223 bits (568), Expect = 3e-58
 Identities = 142/288 (49%), Positives = 152/288 (52%), Gaps = 48/288 (16%)

Query: 61  EEAEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPGPG------- 113
           EE + D  EDEEE       E         A   G   P      G     P        
Sbjct: 32  EEEDEDEVEDEEEEARQQFLEQSLQPGLQVARWGGVALPREHIEGGGGPSDPSEFGTKFR 91

Query: 114 -PPSGGAAT---RSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFP 169
            PP   AA+   R P  KPPYSYIALITMAILQ+P KRLTLS IC FISGRFPYYR KFP
Sbjct: 92  APPRSAAASEDARQP-AKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFP 150

Query: 170 AWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLP 229
           AWQNSIRHNLSLNDCFVKIPREPG+PGKGNYW+LDP S DMFDNGSFLRRRKRFKR  L 
Sbjct: 151 AWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLT 210

Query: 230 P----PHPHP---------HPHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPA 276
           P    PHP P         +PHP  LL  GA A   P   +PG                A
Sbjct: 211 PGAHLPHPFPLPAAHAALHNPHPGPLL--GAPAPPQP---VPG----------------A 249

Query: 277 YGAPPPGPAPHP--HPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGP 322
           Y    PG  P+   HPHP  +   +A   A           A P P P
Sbjct: 250 YPNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFP 297


>gi|157042770 forkhead box D4-like 3 [Homo sapiens]
          Length = 417

 Score =  222 bits (566), Expect = 5e-58
 Identities = 138/283 (48%), Positives = 148/283 (52%), Gaps = 38/283 (13%)

Query: 61  EEAEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPGPG------- 113
           EE + D  EDEEE+      E         A   G   P      G     P        
Sbjct: 32  EEEDEDEVEDEEEAASQQFLEQSLQPGLQVARWGGVALPREHIEGGGGPSDPSEFGTKFR 91

Query: 114 -PPSGGAAT---RSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFP 169
            PP   AA+   R P  KPPYSYIALITMAILQ+P KRLTLS IC FISGRFPYYR KFP
Sbjct: 92  APPRSAAASEDARQP-AKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFP 150

Query: 170 AWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLP 229
           AWQNSIRHNLSLNDCFVKIPREPG+PGKGNYW+LDP S DMFDNGSFLRRRKRFKR  L 
Sbjct: 151 AWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLT 210

Query: 230 P----PHPHPHPHPELLLR----GGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPP 281
           P    PHP P P     L     G    A  P   +PG                AY    
Sbjct: 211 PGAHLPHPFPLPAAHAALHNPRPGPLLGAPAPPQPVPG----------------AYPNTA 254

Query: 282 PGPAPHP--HPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGP 322
           PG  P+   HPHP  +   +A   A           A P P P
Sbjct: 255 PGRRPYALLHPHPLRYLLLSAPVYAGAPKKAEGAALATPAPFP 297


>gi|21618325 forkhead box E1 [Homo sapiens]
          Length = 373

 Score =  213 bits (543), Expect = 2e-55
 Identities = 160/402 (39%), Positives = 201/402 (50%), Gaps = 75/402 (18%)

Query: 55  GHEPPAEEAEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPGPGP 114
           G  PP  E  A + E+  E+                  AAG+  PG A  RGA       
Sbjct: 6   GPPPPQPEVLATVKEERGET------------------AAGAGVPGEATGRGA------- 40

Query: 115 PSGGAATRSPLV--KPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQ 172
             GG   + PL   KPPYSYIALI MAI  +P++RLTL  I +FI+ RFP+YR+    WQ
Sbjct: 41  --GGRRRKRPLQRGKPPYSYIALIAMAIAHAPERRLTLGGIYKFITERFPFYRDNPKKWQ 98

Query: 173 NSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLPPPH 232
           NSIRHNL+LNDCF+KIPRE G PGKGNYW LDP + DMF++GSFLRRRKRFKR  L   +
Sbjct: 99  NSIRHNLTLNDCFLKIPREAGRPGKGNYWALDPNAEDMFESGSFLRRRKRFKRSDL-STY 157

Query: 233 PHPHPHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPPPGPAPHPHPHP 292
           P  + H        AAAA    A  PG  A  A    Y  A+ A  APP   AP P  +P
Sbjct: 158 P-AYMHDAAAAAAAAAAAAAAAAIFPG--AVPAARPPYPGAVYAGYAPPSLAAPPPVYYP 214

Query: 293 HAFAFAAAAAAAPCQL-SVPPGRAAAP-----PPGPPTASVFAGAGSAPA------PAPA 340
                  AA+  PC++  + P R  +P     P GP  +  FA AG APA      PA  
Sbjct: 215 -------AASPGPCRVFGLVPERPLSPELGPAPSGPGGSCAFASAG-APATTTGYQPAGC 266

Query: 341 SGSGPGPGPAGLPAFLGAE----LGCAKAFYAAS------LSPPAAGTAAGLPTALLRQG 390
           +G+ P    A   A+ G +     G   A +AA+       SPPA G++ G+ T +   G
Sbjct: 267 TGARPANPSAYAAAYAGPDGAYPQGAGSAIFAAAGRLAGPASPPAGGSSGGVETTVDFYG 326

Query: 391 LKTDAGGGAGG---------GGAGAGQRPSFSIDHIMGHGGG 423
             +    GA G         GGA AG   ++   H   + GG
Sbjct: 327 RTSPGQFGALGACYNPGGQLGGASAG---AYHARHAAAYPGG 365


>gi|75677594 forkhead box D4 [Homo sapiens]
          Length = 439

 Score =  213 bits (543), Expect = 2e-55
 Identities = 127/224 (56%), Positives = 133/224 (59%), Gaps = 34/224 (15%)

Query: 114 PPSGGAAT---RSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPA 170
           PP   AA+   R P  KPP SYIALITMAILQSP KRLTLS IC FIS RFPYYR KFPA
Sbjct: 89  PPRSAAASEDARQP-AKPPSSYIALITMAILQSPHKRLTLSGICAFISDRFPYYRRKFPA 147

Query: 171 WQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKR-QPLP 229
           WQNSIRHNLSLNDCFVKIPREPG PGKGNYW+LDP S DMFDNGSFLRRRKRF+R QP P
Sbjct: 148 WQNSIRHNLSLNDCFVKIPREPGRPGKGNYWSLDPASQDMFDNGSFLRRRKRFQRHQPTP 207

Query: 230 PPH-PHPHPHPELLLRGGAAAAGDP------GAFLPGFAAYGAYGYGYGLALPAYGAPPP 282
             H PHP P P        AA  +P      GA  P     GAY             P  
Sbjct: 208 GAHLPHPFPLP-----AAHAALHNPRPGPLLGAPAPPQPVPGAY-------------PNT 249

Query: 283 GPAPHP----HPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGP 322
           GP   P    HPHP  +   +A A A           A P P P
Sbjct: 250 GPGRRPYALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPAPFP 293


>gi|11386197 forkhead box E3 [Homo sapiens]
          Length = 319

 Score =  209 bits (531), Expect = 6e-54
 Identities = 140/287 (48%), Positives = 156/287 (54%), Gaps = 29/287 (10%)

Query: 90  AAAAAGSPGPGAAAARGAAGPGPGPPSGGAATRSPLV--KPPYSYIALITMAILQSPKKR 147
           A A  G     AAA RG A P P P   G   R PL   KPPYSYIALI MA+  +P +R
Sbjct: 33  AGAEPGREPEEAAAGRGEAAPTPAP-GPGRRRRRPLQRGKPPYSYIALIAMALAHAPGRR 91

Query: 148 LTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPES 207
           LTL+ I  FI+ RF +YR+    WQNSIRHNL+LNDCFVK+PREPGNPGKGNYWTLDP +
Sbjct: 92  LTLAAIYRFITERFAFYRDSPRKWQNSIRHNLTLNDCFVKVPREPGNPGKGNYWTLDPAA 151

Query: 208 ADMFDNGSFLRRRKRFKRQPLP--------PPHPHPH------PHPELLLRGGAAAAG-D 252
           ADMFDNGSFLRRRKRFKR  LP        PP P P+      P P LL+   +A  G  
Sbjct: 152 ADMFDNGSFLRRRKRFKRAELPAHAAAAPGPPLPFPYAPYAPAPGPALLVPPPSAGPGPS 211

Query: 253 PGAFLPGFAAYGAYGYGYGLALPAYGAPPPGPAPHPHPHPHAFAFAAAAAAAPCQLSVPP 312
           P A L  F+          LA    GAP P     P     AF   AAAA+ P    VP 
Sbjct: 212 PPARL--FSVDSLVNLQPELA--GLGAPEPPCCAAPDAAAAAFPPCAAAASPPLYSQVPD 267

Query: 313 G---RAAAPPPGP-PTASVFAGAGSAPAPAPASGSGPGPGPAGLPAF 355
                A  P PGP P   + A AG A A  P S   PG      P F
Sbjct: 268 RLVLPATRPGPGPLPAEPLLALAGPAAALGPLS---PGEAYLRQPGF 311



 Score = 35.8 bits (81), Expect = 0.092
 Identities = 53/188 (28%), Positives = 62/188 (32%), Gaps = 60/188 (31%)

Query: 316 AAPPPGPPTASVFAGAGSAPAPA---PASGSGPGPGPAGLPAFLGAELGCAKAFYAASLS 372
           AA  PGPP    +A    AP PA   P   +GPGP P   PA L +           +L 
Sbjct: 176 AAAAPGPPLPFPYAPYAPAPGPALLVPPPSAGPGPSP---PARLFS------VDSLVNLQ 226

Query: 373 PPAAGTAAGLPTALLRQGLKTDAGGGAGGGGAGAGQRPSFSIDHIMGHGGGGAAPPGAGE 432
           P  AG  A  P                                         AAP  A  
Sbjct: 227 PELAGLGAPEPPCC--------------------------------------AAPDAAAA 248

Query: 433 GSPGPPFAAAAGPGGQAQVLAMLTAPALAPVAGH------IRLSHPGDAL--LSSGSRFA 484
             P  P AAAA P   +QV   L  PA  P  G       + L+ P  AL  LS G  + 
Sbjct: 249 AFP--PCAAAASPPLYSQVPDRLVLPATRPGPGPLPAEPLLALAGPAAALGPLSPGEAYL 306

Query: 485 SKVAGLSG 492
            +    SG
Sbjct: 307 RQPGFASG 314



 Score = 30.4 bits (67), Expect = 3.9
 Identities = 22/53 (41%), Positives = 24/53 (45%), Gaps = 4/53 (7%)

Query: 292 PHAFA-FAAAAAAAPCQLSVPPGRAAAPPPGPPTASVFAGAG-SAPAPAPASG 342
           P AF+ F A  A AP     PP   A   PG       AG G +AP PAP  G
Sbjct: 10  PAAFSGFPALPAVAPS--GPPPSPLAGAEPGREPEEAAAGRGEAAPTPAPGPG 60


>gi|119395716 forkhead box C1 [Homo sapiens]
          Length = 553

 Score =  190 bits (483), Expect = 2e-48
 Identities = 154/447 (34%), Positives = 199/447 (44%), Gaps = 86/447 (19%)

Query: 88  RGAAAAAGS-----PGPGAAAARGAAG---PGPGPPSGGAATRSP----LVKPPYSYIAL 135
           R AAAAAG      P P +  +  A     PG    + G  T  P    +VKPPYSYIAL
Sbjct: 27  RAAAAAAGGGYTAMPAPMSVYSHPAHAEQYPGGMARAYGPYTPQPQPKDMVKPPYSYIAL 86

Query: 136 ITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNP 195
           ITMAI  +P K++TL+ I +FI  RFP+YR+    WQNSIRHNLSLN+CFVK+PR+   P
Sbjct: 87  ITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFVKVPRDDKKP 146

Query: 196 GKGNYWTLDPESADMFDNGSFLRRRKRFKRQPL---------------PPPHPHPHPHPE 240
           GKG+YWTLDP+S +MF+NGSFLRRR+RFK++                 PPP   P P P 
Sbjct: 147 GKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDAVKDKEEKDRLHLKEPPPPGRQPPPAPP 206

Query: 241 LLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPPPGPAPHPHPHPHAFAFAAA 300
               G A     P   +                +       P P   P P   A A  + 
Sbjct: 207 EQADGNAPGPQPPPVRIQD--------------IKTENGTCPSP---PQPLSPAAALGSG 249

Query: 301 AAAAPCQLSVPPGRA------AAPPPGPPTASVFAGAGSAPAPAPASGSGPGPGPA---- 350
           +AAA  ++  P   +      ++PP   P+A   +  G+  AP P + S P P  +    
Sbjct: 250 SAAAVPKIESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPAPSAPPPHHSQGFS 309

Query: 351 ---------GLPAFLGAE-----LGCAKAFYAASLSPPAA--GTAAGLPTALLRQGLKTD 394
                    G P    AE     L  A A   A ++PP A    + G  +       +T 
Sbjct: 310 VDNIMTSLRGSPQSAAAELSSGLLASAAASSRAGIAPPLALGAYSPGQSSLYSSPCSQTS 369

Query: 395 AGGGAGGGGAGAGQRPSFSIDHIMGHGGGGA------APPGAGEGSPGPPFAAAAGPGGQ 448
           + G +GGGG GAG           G GG G       A      G  G     A G  G 
Sbjct: 370 SAGSSGGGGGGAGAAG--------GAGGAGTYHCNLQAMSLYAAGERGGHLQGAPGGAGG 421

Query: 449 AQVLAMLTAPALAPV--AGHIRLSHPG 473
           + V   L   +L PV  +    LSH G
Sbjct: 422 SAVDDPLPDYSLPPVTSSSSSSLSHGG 448


>gi|12751477 forkhead box L2 [Homo sapiens]
          Length = 376

 Score =  184 bits (466), Expect = 2e-46
 Identities = 150/393 (38%), Positives = 178/393 (45%), Gaps = 82/393 (20%)

Query: 90  AAAAAGSPGPGAAAARGAAGPGPGPPSGGAA-------TRSPLVKPPYSYIALITMAILQ 142
           AA A  +P  G    +   GP P P  GG            P  KPPYSY+ALI MAI +
Sbjct: 11  AAGALLAPETGRTV-KEPEGPPPSPGKGGGGGGGTAPEKPDPAQKPPYSYVALIAMAIRE 69

Query: 143 SPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWT 202
           S +KRLTLS I ++I  +FP+Y +    WQNSIRHNLSLN+CF+K+PRE G   KGNYWT
Sbjct: 70  SAEKRLTLSGIYQYIIAKFPFYEKNKKGWQNSIRHNLSLNECFIKVPREGGGERKGNYWT 129

Query: 203 LDPESADMFDNGSFLRRRKRFKRQPLPPPHPHPHPHPELLLRGGAAAAGDPGAFLPGFAA 262
           LDP   DMF+ G++ RRR+R KR P  PP  H  P   L   GGAA          G A 
Sbjct: 130 LDPACEDMFEKGNY-RRRRRMKR-PFRPPPAHFQPGKGLFGAGGAAGG-------CGVAG 180

Query: 263 YGAYGYGYGLALPAY--------GAPPPGPAPHPHPHPHAFAFAAAAAAAPCQLSVPPGR 314
            GA GYGY LA P Y          P P P   P P P+A    AAAAAA    +     
Sbjct: 181 AGADGYGY-LAPPKYLQSGFLNNSWPLPQP---PSPMPYASCQMAAAAAAAAAAA----- 231

Query: 315 AAAPPPGPPTASVFAGAGSAPAPAPASGSGPGPGPAGLPAFLGAELGCAKAFYAASLSPP 374
           AAA P  P  A+V  G            +GP                      AAS  P 
Sbjct: 232 AAAGPGSPGAAAVVKGL-----------AGP----------------------AASYGPY 258

Query: 375 AAGTAAGLPTALLRQGLKTDAGGGAGGGGAGAGQRPSFSIDHIMGHGGGGAAPPGAGEGS 434
               +  LP  ++      ++  G GG  A     P         H    AAPP      
Sbjct: 259 TRVQSMALPPGVV------NSYNGLGGPPAAPPPPPHPHPHPHAHHLHAAAAPP------ 306

Query: 435 PGPP-FAAAAGPGGQAQVLAMLTA--PALAPVA 464
           P PP   AAA P GQ    +  TA  PA AP +
Sbjct: 307 PAPPHHGAAAPPPGQLSPASPATAAPPAPAPTS 339



 Score = 30.4 bits (67), Expect = 3.9
 Identities = 17/28 (60%), Positives = 19/28 (67%), Gaps = 1/28 (3%)

Query: 84  ALASRGAAAAAGSPGPGAAAA-RGAAGP 110
           A A+  AAAAAG   PGAAA  +G AGP
Sbjct: 224 AAAAAAAAAAAGPGSPGAAAVVKGLAGP 251


>gi|4557595 forkhead box F2 [Homo sapiens]
          Length = 444

 Score =  181 bits (460), Expect = 1e-45
 Identities = 133/343 (38%), Positives = 165/343 (48%), Gaps = 31/343 (9%)

Query: 58  PPAEEAEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPGPGPPSG 117
           PP   A A  A  E  S   S       +S  ++ +A +P   +AA + A G G G  SG
Sbjct: 30  PPPAAAAAAAAAPETTSSSSSSSSASCASSSSSSNSASAP---SAACKSAGGGGAGAGSG 86

Query: 118 GAATRSPLV----KPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQN 173
           GA   S  +    KPPYSYIALI MAI  SP KRLTLSEI +F+  RFP++R  +  W+N
Sbjct: 87  GAKKASSGLRRPEKPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKN 146

Query: 174 SIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKR--QPLPPP 231
           S+RHNLSLN+CF+K+P+  G PGKG+YWT+DP S  MF+ GSF RR + F+R  Q L P 
Sbjct: 147 SVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFRRKCQALKPM 206

Query: 232 HPHPHP---HPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPPPGPAPHP 288
           +            LL  G      P A L G  + G YG G  +    Y A    P+ H 
Sbjct: 207 YHRVVSGLGFGASLLPQGFDFQAPPSAPL-GCHSQGGYG-GLDMMPAGYDAGAGAPS-HA 263

Query: 289 HPHPHAFAFAAAAAAAPCQLSVPPG---RAAAPPPGPPTASVFAGAGSAPAPAPASGSGP 345
           HPH H              +S  PG    A+ P P  P     AG G      P S S P
Sbjct: 264 HPHHHHHHHVP-------HMSPNPGSTYMASCPVPAGPGGVGAAGGGGGGDYGPDSSSSP 316

Query: 346 GPGPAGLPAFLGAELGCAKAFY--AASLSPPAAGTAAGLPTAL 386
            P     PA   A + C   +   AA  S P A      P AL
Sbjct: 317 VPSS---PAMASA-IECHSPYTSPAAHWSSPGASPYLKQPPAL 355



 Score = 34.3 bits (77), Expect = 0.27
 Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 5/92 (5%)

Query: 321 GPPTASVFAGAGSAPAPAPASGSGPGPGPAGLPAFLGAELGCAKAFYAASL-SPPAAGTA 379
           GPP A +       P    A+   P P  A   A        + +  +AS  S  ++  +
Sbjct: 6   GPPPAPLRRACSPVPGALQAALMSPPPAAAAAAAAAPETTSSSSSSSSASCASSSSSSNS 65

Query: 380 AGLPTALLRQGLKTDAGGGAGGGGAGAGQRPS 411
           A  P+A      K+  GGGAG G  GA +  S
Sbjct: 66  ASAPSA----ACKSAGGGGAGAGSGGAKKASS 93



 Score = 29.6 bits (65), Expect = 6.6
 Identities = 18/74 (24%), Positives = 32/74 (43%)

Query: 271 GLALPAYGAPPPGPAPHPHPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGPPTASVFAG 330
           G    A  +PPP  A      P   + ++++++A C  S     +A+ P     ++   G
Sbjct: 21  GALQAALMSPPPAAAAAAAAAPETTSSSSSSSSASCASSSSSSNSASAPSAACKSAGGGG 80

Query: 331 AGSAPAPAPASGSG 344
           AG+    A  + SG
Sbjct: 81  AGAGSGGAKKASSG 94


>gi|24497501 forkhead box A1 [Homo sapiens]
          Length = 472

 Score =  174 bits (442), Expect = 1e-43
 Identities = 117/286 (40%), Positives = 143/286 (50%), Gaps = 36/286 (12%)

Query: 82  PRALASRGA--AAAAGSPGPGAAAARGAAGPGPGPPSGGAATRS-------------PLV 126
           P  + + GA  AA+    GP AAA      P    PS    +R+             P  
Sbjct: 110 PSGMGAMGAQQAASMNGLGPYAAAMNPCMSPMAYAPSNLGRSRAGGGGDAKTFKRSYPHA 169

Query: 127 KPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFV 186
           KPPYSYI+LITMAI Q+P K LTLSEI ++I   FPYYR+    WQNSIRH+LS NDCFV
Sbjct: 170 KPPYSYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFV 229

Query: 187 KIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLPPPHPHPHPHPELLLRGG 246
           K+ R P  PGKG+YWTL P+S +MF+NG +LRR+KRFK +  P               GG
Sbjct: 230 KVARSPDKPGKGSYWTLHPDSGNMFENGCYLRRQKRFKCEKQPGAGGGGGSG-----SGG 284

Query: 247 AAAAGDP-------GAFLPGFAAYGAYGYGYGLALPAYGAPPPGPAPHPHPHPHAFAFAA 299
           + A G P       GA  P  A    +   +G      GAP PGPA  P    H+ A A 
Sbjct: 285 SGAKGGPESRKDPSGASNPS-ADSPLHRGVHGKTGQLEGAPAPGPAASPQTLDHSGATAT 343

Query: 300 AAAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAPAPAPASGSGP 345
             A+   +L  P    A     PP +S      S PA  PA G  P
Sbjct: 344 GGAS---ELKTPASSTA-----PPISSGPGALASVPASHPAHGLAP 381



 Score = 33.9 bits (76), Expect = 0.35
 Identities = 32/106 (30%), Positives = 42/106 (39%), Gaps = 27/106 (25%)

Query: 31  GGGSGGGELPARSGPRAPRDVLPHGHEPPAEEAEADLAEDEEESGGCSDG--------EP 82
           GGGSG G   A+ GP + +D  P G   P+  A++ L        G  +G         P
Sbjct: 277 GGGSGSGGSGAKGGPESRKD--PSGASNPS--ADSPLHRGVHGKTGQLEGAPAPGPAASP 332

Query: 83  RALASRGAAAAAG---------------SPGPGAAAARGAAGPGPG 113
           + L   GA A  G               S GPGA A+  A+ P  G
Sbjct: 333 QTLDHSGATATGGASELKTPASSTAPPISSGPGALASVPASHPAHG 378



 Score = 31.2 bits (69), Expect = 2.3
 Identities = 31/113 (27%), Positives = 41/113 (36%), Gaps = 22/113 (19%)

Query: 396 GGGAGGGGAGAGQRPSF----------SIDHIMGHGGGGAAPPGAGEGSPGPPF------ 439
           GGG+G GG+GA   P            S D  +  G  G      G  +PGP        
Sbjct: 277 GGGSGSGGSGAKGGPESRKDPSGASNPSADSPLHRGVHGKTGQLEGAPAPGPAASPQTLD 336

Query: 440 ---AAAAGPGGQAQVLAMLTAPALAPVAG---HIRLSHPGDALLSSGSRFASK 486
              A A G   + +  A  TAP ++   G    +  SHP   L    S+   K
Sbjct: 337 HSGATATGGASELKTPASSTAPPISSGPGALASVPASHPAHGLAPHESQLHLK 389


>gi|145309320 forkhead box Q1 [Homo sapiens]
          Length = 403

 Score =  172 bits (437), Expect = 5e-43
 Identities = 142/376 (37%), Positives = 169/376 (44%), Gaps = 51/376 (13%)

Query: 25  ADIDVVGGGSGGGELPARSGPRAPRDVLPHGHEPPAEEAEADLAEDEEESGGCSDGEPRA 84
           +D++  GG      L A        D     + P A     D   D E+S G   G   A
Sbjct: 18  SDLEGAGGSDAPSPLSAAGDDSLGSDGDCAANSPAAGGGARDTQGDGEQSAGGGPGAEEA 77

Query: 85  LASRGAAAAAGSPGPGAAAARGAAGPGPGPPSGGAATRSPLV----KPPYSYIALITMAI 140
           +    AAAAA     GA A  GAAGPG G    G   RS       KPPYSYIALI MAI
Sbjct: 78  IP---AAAAAAVVAEGAEA--GAAGPGAGGAGSGEGARSKPYTRRPKPPYSYIALIAMAI 132

Query: 141 LQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNP-GKGN 199
             S   RLTL+EI E++ G+FP++R  +  W+NS+RHNLSLNDCFVK+ R+P  P GK N
Sbjct: 133 RDSAGGRLTLAEINEYLMGKFPFFRGSYTGWRNSVRHNLSLNDCFVKVLRDPSRPWGKDN 192

Query: 200 YWTLDPESADMFDNGSFLRRRKRFK-RQPLPPPHPHPHPHPEL--------------LLR 244
           YW L+P S   F +G F RRRKR   R P+P P   P   P L               +R
Sbjct: 193 YWMLNPNSEYTFADGVFRRRRKRLSHRAPVPAPGLRPEEAPGLPAAPPPAPAAPASPRMR 252

Query: 245 GGAAA---AGDPGAFLPGFAAYGAYGYGYGLALPAYGAPPP----GPAPHPHPHPHAFAF 297
             A     A   G F   FA        +        AP      G AP P P P   AF
Sbjct: 253 SPARQEERASPAGKFSSSFAIDSILRKPFRSRRLRDTAPGTTLQWGAAPCP-PLP---AF 308

Query: 298 AAAAAAAPCQLSVP--------PGRAAA-----PPPGPPT--ASVFAGAGSAPAPAPASG 342
            A   AAPC+  +P        P R  A     PP  PP   A + A A + P   PA+G
Sbjct: 309 PALLPAAPCRALLPLCAYGAGEPARLGAREAEVPPTAPPLLLAPLPAAAPAKPLRGPAAG 368

Query: 343 SGPGPGPAGLPAFLGA 358
                 P  LPA L A
Sbjct: 369 GAHLYCPLRLPAALQA 384



 Score = 38.5 bits (88), Expect = 0.014
 Identities = 41/175 (23%), Positives = 63/175 (36%), Gaps = 31/175 (17%)

Query: 321 GPPTASVFAGAGSAPAPAPASGSGPGPGPAGLPAFLGAELGCAKAFYAASLSPPAAGTAA 380
           G    S   GAG + AP+P S +G           LG++  CA        + PAAG  A
Sbjct: 13  GDKQGSDLEGAGGSDAPSPLSAAGDDS--------LGSDGDCAA-------NSPAAGGGA 57

Query: 381 GLPTALLRQGLKTDAGGGAGGGGAGAGQRPSFSIDHIMGHG------GGGAAPPGAGEGS 434
                   +  + D    AGGG       P+ +   ++  G      G GA   G+GEG+
Sbjct: 58  --------RDTQGDGEQSAGGGPGAEEAIPAAAAAAVVAEGAEAGAAGPGAGGAGSGEGA 109

Query: 435 PGPPFAAAAGPGGQAQVLAMLTAPALAPVAGHIRLSHPGDALLSSGSRFASKVAG 489
              P+     P      +A++         G + L+   + L+     F     G
Sbjct: 110 RSKPYTRRPKP--PYSYIALIAMAIRDSAGGRLTLAEINEYLMGKFPFFRGSYTG 162


>gi|61966923 forkhead box B2 [Homo sapiens]
          Length = 432

 Score =  170 bits (431), Expect = 2e-42
 Identities = 116/311 (37%), Positives = 142/311 (45%), Gaps = 44/311 (14%)

Query: 127 KPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFV 186
           KPPYSYI+L  MAI  S +K L LS+I +FI  RFPYYRE    WQNS+RHNLS NDCF+
Sbjct: 13  KPPYSYISLTAMAIQHSAEKMLPLSDIYKFIMERFPYYREHTQRWQNSLRHNLSFNDCFI 72

Query: 187 KIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLPPPHPHPHPHPELLLRGG 246
           KIPR P  PGKG++W L P+  DMF+NGSFLRRRKRFK   L   H H H          
Sbjct: 73  KIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKRFK--VLRADHTHLH---------A 121

Query: 247 AAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPPPGPAPHPHPHPHAFAFAAAAAAAPC 306
            +    PGA                          PG   HPH H H        AAA  
Sbjct: 122 GSTKSAPGA-------------------------GPGGHLHPHHHHHPHHHHHHHAAAHH 156

Query: 307 QLSVPPGRAAAPPPGPPTASV---FAGAGSAPAPAPASGSGPGPGP-----AGLPAFLGA 358
                P +   PPP PP   V        +AP P P   S P   P        P+  G 
Sbjct: 157 HHHHHPPQPPPPPPPPPPHMVHYFHQQPPTAPQPPPHLPSQPPQQPPQQSQPQQPSHPGK 216

Query: 359 ELGCAKAFYAASLSPPAAGTAAGLPTALLRQGLKTDAGGGAGGGGAGAGQRPSFSIDHIM 418
               A    AA+ +  AA  + G  +     GL + A   A    + +G +  F+I++I+
Sbjct: 217 MQEAAAVAAAAAAAAAAAVGSVGRLSQFPPYGLGSAAAAAAAAAASTSGFKHPFAIENII 276

Query: 419 GHGGGGAAPPG 429
           G    G    G
Sbjct: 277 GRDYKGVLQAG 287



 Score = 33.5 bits (75), Expect = 0.46
 Identities = 52/174 (29%), Positives = 56/174 (32%), Gaps = 26/174 (14%)

Query: 247 AAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPPPGPAPH---------------PHPH 291
           AAAA     F   FA     G  Y   L A G P      H                 PH
Sbjct: 257 AAAAASTSGFKHPFAIENIIGRDYKGVLQAGGLPLASVMHHLGYPVPGQLGNVVSSVWPH 316

Query: 292 PHAFAFAAAAAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAPAPAPASGSGPGPGPAG 351
                  AAAAAA     VP G    P  G     V +   SA    PA      P PA 
Sbjct: 317 VGVMDSVAAAAAAAAAAGVPVG----PEYGAFGVPVKSLCHSASQSLPAMPVPIKPTPA- 371

Query: 352 LPAFLGAELGCAKAFYAASLSPPAAGT----AAGLPTALLRQGLKTDAGGGAGG 401
           LP     + G      AAS  PPA  T    AA  P A L +     +    GG
Sbjct: 372 LPPVSALQPGLTVP--AASQQPPAPSTVCSAAAASPVASLLEPTAPTSAESKGG 423


>gi|28973785 forkhead box S1 [Homo sapiens]
          Length = 330

 Score =  166 bits (421), Expect = 3e-41
 Identities = 128/320 (40%), Positives = 152/320 (47%), Gaps = 37/320 (11%)

Query: 110 PGPGPPSGGAATRSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFP 169
           P PGP   GA T  P  KPPYSYIALI MAI  SP +R TLS I  +I GRF +YR   P
Sbjct: 5   PLPGP---GAPTTEP-TKPPYSYIALIAMAIQSSPGQRATLSGIYRYIMGRFAFYRHNRP 60

Query: 170 AWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLP 229
            WQNSIRHNLSLN+CFVK+PR+   PGKG+YWTLDP+  DMF++GSFLRRR+RF RQ   
Sbjct: 61  GWQNSIRHNLSLNECFVKVPRDDRKPGKGSYWTLDPDCHDMFEHGSFLRRRRRFTRQTGA 120

Query: 230 PPHPHPHPHPELLLRGGAAAAGDPGA-------FLPGFAAYGAYGYGYGL--ALPAYGAP 280
                P       LR  +   G P A       F P         +G GL  A+PA   P
Sbjct: 121 EGTRGPAKARRGPLRATSQDPGVPNATTGRQCSFPPELPDPKGLSFG-GLVGAMPASMCP 179

Query: 281 PPGPAPHPHPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGPPTA-SVFAGAGSAPAPAP 339
                  P P       +    A P +L V    ++ P  G P   S       AP P  
Sbjct: 180 ATTDG-RPRPPMEPKEISTPKPACPGELPVATSSSSCPAFGFPAGFSEAESFNKAPTPVL 238

Query: 340 ASGSGPGPG----PAGLPAFLGAELGCAKAFYAASLSP----PAAGTAAGLPTALLRQGL 391
           +  SG G         L   +GA+ G      +A+ SP    P     A LP       L
Sbjct: 239 SPESGIGSSYQCRLQALNFCMGADPGLEHLLASAAPSPAPPTPPGSLRAPLP-------L 291

Query: 392 KTD------AGGGAGGGGAG 405
            TD      AGG    GG+G
Sbjct: 292 PTDHKEPWVAGGFPVQGGSG 311



 Score = 29.3 bits (64), Expect = 8.6
 Identities = 28/93 (30%), Positives = 34/93 (36%), Gaps = 5/93 (5%)

Query: 37  GELP-ARSGPRAPRDVLPHGHEPPAEEAEADLAEDEEESGGCSDGEPRALASRGAAAAAG 95
           GELP A S    P    P G        +A       ESG  S  + R  A      A  
Sbjct: 204 GELPVATSSSSCPAFGFPAGFSEAESFNKAPTPVLSPESGIGSSYQCRLQALNFCMGA-- 261

Query: 96  SPGPGAAAARGAAGPGPGPPSGGAATRSPLVKP 128
              PG      +A P P PP+   + R+PL  P
Sbjct: 262 --DPGLEHLLASAAPSPAPPTPPGSLRAPLPLP 292


>gi|4885237 forkhead box C2 [Homo sapiens]
          Length = 501

 Score =  166 bits (420), Expect = 5e-41
 Identities = 143/408 (35%), Positives = 174/408 (42%), Gaps = 56/408 (13%)

Query: 85  LASRGAAAAAGSPGPGAAAARGAAGPGPGPPSGGA------------ATRSPLVKPPYSY 132
           L+ +    AAGS G G A+  G     P   S G             A    LVKPPYSY
Sbjct: 19  LSEQNYYRAAGSYG-GMASPMGVYSGHPEQYSAGMGRSYAPYHHHQPAAPKDLVKPPYSY 77

Query: 133 IALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREP 192
           IALITMAI  +P+K++TL+ I +FI  RFP+YRE    WQNSIRHNLSLN+CFVK+PR+ 
Sbjct: 78  IALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFVKVPRDD 137

Query: 193 GNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPL---PPPHPHPHPHPELLLRGGAAA 249
             PGKG+YWTLDP+S +MF+NGSFLRRR+RFK++ +        H    P    +G  A 
Sbjct: 138 KKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSKEKEERAHLKEPPPAASKGAPAT 197

Query: 250 AGDPGAFLPGFAAYGAYGYGYGLALPA---YGAPPPGPAPHPHPHPHAFAFAAAAAAAPC 306
                A                 ALP         P  A    P       AA+  A   
Sbjct: 198 PHLADAPKEAEKKVVIKSEAASPALPVITKVETLSPESALQGSPRS-----AASTPAGSP 252

Query: 307 QLSVPPGRAAAPP--PG------------PPTASVFAGAGSAPAPAPASG---SGPGPGP 349
             S+P   AAAP   PG            PP   +  GAG A    P      +   P  
Sbjct: 253 DGSLPEHHAAAPNGLPGFSVENIMTLRTSPPGGELSPGAGRAGLVVPPLALPYAAAPPAA 312

Query: 350 AGLPAFLGAELGCAKAFYAASLSPPAAGTAAGLPTAL-----LRQGLKTDAGG------- 397
            G P   G E G A   Y  S+   +  T A  P  +     L + L     G       
Sbjct: 313 YGQPCAQGLEAGAAGG-YQCSMRAMSLYTGAERPAHMCVPPALDEALSDHPSGPTSPLSA 371

Query: 398 -GAGGGGAGAGQRPSFSIDHIMGHGGGGAAPPGAGEGSPGP-PFAAAA 443
                G  GA         H   H      PP A +  P P P AAAA
Sbjct: 372 LNLAAGQEGALAATGHHHQHHGHHHPQAPPPPPAPQPQPTPQPGAAAA 419



 Score = 36.2 bits (82), Expect = 0.070
 Identities = 25/55 (45%), Positives = 28/55 (50%), Gaps = 6/55 (10%)

Query: 249 AAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPPPGPAPHPHPHPHAFAFAAAAAA 303
           AAG  GA     AA G +   +G   P   APPP PAP P P P   A AA AA+
Sbjct: 375 AAGQEGAL----AATGHHHQHHGHHHPQ--APPPPPAPQPQPTPQPGAAAAQAAS 423



 Score = 29.3 bits (64), Expect = 8.6
 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 3/65 (4%)

Query: 427 PPGAGEGSPGPPFAAAAGPGGQAQVL--AMLTAPALAPVAGHIRLSHPGDALLSSGSRFA 484
           PP A +G+P  P  A A    + +V+  +   +PAL PV   +    P  AL  S    A
Sbjct: 187 PPAASKGAPATPHLADAPKEAEKKVVIKSEAASPAL-PVITKVETLSPESALQGSPRSAA 245

Query: 485 SKVAG 489
           S  AG
Sbjct: 246 STPAG 250


>gi|105554437 forkhead box B1 [Homo sapiens]
          Length = 325

 Score =  160 bits (405), Expect = 2e-39
 Identities = 120/299 (40%), Positives = 146/299 (48%), Gaps = 58/299 (19%)

Query: 127 KPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFV 186
           KPPYSYI+L  MAI  SP+K L LSEI +FI  RFPYYRE    WQNS+RHNLS NDCF+
Sbjct: 13  KPPYSYISLTAMAIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNLSFNDCFI 72

Query: 187 KIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFK------RQPLPPPHPHPHPHPE 240
           KIPR P  PGKG++W L P   DMF+NGSFLRRRKRFK        P  P     +   +
Sbjct: 73  KIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKRFKVLKSDHLAPSKPADAAQYLQQQ 132

Query: 241 LLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALP-----------------------AY 277
             LR  A AA   G  LP   A  AY  G G+A P                       A+
Sbjct: 133 AKLRLSALAAS--GTHLPQMPA-AAYNLG-GVAQPSGFKHPFAIENIIAREYKMPGGLAF 188

Query: 278 GAPPPGPAPHPHPH-------------PHAFAFAAAAAAAPCQLSVPPGRAAAPPPGPPT 324
            A  P PA +P P+             PH +  A    +A   +S+  G  +A   G P 
Sbjct: 189 SAMQPVPAAYPLPNQLTTMGSSLGTGWPHVYGSAGMIDSA-TPISMASGDYSA--YGVPL 245

Query: 325 ASVFAGAG-SAPA-PAPASGSGPGPGPAGLPAF--LGAELGCAKAFYAASLSPPAAGTA 379
             +   AG + PA P P       P PA +PA   L A +    +    SLSP ++ TA
Sbjct: 246 KPLCHAAGQTLPAIPVPIK-----PTPAAVPALPALPAPIPTLLSNSPPSLSPTSSQTA 299


>gi|195947376 forkhead box I2 [Homo sapiens]
          Length = 318

 Score =  159 bits (403), Expect = 4e-39
 Identities = 115/314 (36%), Positives = 143/314 (45%), Gaps = 45/314 (14%)

Query: 50  DVLPHGHEPPAEEAEADLAEDEEESGGCSDGEPR------ALASRGAAAAAGSPGPGAAA 103
           D+ P    P   +A A     E    G   G P       AL+ +  A+  G   P AA 
Sbjct: 7   DLGPSSAPPGQAQATAHPPGYEPGDLGAVGGGPLLWVNAPALSPKSYASGPGPAPPYAAP 66

Query: 104 ARGAAGPGPGPPSG------------GAATRSPLVKPPYSYIALITMAILQSPKKRLTLS 151
           + GA GP  G P G            G      LV+PPYSY ALI MAI  +P ++LTLS
Sbjct: 67  SYGAPGPLLGAPGGLAGADLAWLSLSGQQELLRLVRPPYSYSALIAMAIQSAPLRKLTLS 126

Query: 152 EICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMF 211
           +I ++++G FP+Y+     WQNSIRHNLSLNDCF K+PR+  +PGKGNYWTLDP    MF
Sbjct: 127 QIYQYVAGNFPFYKRSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMF 186

Query: 212 DNGSFLRRRKRFKRQPLPPPHPHPHPHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYG 271
           DNG+F R+RKR                     R  A+AA   GA   G A   A      
Sbjct: 187 DNGNFRRKRKR---------------------RAEASAAVRSGARSVGGAEAPALEPPSA 225

Query: 272 LALPAYGAPPPGPAPHPHPHPHAFAFAAAAAAAPCQLSVPPGRAAAP---PPGPPTASVF 328
             L    +P P     P        FA+A +A    L   PG  A        PPT +  
Sbjct: 226 ACLDLQASPSPSA---PEAATCFSGFASAMSALAGGLGTFPGGLAGDFSFGRRPPTVATH 282

Query: 329 AGAGSAPAPAPASG 342
           A     P+P  A G
Sbjct: 283 APQTLNPSPGFAPG 296


>gi|24497506 forkhead box A3 [Homo sapiens]
          Length = 350

 Score =  159 bits (401), Expect = 7e-39
 Identities = 95/220 (43%), Positives = 113/220 (51%), Gaps = 32/220 (14%)

Query: 85  LASRGAAAAAGSPGPGAAAARGAAGPGPGPPSGGAAT--------RSPLV--KPPYSYIA 134
           LA    AA  G   PG   + G++  G G P  G           R PL   KPPYSYI+
Sbjct: 65  LAPPAPAAPLGPTFPGLGVSGGSSSSGYGAPGPGLVHGKEMPKGYRRPLAHAKPPYSYIS 124

Query: 135 LITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGN 194
           LITMAI Q+P K LTLSEI ++I   FPYYRE    WQNSIRH+LS NDCFVK+ R P  
Sbjct: 125 LITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDK 184

Query: 195 PGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLPPPHPHPHPHPELLLRGGAAAAGDPG 254
           PGKG+YW L P S +MF+NG +LRR+KRFK +             E + +GG+ AA    
Sbjct: 185 PGKGSYWALHPSSGNMFENGCYLRRQKRFKLE-------------EKVKKGGSGAA---- 227

Query: 255 AFLPGFAAYGAYGYGYGLALPAYGAPPPGPAPHPHPHPHA 294
                       G       PA     P   P P P P A
Sbjct: 228 -----TTTRNGTGSAASTTTPAATVTSPPQPPPPAPEPEA 262



 Score = 30.0 bits (66), Expect = 5.0
 Identities = 13/39 (33%), Positives = 17/39 (43%)

Query: 310 VPPGRAAAPPPGPPTASVFAGAGSAPAPAPASGSGPGPG 348
           +P G  A P P  P    F G G +   + +    PGPG
Sbjct: 60  LPSGPLAPPAPAAPLGPTFPGLGVSGGSSSSGYGAPGPG 98


>gi|24497504 forkhead box A2 isoform 2 [Homo sapiens]
          Length = 457

 Score =  157 bits (398), Expect = 2e-38
 Identities = 112/295 (37%), Positives = 140/295 (47%), Gaps = 74/295 (25%)

Query: 87  SRGAAAAAGSPGPGAAAARGAAGPGPGP---PSGGAA--------------TRSPL---- 125
           S GA A AG  G   AA     GP   P   P GG A              + SP+    
Sbjct: 81  SPGAGAMAGMGGSAGAAGVAGMGPHLSPSLSPLGGQAAGAMGGLAPYANMNSMSPMYGQA 140

Query: 126 -----------------VKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKF 168
                             KPPYSYI+LITMAI QSP K LTLSEI ++I   FP+YR+  
Sbjct: 141 GLSRARDPKTYRRSYTHAKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQ 200

Query: 169 PAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPL 228
             WQNSIRH+LS NDCF+K+PR P  PGKG++WTL P+S +MF+NG +LRR+KRFK +  
Sbjct: 201 QRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCE-- 258

Query: 229 PPPHPHPHPHPELLLRGGAAAAGDPGAFLPGF-AAYGAYGYGYGLALPAYGAPPPGPAPH 287
                      +L L+  A AAG       G  A+    G   G   PA   P    +PH
Sbjct: 259 ----------KQLALKEAAGAAGSGKKAAAGAQASQAQLGEAAG---PASETPAGTESPH 305

Query: 288 PHPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAPAPAPASG 342
                        ++A+PCQ     G       G P A++     S P PAP+ G
Sbjct: 306 -------------SSASPCQEHKRGGLGEL--KGTPAAAL-----SPPEPAPSPG 340


>gi|194394143 forkhead box A2 isoform 1 [Homo sapiens]
          Length = 463

 Score =  157 bits (398), Expect = 2e-38
 Identities = 112/295 (37%), Positives = 140/295 (47%), Gaps = 74/295 (25%)

Query: 87  SRGAAAAAGSPGPGAAAARGAAGPGPGP---PSGGAA--------------TRSPL---- 125
           S GA A AG  G   AA     GP   P   P GG A              + SP+    
Sbjct: 87  SPGAGAMAGMGGSAGAAGVAGMGPHLSPSLSPLGGQAAGAMGGLAPYANMNSMSPMYGQA 146

Query: 126 -----------------VKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKF 168
                             KPPYSYI+LITMAI QSP K LTLSEI ++I   FP+YR+  
Sbjct: 147 GLSRARDPKTYRRSYTHAKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQ 206

Query: 169 PAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPL 228
             WQNSIRH+LS NDCF+K+PR P  PGKG++WTL P+S +MF+NG +LRR+KRFK +  
Sbjct: 207 QRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCE-- 264

Query: 229 PPPHPHPHPHPELLLRGGAAAAGDPGAFLPGF-AAYGAYGYGYGLALPAYGAPPPGPAPH 287
                      +L L+  A AAG       G  A+    G   G   PA   P    +PH
Sbjct: 265 ----------KQLALKEAAGAAGSGKKAAAGAQASQAQLGEAAG---PASETPAGTESPH 311

Query: 288 PHPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAPAPAPASG 342
                        ++A+PCQ     G       G P A++     S P PAP+ G
Sbjct: 312 -------------SSASPCQEHKRGGLGEL--KGTPAAAL-----SPPEPAPSPG 346


>gi|22779860 forkhead box L1 [Homo sapiens]
          Length = 345

 Score =  157 bits (398), Expect = 2e-38
 Identities = 123/343 (35%), Positives = 158/343 (46%), Gaps = 42/343 (12%)

Query: 92  AAAGSP-----GPGAAAARGAAGPGPGPPSGGAATRSPLVKPPYSYIALITMAILQSPKK 146
           A A SP     GP       A  P     + G A      KPPYSYIALI MAI  +P++
Sbjct: 11  ALAASPMLYLYGPERPGLPLAFAPAAALAASGRAETPQ--KPPYSYIALIAMAIQDAPEQ 68

Query: 147 RLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPE 206
           R+TL+ I +FI  RFP+Y +    WQNSIRHNLSLNDCFVK+PRE G PGKG+YWTLDP 
Sbjct: 69  RVTLNGIYQFIMDRFPFYHDNRQGWQNSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPR 128

Query: 207 SADMFDNGSFLRRRKRFKRQPLPPPHPHPHPHPELLLRGGAAAAGDPGAFLPGFAAYGAY 266
             DMF+NG++ RR+++ K  P  P    P            +A   P A        G+ 
Sbjct: 129 CLDMFENGNYRRRKRKPKPGPGAPEAKRPRAETH-----QRSAEAQPEA--------GSG 175

Query: 267 GYGYGLALPAYGAPPPGPAPHPHPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGPPTAS 326
             G G A+    A P GP+P              +  AP      PG A+   P      
Sbjct: 176 AGGSGPAISRLQAAPAGPSP---------LLDGPSPPAPLHW---PGTAS---PNEDAGD 220

Query: 327 VFAGAGSAPAPAPASGSGPGPGPAGLPAFLGAELGCAKAFYAASLSPPAAGTAAGLPTA- 385
              GA +A A   A+ +G GPG    PA   +     K+  + S+    AG     P + 
Sbjct: 221 AAQGA-AAVAVGQAARTGDGPGSPLRPASRSSPKSSDKS-KSFSIDSILAGKQGQKPPSG 278

Query: 386 -LLRQGLKTDAGGGAGGG--GAGAGQRPSFSIDHIMG-HGGGG 424
             L  G K   GG  G     A +  RP F+   ++  H  GG
Sbjct: 279 DELLGGAKPGPGGRLGASLLAASSSLRPPFNASLMLDPHVQGG 321



 Score = 33.1 bits (74), Expect = 0.60
 Identities = 33/104 (31%), Positives = 43/104 (41%), Gaps = 17/104 (16%)

Query: 21  SEADADIDVVGGGSGGGELPARSGPRAPRDVLPHGHEPPAEEAEADLAEDEEESGGCSDG 80
           +EA  +     GGSG      ++ P  P  +L  G  PPA       A   E++G     
Sbjct: 166 AEAQPEAGSGAGGSGPAISRLQAAPAGPSPLLD-GPSPPAPLHWPGTASPNEDAGD---- 220

Query: 81  EPRALASRGAAAAAGSPGPGAAAARGAAGPGPGPPSGGAATRSP 124
                A++GAAA A     G AA     G GPG P   A+  SP
Sbjct: 221 -----AAQGAAAVA----VGQAA---RTGDGPGSPLRPASRSSP 252


>gi|110735445 forkhead box F1 [Homo sapiens]
          Length = 379

 Score =  153 bits (386), Expect = 4e-37
 Identities = 107/290 (36%), Positives = 140/290 (48%), Gaps = 43/290 (14%)

Query: 95  GSPGPGAAAARGAAGPGPGPPSG-GAATRSPLVKPPYSYIALITMAILQSPKKRLTLSEI 153
           G  G G  AA   A  GP       A  R P  KPPYSYIALI MAI  SP KRLTLSEI
Sbjct: 16  GGGGGGGGAAMDPASSGPSKAKKTNAGIRRP-EKPPYSYIALIVMAIQSSPTKRLTLSEI 74

Query: 154 CEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDN 213
            +F+  RFP++R  +  W+NS+RHNLSLN+CF+K+P+  G PGKG+YWT+DP S  MF+ 
Sbjct: 75  YQFLQSRFPFFRGSYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEE 134

Query: 214 GSFLRRRKRFKR--QPLPPPHPH---------PHPHPELLLRGGAAAAGDPGAFLPGFAA 262
           GSF RR + F+R  Q L P +           P  +      GG +   +  A   G   
Sbjct: 135 GSFRRRPRGFRRKCQALKPMYSMMNGLGFNHLPDTYGFQGSAGGLSCPPNSLALEGGLGM 194

Query: 263 YGAY--GYGYGLALPAYGAPPPGPAPHPHPHPHAFAFAAAA------AAAPCQLSVPPGR 314
              +  G   G+ALP++  P   P+   H +      AAA       ++ P    +P G 
Sbjct: 195 MNGHLPGNVDGMALPSHSVPHL-PSNGGHSYMGGCGGAAAGEYPHHDSSVPASPLLPTGA 253

Query: 315 AAAPPP----------GPPTASVFAGAGSA-----------PAPAPASGS 343
                P           PP+AS    +G++           PA  P SGS
Sbjct: 254 GGVMEPHAVYSGSAAAWPPSASAALNSGASYIKQQPLSPCNPAANPLSGS 303


>gi|208431824 forkhead box I3 [Homo sapiens]
          Length = 420

 Score =  150 bits (379), Expect = 3e-36
 Identities = 88/211 (41%), Positives = 111/211 (52%), Gaps = 46/211 (21%)

Query: 58  PPAEEAEADLAEDEEESGGCSD----------GEPRALASRGAAAAAGSPGP----GAAA 103
           PPA  A   LA+        ++          G P + A+  AAA  G+P P    GAAA
Sbjct: 30  PPAARAPYGLADYAAPPAAAANPYLWLNGPGVGGPPSAAAAAAAAYLGAPPPPPPPGAAA 89

Query: 104 A----------------RGAAGPGPGPPSGGAATRSP----------------LVKPPYS 131
                            R  A P P  P+  AA   P                +V+PPYS
Sbjct: 90  GPFLQPPPAAGTFGCSQRPFAQPAPAAPASPAAPAGPGELGWLSMASREDLMKMVRPPYS 149

Query: 132 YIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPRE 191
           Y ALI MAI  +P+++LTLS I +F++  FP+Y+     WQNSIRHNLSLNDCF K+PR+
Sbjct: 150 YSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQNSIRHNLSLNDCFKKVPRD 209

Query: 192 PGNPGKGNYWTLDPESADMFDNGSFLRRRKR 222
             +PGKGNYWTLDP    MFDNG+F R+RKR
Sbjct: 210 EDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 240



 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 44/115 (38%), Positives = 47/115 (40%), Gaps = 15/115 (13%)

Query: 247 AAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPP----PGPAPHPHPHPHAFAFAAAAA 302
           AA A  PGA     A YG   Y    A PA  A P     GP     P   A A AA   
Sbjct: 21  AATAAAPGAPPAARAPYGLADYA---APPAAAANPYLWLNGPGVGGPPSAAAAAAAAYLG 77

Query: 303 AAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAP--APAPASGSGP----GPGPAG 351
           A P     PPG AA P   PP A+   G    P   PAPA+ + P    GPG  G
Sbjct: 78  APPPP--PPPGAAAGPFLQPPPAAGTFGCSQRPFAQPAPAAPASPAAPAGPGELG 130



 Score = 40.0 bits (92), Expect = 0.005
 Identities = 40/123 (32%), Positives = 50/123 (40%), Gaps = 10/123 (8%)

Query: 263 YGAYGYGYGLALPAYGAPPPGPAPHPH-PHPHA-FAFAAAAAAAPCQLSVPPGRAAAPPP 320
           +G Y    GL  PA  A  PG  P    P+  A +A   AAAA P      PG       
Sbjct: 9   FGVYSQP-GLPPPAATAAAPGAPPAARAPYGLADYAAPPAAAANPYLWLNGPGVG----- 62

Query: 321 GPPTASVFAGAGSAPAPAPASGSGPGPGPAGLPAFLGAELGCAKAFYA--ASLSPPAAGT 378
           GPP+A+  A A    AP P    G   GP   P       GC++  +A  A  +P +   
Sbjct: 63  GPPSAAAAAAAAYLGAPPPPPPPGAAAGPFLQPPPAAGTFGCSQRPFAQPAPAAPASPAA 122

Query: 379 AAG 381
            AG
Sbjct: 123 PAG 125


>gi|32307177 forkhead box G1 [Homo sapiens]
          Length = 489

 Score =  148 bits (374), Expect = 1e-35
 Identities = 134/401 (33%), Positives = 167/401 (41%), Gaps = 60/401 (14%)

Query: 40  PARSGPRAPRDVLPHGHEPPAEEAEADLAEDEEESG-GCSDGEPRALASRGAAAAAGSPG 98
           PA    + P+ +L     PP   A  D A+ +   G G   G P  LA  G        G
Sbjct: 91  PAADDDKGPQQLLLPPPPPPPPAAALDGAKADGLGGKGEPGGGPGELAPVGPDEKEKGAG 150

Query: 99  PGAAAARGAAGPGPGPPSG--GAATRSPLVKPPYSYIALITMAILQSPKKRLTLSEICEF 156
            G    +GA   G     G  G        KPP+SY ALI MAI QSP+KRLTL+ I EF
Sbjct: 151 AGGEEKKGAGEGGKDGEGGKEGEKKNGKYEKPPFSYNALIMMAIRQSPEKRLTLNGIYEF 210

Query: 157 ISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSF 216
           I   FPYYRE    WQNSIRHNLSLN CFVK+PR   +PGKGNYW LDP S D+F  G+ 
Sbjct: 211 IMKNFPYYRENKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTT 270

Query: 217 LRRRKR---------FKR-------------------QPLPPPHPHPHPHPELLLRGGAA 248
            + R+R         FKR                    P+ P     HP     L     
Sbjct: 271 GKLRRRSTTSRAKLAFKRGARLTSTGLTFMDRAGSLYWPMSPFLSLHHPRASSTLSYNGT 330

Query: 249 AAGDPGAFLP--GFAAYGAYGYGYGLALPAYGAPPPGPAPHPHPH-PHAFAFAAAAAAAP 305
            +  P   +P        + G  +  +  A G           P+  H    AA AA+ P
Sbjct: 331 TSAYPSHPMPYSSVLTQNSLGNNHSFS-TANGLSVDRLVNGEIPYATHHLTAAALAASVP 389

Query: 306 CQLSVPPGRAAAPPPGPPTASVFAGAGS-----APAPAPASGSGPGPGPAGLPAFLGAEL 360
           C LSVP   +      P + ++ AG  S      P P+  S S                 
Sbjct: 390 CGLSVP--CSGTYSLNPCSVNLLAGQTSYFFPHVPHPSMTSQSSTSMS------------ 435

Query: 361 GCAKAFYAASLSPPAAGTAAGLPTALLRQGLKTDAGGGAGG 401
             A+A  ++S SP A  T   LP   LR  L +   G +GG
Sbjct: 436 --ARA-ASSSTSPQAPST---LPCESLRPSLPSFTTGLSGG 470



 Score = 46.2 bits (108), Expect = 7e-05
 Identities = 48/159 (30%), Positives = 52/159 (32%), Gaps = 60/159 (37%)

Query: 281 PPGPAPHPHPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAPAP--- 337
           PP PAP P P                    PP +   PPP PP          AP P   
Sbjct: 58  PPPPAPQPPP--------------------PPQQQQPPPPPPP----------APQPPQT 87

Query: 338 --APASGSGPGPGPAGLPAFLGAELGCAKAFYAASLSPPAAGTAAGLPTALLRQGLKTDA 395
             APA+    GP    LP                   PP    AA L       G K D 
Sbjct: 88  RGAPAADDDKGPQQLLLP------------------PPPPPPPAAAL------DGAKADG 123

Query: 396 GGGAGGGGAGAGQ-RPSFSIDHIMGHGGGGAAPPGAGEG 433
            GG G  G G G+  P    +   G G GG    GAGEG
Sbjct: 124 LGGKGEPGGGPGELAPVGPDEKEKGAGAGGEEKKGAGEG 162



 Score = 42.4 bits (98), Expect = 0.001
 Identities = 26/72 (36%), Positives = 29/72 (40%), Gaps = 5/72 (6%)

Query: 275 PAYGAPPPGPAPHPHPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSA 334
           P    PPP P P P P     A AA     P QL +PP     PPP PP A++       
Sbjct: 69  PQQQQPPPPPPPAPQPPQTRGAPAADDDKGPQQLLLPP-----PPPPPPAAALDGAKADG 123

Query: 335 PAPAPASGSGPG 346
                  G GPG
Sbjct: 124 LGGKGEPGGGPG 135



 Score = 33.1 bits (74), Expect = 0.60
 Identities = 41/128 (32%), Positives = 44/128 (34%), Gaps = 33/128 (25%)

Query: 224 KRQPLPPPHPHPHPHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPPPG 283
           ++QP PPP P P P P+   RG  AA  D G                 L LP    PPP 
Sbjct: 71  QQQPPPPPPPAPQP-PQ--TRGAPAADDDKGP--------------QQLLLP----PPPP 109

Query: 284 PAPHPHPHPHAFAFAAAAAAAPCQLSVP---PGRAAAPPPGPPTASVFAGAGSAPAPAPA 340
           P P       A A   A A        P   PG  A  P GP      AGAG        
Sbjct: 110 PPP-------AAALDGAKADGLGGKGEPGGGPGELA--PVGPDEKEKGAGAGGEEKKGAG 160

Query: 341 SGSGPGPG 348
            G   G G
Sbjct: 161 EGGKDGEG 168


>gi|21618327 forkhead box I1 isoform a [Homo sapiens]
          Length = 378

 Score =  144 bits (363), Expect = 2e-34
 Identities = 86/218 (39%), Positives = 108/218 (49%), Gaps = 25/218 (11%)

Query: 125 LVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDC 184
           LV+PPYSY ALI MAI  +P KRLTLS+I ++++  FP+Y +    WQNSIRHNLSLNDC
Sbjct: 121 LVRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDC 180

Query: 185 FVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLPPPHPHPHPHPELLLR 244
           F K+PR+  +PGKGNYWTLDP    MFDNG+F R+RKR K               E  L 
Sbjct: 181 FKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR-KSDVSSSTASLALEKTESSLP 239

Query: 245 GGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPPPGPAPHPHPHPHAFAFAAAAAAA 304
             +    +P   L G +                G     P   P P P         + A
Sbjct: 240 VDSPKTTEPQDILDGASP---------------GGTTSSPEKRPSPPP---------SGA 275

Query: 305 PCQLSVPPGRAAAPPPGPPTASVFAGAGSAPAPAPASG 342
           PC  S      A    G PT+      G +P P+  +G
Sbjct: 276 PCLNSFLSSMTAYVSGGSPTSHPLVTPGLSPEPSDKTG 313


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.136    0.431 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,045,444
Number of Sequences: 37866
Number of extensions: 2481490
Number of successful extensions: 45939
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 1875
Number of HSP's that attempted gapping in prelim test: 17610
Number of HSP's gapped (non-prelim): 18530
length of query: 495
length of database: 18,247,518
effective HSP length: 106
effective length of query: 389
effective length of database: 14,233,722
effective search space: 5536917858
effective search space used: 5536917858
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.