Guide to the Human Genome
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Name: TFDP2 Sequence: fasta or formatted (386aa) NCBI GI: 5454112
Description:

transcription factor Dp-2 (E2F dimerization partner 2)

Referenced in:

E2F Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         24           2
 C cysteine            1.8          7           1
 D aspartate           5.7         22           2
 E glutamate           7.5         29           2
 F phenylalanine       3.4         13           1
 G glycine             5.2         20           1
 H histidine           1.6          6           1
 I isoleucine          6.2         24           3
 K lysine              6.7         26           2
 L leucine             9.1         35           3
 M methionine          1.8          7           1
 N asparagine          6.2         24           2
 P proline             3.9         15           2
 Q glutamine           6.5         25           2
 R arginine            4.9         19           3
 S serine             11.1         43           3
 T threonine           5.7         22           2
 V valine              4.1         16           1
 W tryptophan          0.8          3           1
 Y tyrosine            1.6          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transcription factor Dp-2 (E2F dimerization partner 2... 
TFDP1                 0.558   transcription factor Dp-1 
TFDP3                 0.413   transcription factor Dp family, member 3 
E2F4                  0.024   E2F transcription factor 4 
E2F5                  0.019   E2F transcription factor 5 isoform 2 
E2F5                  0.019   E2F transcription factor 5 isoform 1 
E2F3                  0.016   E2F transcription factor 3 
E2F1                  0.012   E2F transcription factor 1 
IVL                   0.012   involucrin 
E2F7                  0.012   E2F transcription factor 7 
MYH11                 0.012   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.012   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.012   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.012   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
SMC1A                 0.011   structural maintenance of chromosomes 1A 
MAP7D2                0.011   MAP7 domain containing 2 
E2F8                  0.011   E2F family member 8 
CEP350                0.011   centrosome-associated protein 350 
CCDC19                0.011   nasopharyngeal epithelium specific protein 1 
GCOM1                 0.009   GRINL1A combined protein isoform 2 
GCOM1                 0.009   GRINL1A combined protein isoform 1 
GCOM1                 0.009   GRINL1A combined protein isoform 8 
GCOM1                 0.009   GRINL1A upstream protein isoform 7 
E2F2                  0.009   E2F transcription factor 2 
E2F6                  0.009   E2F transcription factor 6 
MNS1                  0.009   meiosis-specific nuclear structural 1 
ESF1                  0.009   ABT1-associated protein 
BRD2                  0.009   bromodomain containing 2 
BRD2                  0.009   bromodomain containing 2 
HAP1                  0.009   huntingtin-associated protein 1 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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