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Search of human proteins with 55749644
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|55749644 UHRF1 (ICBP90) binding protein 1-like isoform a
[Homo sapiens]
(1464 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|55749644 UHRF1 (ICBP90) binding protein 1-like isoform a [Hom... 2913 0.0
gi|55749659 UHRF1 (ICBP90) binding protein 1-like isoform b [Hom... 1037 0.0
gi|134152667 ICBP90 binding protein 1 [Homo sapiens] 1010 0.0
gi|35493713 vacuolar protein sorting 13B isoform 5 [Homo sapiens] 54 1e-06
gi|35493701 vacuolar protein sorting 13B isoform 1 [Homo sapiens] 54 1e-06
gi|119874215 vacuolar protein sorting 13B isoform 4 [Homo sapiens] 54 1e-06
gi|35493725 vacuolar protein sorting 13B isoform 3 [Homo sapiens] 54 1e-06
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 45 4e-04
gi|54607141 vacuolar protein sorting 13D isoform 2 [Homo sapiens] 43 0.002
gi|54607139 vacuolar protein sorting 13D isoform 1 [Homo sapiens] 43 0.002
gi|239745085 PREDICTED: similar to Golgin subfamily A member 8-l... 37 0.11
gi|239745083 PREDICTED: similar to Golgin subfamily A member 8-l... 37 0.11
gi|239745081 PREDICTED: similar to Golgin subfamily A member 8-l... 37 0.11
gi|63252863 BTB (POZ) domain containing 12 [Homo sapiens] 37 0.11
gi|15619008 vacuolar protein sorting 13A isoform B [Homo sapiens] 37 0.14
gi|66346676 vacuolar protein sorting 13A isoform D [Homo sapiens] 37 0.14
gi|66346674 vacuolar protein sorting 13A isoform A [Homo sapiens] 37 0.14
gi|66346672 vacuolar protein sorting 13A isoform C [Homo sapiens] 37 0.14
gi|42544121 vacuolar protein sorting 13C protein isoform 1A [Hom... 35 0.69
gi|66348091 vacuolar protein sorting 13C protein isoform 1B [Hom... 35 0.69
gi|239745087 PREDICTED: similar to Golgin subfamily A member 8-l... 34 0.91
gi|118197272 ATG2 autophagy related 2 homolog B [Homo sapiens] 34 0.91
gi|66347845 vacuolar protein sorting 13C protein isoform 2B [Hom... 34 0.91
gi|66347828 vacuolar protein sorting 13C protein isoform 2A [Hom... 34 0.91
gi|239745132 PREDICTED: similar to Golgin subfamily A member 8-l... 34 1.2
gi|239745130 PREDICTED: similar to Golgin subfamily A member 8-l... 34 1.2
gi|33620745 pre-mRNA cleavage complex II protein Pcf11 [Homo sap... 34 1.2
gi|16975496 cortactin binding protein 2 [Homo sapiens] 34 1.2
gi|116686122 kinesin family member 4 [Homo sapiens] 33 1.5
gi|151301098 zinc finger, DBF-type containing 2 [Homo sapiens] 33 1.5
>gi|55749644 UHRF1 (ICBP90) binding protein 1-like isoform a [Homo
sapiens]
Length = 1464
Score = 2913 bits (7552), Expect = 0.0
Identities = 1464/1464 (100%), Positives = 1464/1464 (100%)
Query: 1 MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAINK 60
MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAINK
Sbjct: 1 MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAINK 60
Query: 61 VFCNKASIRIPWTKLKTHPICLSLDKVIMEMSTCEEPRSPNGPSPIATASGQSEYGFAEK 120
VFCNKASIRIPWTKLKTHPICLSLDKVIMEMSTCEEPRSPNGPSPIATASGQSEYGFAEK
Sbjct: 61 VFCNKASIRIPWTKLKTHPICLSLDKVIMEMSTCEEPRSPNGPSPIATASGQSEYGFAEK 120
Query: 121 VVEGISVSVNSIVIRIGAKAFNASFELSQLRIYSVNAHWEHGDLRFTRIQDPQRGEVLTF 180
VVEGISVSVNSIVIRIGAKAFNASFELSQLRIYSVNAHWEHGDLRFTRIQDPQRGEVLTF
Sbjct: 121 VVEGISVSVNSIVIRIGAKAFNASFELSQLRIYSVNAHWEHGDLRFTRIQDPQRGEVLTF 180
Query: 181 KEINWQMIRIEADATQSSHLEIMCAPVRLITNQSKIRVTLKRRLKDCNVIATKLVLILDD 240
KEINWQMIRIEADATQSSHLEIMCAPVRLITNQSKIRVTLKRRLKDCNVIATKLVLILDD
Sbjct: 181 KEINWQMIRIEADATQSSHLEIMCAPVRLITNQSKIRVTLKRRLKDCNVIATKLVLILDD 240
Query: 241 LLWVLTDSQLKAMVQYAKSLSEAIEKSTEQRKSMAPEPTQSSTVVASAQQVKTTQTSNAP 300
LLWVLTDSQLKAMVQYAKSLSEAIEKSTEQRKSMAPEPTQSSTVVASAQQVKTTQTSNAP
Sbjct: 241 LLWVLTDSQLKAMVQYAKSLSEAIEKSTEQRKSMAPEPTQSSTVVASAQQVKTTQTSNAP 300
Query: 301 DVNDAIVKLFNDFDVKETSHHLVISHLDLHICDDIHAKEKESNRRITGGAMQLSFTQLTI 360
DVNDAIVKLFNDFDVKETSHHLVISHLDLHICDDIHAKEKESNRRITGGAMQLSFTQLTI
Sbjct: 301 DVNDAIVKLFNDFDVKETSHHLVISHLDLHICDDIHAKEKESNRRITGGAMQLSFTQLTI 360
Query: 361 DYYPYHKAGDSCNHWMYFSDATKTKNGWANELLHEFECNVEMLKQAVKDHNVGSPPKSPT 420
DYYPYHKAGDSCNHWMYFSDATKTKNGWANELLHEFECNVEMLKQAVKDHNVGSPPKSPT
Sbjct: 361 DYYPYHKAGDSCNHWMYFSDATKTKNGWANELLHEFECNVEMLKQAVKDHNVGSPPKSPT 420
Query: 421 HASPQHTQTEKDYPLKGTCRTPSVLSQQSKAKLMSSSVVVRLADFNIYQVSTAEQCRSSP 480
HASPQHTQTEKDYPLKGTCRTPSVLSQQSKAKLMSSSVVVRLADFNIYQVSTAEQCRSSP
Sbjct: 421 HASPQHTQTEKDYPLKGTCRTPSVLSQQSKAKLMSSSVVVRLADFNIYQVSTAEQCRSSP 480
Query: 481 KSMICCNKKSLYLPQEMSAVYIEFTEYYYPDGKDFPIPSPNLYSQLNALQFTVDERSILW 540
KSMICCNKKSLYLPQEMSAVYIEFTEYYYPDGKDFPIPSPNLYSQLNALQFTVDERSILW
Sbjct: 481 KSMICCNKKSLYLPQEMSAVYIEFTEYYYPDGKDFPIPSPNLYSQLNALQFTVDERSILW 540
Query: 541 LNQFLLDLKQSLNQFMAVYKLNDNSKSDEHVDVRVDGLMLKFVIPSEVKSECHQDQPRAI 600
LNQFLLDLKQSLNQFMAVYKLNDNSKSDEHVDVRVDGLMLKFVIPSEVKSECHQDQPRAI
Sbjct: 541 LNQFLLDLKQSLNQFMAVYKLNDNSKSDEHVDVRVDGLMLKFVIPSEVKSECHQDQPRAI 600
Query: 601 SIQSSEMIATNTRHCPNCRHSDLEALFQDFKDCDFFSKTYTSFPKSCDNFNLLHPIFQRH 660
SIQSSEMIATNTRHCPNCRHSDLEALFQDFKDCDFFSKTYTSFPKSCDNFNLLHPIFQRH
Sbjct: 601 SIQSSEMIATNTRHCPNCRHSDLEALFQDFKDCDFFSKTYTSFPKSCDNFNLLHPIFQRH 660
Query: 661 AHEQDTKMHEIYKGNITPQLNKNTLKTSAATDVWAVYFSQFWIDYEGMKSGKGRPISFVD 720
AHEQDTKMHEIYKGNITPQLNKNTLKTSAATDVWAVYFSQFWIDYEGMKSGKGRPISFVD
Sbjct: 661 AHEQDTKMHEIYKGNITPQLNKNTLKTSAATDVWAVYFSQFWIDYEGMKSGKGRPISFVD 720
Query: 721 SFPLSIWICQPTRYAESQKEPQTCNQVSLNTSQSESSDLAGRLKRKKLLKEYYSTESEPL 780
SFPLSIWICQPTRYAESQKEPQTCNQVSLNTSQSESSDLAGRLKRKKLLKEYYSTESEPL
Sbjct: 721 SFPLSIWICQPTRYAESQKEPQTCNQVSLNTSQSESSDLAGRLKRKKLLKEYYSTESEPL 780
Query: 781 TNGGQKPSSSDTFFRFSPSSSEADIHLLVHVHKHVSMQINHYQYLLLLFLHESLILLSEN 840
TNGGQKPSSSDTFFRFSPSSSEADIHLLVHVHKHVSMQINHYQYLLLLFLHESLILLSEN
Sbjct: 781 TNGGQKPSSSDTFFRFSPSSSEADIHLLVHVHKHVSMQINHYQYLLLLFLHESLILLSEN 840
Query: 841 LRKDVEAVTGSPASQTSICIGILLRSAELALLLHPVDQANTLKSPVSESVSPVVPDYLPT 900
LRKDVEAVTGSPASQTSICIGILLRSAELALLLHPVDQANTLKSPVSESVSPVVPDYLPT
Sbjct: 841 LRKDVEAVTGSPASQTSICIGILLRSAELALLLHPVDQANTLKSPVSESVSPVVPDYLPT 900
Query: 901 ENGDFLSSKRKQISRDINRIRSVTVNHMSDNRSMSVDLSHIPLKDPLLFKSASDTNLQKG 960
ENGDFLSSKRKQISRDINRIRSVTVNHMSDNRSMSVDLSHIPLKDPLLFKSASDTNLQKG
Sbjct: 901 ENGDFLSSKRKQISRDINRIRSVTVNHMSDNRSMSVDLSHIPLKDPLLFKSASDTNLQKG 960
Query: 961 ISFMDYLSDKHLGKISEDESSGLVYKSGSGEIGSETSDKKDSFYTDSSSILNYREDSNIL 1020
ISFMDYLSDKHLGKISEDESSGLVYKSGSGEIGSETSDKKDSFYTDSSSILNYREDSNIL
Sbjct: 961 ISFMDYLSDKHLGKISEDESSGLVYKSGSGEIGSETSDKKDSFYTDSSSILNYREDSNIL 1020
Query: 1021 SFDSDGNQNILSSTLTSKGNETIESIFKAEDLLPEAASLSENLDISKEETPPVRTLKSQS 1080
SFDSDGNQNILSSTLTSKGNETIESIFKAEDLLPEAASLSENLDISKEETPPVRTLKSQS
Sbjct: 1021 SFDSDGNQNILSSTLTSKGNETIESIFKAEDLLPEAASLSENLDISKEETPPVRTLKSQS 1080
Query: 1081 SLSGKPKERCPPNLAPLCVSYKNMKRSSSQMSLDTISLDSMILEEQLLESDGSDSHMFLE 1140
SLSGKPKERCPPNLAPLCVSYKNMKRSSSQMSLDTISLDSMILEEQLLESDGSDSHMFLE
Sbjct: 1081 SLSGKPKERCPPNLAPLCVSYKNMKRSSSQMSLDTISLDSMILEEQLLESDGSDSHMFLE 1140
Query: 1141 KGNKKNSTTNYRGTAESVNAGANLQNYGETSPDAISTNSEGAQENHDDLMSVVVFKITGV 1200
KGNKKNSTTNYRGTAESVNAGANLQNYGETSPDAISTNSEGAQENHDDLMSVVVFKITGV
Sbjct: 1141 KGNKKNSTTNYRGTAESVNAGANLQNYGETSPDAISTNSEGAQENHDDLMSVVVFKITGV 1200
Query: 1201 NGEIDIRGEDTEICLQVNQVTPDQLGNISLRHYLCNRPVGSDQKAVIHSKSSPEISLRFE 1260
NGEIDIRGEDTEICLQVNQVTPDQLGNISLRHYLCNRPVGSDQKAVIHSKSSPEISLRFE
Sbjct: 1201 NGEIDIRGEDTEICLQVNQVTPDQLGNISLRHYLCNRPVGSDQKAVIHSKSSPEISLRFE 1260
Query: 1261 SGPGAVIHSLLAEKNGFLQCHIENFSTEFLTSSLMNIQHFLEDETVATVMPMKIQVSNTK 1320
SGPGAVIHSLLAEKNGFLQCHIENFSTEFLTSSLMNIQHFLEDETVATVMPMKIQVSNTK
Sbjct: 1261 SGPGAVIHSLLAEKNGFLQCHIENFSTEFLTSSLMNIQHFLEDETVATVMPMKIQVSNTK 1320
Query: 1321 INLKDDSPRSSTVSLEPAPVTVHIDHLVVERSDDGSFHIRDSHMLNTGNDLKENVKSDSV 1380
INLKDDSPRSSTVSLEPAPVTVHIDHLVVERSDDGSFHIRDSHMLNTGNDLKENVKSDSV
Sbjct: 1321 INLKDDSPRSSTVSLEPAPVTVHIDHLVVERSDDGSFHIRDSHMLNTGNDLKENVKSDSV 1380
Query: 1381 LLTSGKYDLKKQRSVTQATQTSPGVPWPSQSANFPEFSFDFTREQLMEENESLKQELAKA 1440
LLTSGKYDLKKQRSVTQATQTSPGVPWPSQSANFPEFSFDFTREQLMEENESLKQELAKA
Sbjct: 1381 LLTSGKYDLKKQRSVTQATQTSPGVPWPSQSANFPEFSFDFTREQLMEENESLKQELAKA 1440
Query: 1441 KMALAEAHLEKDALLHHIKKMTVE 1464
KMALAEAHLEKDALLHHIKKMTVE
Sbjct: 1441 KMALAEAHLEKDALLHHIKKMTVE 1464
>gi|55749659 UHRF1 (ICBP90) binding protein 1-like isoform b [Homo
sapiens]
Length = 522
Score = 1037 bits (2682), Expect = 0.0
Identities = 516/516 (100%), Positives = 516/516 (100%)
Query: 1 MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAINK 60
MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAINK
Sbjct: 1 MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAINK 60
Query: 61 VFCNKASIRIPWTKLKTHPICLSLDKVIMEMSTCEEPRSPNGPSPIATASGQSEYGFAEK 120
VFCNKASIRIPWTKLKTHPICLSLDKVIMEMSTCEEPRSPNGPSPIATASGQSEYGFAEK
Sbjct: 61 VFCNKASIRIPWTKLKTHPICLSLDKVIMEMSTCEEPRSPNGPSPIATASGQSEYGFAEK 120
Query: 121 VVEGISVSVNSIVIRIGAKAFNASFELSQLRIYSVNAHWEHGDLRFTRIQDPQRGEVLTF 180
VVEGISVSVNSIVIRIGAKAFNASFELSQLRIYSVNAHWEHGDLRFTRIQDPQRGEVLTF
Sbjct: 121 VVEGISVSVNSIVIRIGAKAFNASFELSQLRIYSVNAHWEHGDLRFTRIQDPQRGEVLTF 180
Query: 181 KEINWQMIRIEADATQSSHLEIMCAPVRLITNQSKIRVTLKRRLKDCNVIATKLVLILDD 240
KEINWQMIRIEADATQSSHLEIMCAPVRLITNQSKIRVTLKRRLKDCNVIATKLVLILDD
Sbjct: 181 KEINWQMIRIEADATQSSHLEIMCAPVRLITNQSKIRVTLKRRLKDCNVIATKLVLILDD 240
Query: 241 LLWVLTDSQLKAMVQYAKSLSEAIEKSTEQRKSMAPEPTQSSTVVASAQQVKTTQTSNAP 300
LLWVLTDSQLKAMVQYAKSLSEAIEKSTEQRKSMAPEPTQSSTVVASAQQVKTTQTSNAP
Sbjct: 241 LLWVLTDSQLKAMVQYAKSLSEAIEKSTEQRKSMAPEPTQSSTVVASAQQVKTTQTSNAP 300
Query: 301 DVNDAIVKLFNDFDVKETSHHLVISHLDLHICDDIHAKEKESNRRITGGAMQLSFTQLTI 360
DVNDAIVKLFNDFDVKETSHHLVISHLDLHICDDIHAKEKESNRRITGGAMQLSFTQLTI
Sbjct: 301 DVNDAIVKLFNDFDVKETSHHLVISHLDLHICDDIHAKEKESNRRITGGAMQLSFTQLTI 360
Query: 361 DYYPYHKAGDSCNHWMYFSDATKTKNGWANELLHEFECNVEMLKQAVKDHNVGSPPKSPT 420
DYYPYHKAGDSCNHWMYFSDATKTKNGWANELLHEFECNVEMLKQAVKDHNVGSPPKSPT
Sbjct: 361 DYYPYHKAGDSCNHWMYFSDATKTKNGWANELLHEFECNVEMLKQAVKDHNVGSPPKSPT 420
Query: 421 HASPQHTQTEKDYPLKGTCRTPSVLSQQSKAKLMSSSVVVRLADFNIYQVSTAEQCRSSP 480
HASPQHTQTEKDYPLKGTCRTPSVLSQQSKAKLMSSSVVVRLADFNIYQVSTAEQCRSSP
Sbjct: 421 HASPQHTQTEKDYPLKGTCRTPSVLSQQSKAKLMSSSVVVRLADFNIYQVSTAEQCRSSP 480
Query: 481 KSMICCNKKSLYLPQEMSAVYIEFTEYYYPDGKDFP 516
KSMICCNKKSLYLPQEMSAVYIEFTEYYYPDGKDFP
Sbjct: 481 KSMICCNKKSLYLPQEMSAVYIEFTEYYYPDGKDFP 516
>gi|134152667 ICBP90 binding protein 1 [Homo sapiens]
Length = 1440
Score = 1010 bits (2611), Expect = 0.0
Identities = 628/1515 (41%), Positives = 867/1515 (57%), Gaps = 137/1515 (9%)
Query: 1 MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAINK 60
MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEG+L NLELDEEVLQN+L+LPTWLAI +
Sbjct: 1 MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGQLTNLELDEEVLQNVLELPTWLAITR 60
Query: 61 VFCNKASIRIPWTKLKTHPICLSLDKVIMEMSTCEEPRSPNGPSPIATASGQSEYGFAEK 120
V+CN+ASIRI WTKLKTHPICL LDKV +EM TCE+PR PNG SPIA ASGQSEYGFAEK
Sbjct: 61 VYCNRASIRIQWTKLKTHPICLCLDKVEVEMKTCEDPRPPNGQSPIALASGQSEYGFAEK 120
Query: 121 VVEGISVSVNSIVIRIGAKAFNASFELSQLRIYSVNAHWEHGDLRFTRIQDPQRGEVLTF 180
VVEG+ + VNSI I+I +KAF+ASFEL QL+ YSVN +W+ DLR TRI DP RGEVLTF
Sbjct: 121 VVEGMFIIVNSITIKIHSKAFHASFELWQLQGYSVNPNWQQSDLRLTRITDPCRGEVLTF 180
Query: 181 KEINWQMIRIEADATQSSHLEIMCAPVRLITNQSKIRVTLKRRLKDCNVIATKLVLILDD 240
KEI WQ +RIEADAT + + + P+RLITNQ +I++ LKRR KDCNVI++KL+ +LDD
Sbjct: 181 KEITWQTLRIEADATDNGDQDPVTTPLRLITNQGRIQIALKRRTKDCNVISSKLMFLLDD 240
Query: 241 LLWVLTDSQLKAMVQYAKSLSEAIEKSTEQRKSMAPEPTQSSTVVASAQQVKTT----QT 296
LLWVLTDSQLKAM++YA+SLSEA+EKS QRKS+APEP Q + SAQQ
Sbjct: 241 LLWVLTDSQLKAMMKYAESLSEAMEKSAHQRKSLAPEPVQITPPAPSAQQSWAQAFGGSQ 300
Query: 297 SNAPDVNDAIVKLFNDFDVKETSHHLVISHLDLHICDDIHAKEK-ESNRRITGGAMQLSF 355
N+ + + + F FDVKE+S+HL+IS LDLHICDD ++E S R+ GGAMQL+F
Sbjct: 301 GNSNSSSSRLSQYFEKFDVKESSYHLLISRLDLHICDDSQSREPGVSANRLMGGAMQLTF 360
Query: 356 TQLTIDYYPYHKAGDSCNHWMYFSDATKTKNGWANELLHEFECNVEMLKQAV-------- 407
++ DYYP+H AGDSC HW+ +A +T+ WA +L+ EF+ +E +
Sbjct: 361 RKMAFDYYPFHWAGDSCKHWVRHCEAMETRGQWAQKLVMEFQSKMEKWHEETGLKPPWHL 420
Query: 408 --------KDHNVGSPPKSPTHASPQHTQTEKDYPLKGTCRTPSVLSQQSKAKLMSSSVV 459
K ++ SP K+P SP + P + +L SS +V
Sbjct: 421 GVDSLFRRKADSLSSPRKNPLERSPSQGRQPAFQP-------------PAWNRLRSSCMV 467
Query: 460 VRLADFNIYQVSTAEQCRSSPKSMICCNKKSLYLPQEMSAVYIEFTEYYYPDGKDFPIPS 519
VR+ D +I+QVSTA Q P +++ C++K LP ++SA++IEFTEYY+PD ++ P+P
Sbjct: 468 VRVDDLDIHQVSTAGQPSKKPSTLLSCSRKLHNLPTQVSAIHIEFTEYYFPDNQELPVPC 527
Query: 520 PNLYSQLNALQFTVDERSILWLNQFLLDLKQSLNQFMAVYKLNDNSKSDEHVDVRVDGLM 579
PNLY QLN L FT+D S+LW N F LDL +SL QF A+YKL D+S+ DEH+D+R+D
Sbjct: 528 PNLYIQLNGLTFTMDPVSLLWGNLFCLDLYRSLEQFKAIYKLEDSSQKDEHLDIRLDAFW 587
Query: 580 LKFVIPSEVKSECHQDQPRAISIQSSEMIATNTRHCPNCRHSDLEALFQDFKDCDFFSKT 639
LK P E + +P+A+ +S MIATNTRH P+C SDL++LF+ F +FF
Sbjct: 588 LKVSFPLEKRERAELHRPQALVFSASGMIATNTRHAPHCSCSDLQSLFRGFAAAEFFHSN 647
Query: 640 YTSFPKSCDNFNLLHPIFQRHAHEQDTKMHEIYKGNITPQLNKNTLKTSAATDVWAVYFS 699
Y FPK F+LLH +F HA + D+ + + + PQ + A+ D+W+V+F+
Sbjct: 648 YDHFPKVPGGFSLLHMLFLHHAFQMDSCLPQ--PNTLPPQ------RPKASWDLWSVHFT 699
Query: 700 QFWIDYEGMKSGKGRPISFVDSFPLSIWICQPTRYAESQ-KEPQTCNQVSLNTSQSESSD 758
Q +D+EG ++ KG ++FV FPLSIW C P R+ ++Q ++ ++ L S S S
Sbjct: 700 QISLDFEGTENFKGHTLNFVAPFPLSIWACLPLRWQQAQARKLLLASEGRLKPSASFGSP 759
Query: 759 LAG-----------RLKRKKLLKEYYS-TESEPLTNGGQKPSSSDTFFRFSPSSSEADIH 806
+ R K + LK TE + G S D + AD+H
Sbjct: 760 VQSEALAPDSMSHPRSKTEHDLKSLSGLTEVMEILKEGS--SGMDNKGPLTELEDVADVH 817
Query: 807 LLVHVHKHVSMQINHYQYLLLLFLHESLILLSENLRKDVEAVTGSPASQTSICIGILLRS 866
+LVH HV ++++HYQYL LL L E L L E L KD E++TGSP + CIG+L S
Sbjct: 818 MLVHSPAHVRVRLDHYQYLALLRLKEVLQRLQEQLTKDTESMTGSPLQNQTACIGVLFPS 877
Query: 867 AELALLLHPVDQANTLKSPVSESVSPVVPDYLPTENGDFLSSKRKQISRDINRIRSVTVN 926
AE+ALL+HP A S S+S S V + P+E+ + S + V
Sbjct: 878 AEVALLMHPAPGAVDADSAGSDSTSLVDSELSPSEDRELKSDASS--DQGPASPEKVLEE 935
Query: 927 HMSDNRSMSVDLSHI--PLKD--PLLFKSASDTNLQKGISFMDYLSDKHLGKISEDESSG 982
+N+ +S + H L+D PL + A KG ++ L K L + ++ SS
Sbjct: 936 SSIENQDVSQERPHSNGELQDSGPLAQQLAG-----KGHEAVESLQAKKLSR-TQASSSP 989
Query: 983 LVYKSGSGEIGSETSDKKDSFYTDSSSILNYREDSNILSFDSDGNQNILSSTLTSKGNET 1042
K +G ET+ +I + LSS + + T
Sbjct: 990 AALKPPAGR---ETAVNGQGELIPLKNI-----------------EGELSSAIHMTKDAT 1029
Query: 1043 IESIFKAEDLLPEAASLSENLDISKEETPPVRTLKSQSSL--SGKPKERCPPNL-APLC- 1098
E++ DL EA SL+++ S T+ SL + +P + + AP+
Sbjct: 1030 KEALHATMDLTKEAVSLTKDA-FSLGRDRMTSTMHKMLSLPPAKEPMAKTDEGVAAPVSG 1088
Query: 1099 ----VSYKNMKRSSSQMSLDTISLDSMILEEQL-LESDGSDSH-MFLEKGNKKNSTTNYR 1152
+ + +MKR+ SQ S D +SLDS E+++ ++SDGSDS M LE + S
Sbjct: 1089 GAARLRFFSMKRTVSQQSFDGVSLDSSGPEDRISVDSDGSDSFVMLLESESGPESVPPGS 1148
Query: 1153 GTAESVNAGAN----LQNYGETSPDAISTNSEGAQENHDDLMSVVVFKITGVNGEIDIRG 1208
+ S NAG + NYG+ SP A S+ S ++ +SV+V K+ V+ I++RG
Sbjct: 1149 LSNVSDNAGVQGSPLVNNYGQGSPAANSSVSPSGEDLIFHPVSVLVLKVNEVSFGIEVRG 1208
Query: 1209 EDTEICLQVNQVTPDQLGNISLRHYL---CNRPVGSDQKAVIHSKSSPEISLRFESGPGA 1265
ED + LQ ++T QLG + L +L C + + P + LRFE GPGA
Sbjct: 1209 EDLTVALQAEELTLQQLGTVGLWQFLHGQCPGTCFQESSTLKTGHIRPAVGLRFEVGPGA 1268
Query: 1266 VIHSLLAEKNGFLQCHIENFSTEFLTSSLMNIQHFLEDETVATVMPMKIQVSNTKINLKD 1325
+HS LA +NGFL + E LTS L + FLEDE + V+PM+I++ N+ I LKD
Sbjct: 1269 AVHSPLASQNGFLHLLLHGCDLELLTSVLSGLGPFLEDEEIPVVVPMQIELLNSSITLKD 1328
Query: 1326 DSPRSSTVSLEPAPVTVHIDHLVVERSDDGSFHIRDSHMLNTGNDLKENVKSDSVLLTSG 1385
D P S P P+T+ ++H+V++RSDDG FHI ++ S VL +
Sbjct: 1329 DIPPIYPTSPGPIPITLAMEHVVLKRSDDGVFHI---------GAAAQDKPSAEVLKSEK 1379
Query: 1386 KYDLKKQRSVTQATQTSPGVPWPSQSANFPEFSFDFTREQLMEENESLKQELAKAKMALA 1445
+ K+Q + + EQ ++E L++EL + K ALA
Sbjct: 1380 RQPPKEQVFLVPTGEVF---------------------EQQVKELPILQKELIETKQALA 1418
Query: 1446 EAHLEKDALLHHIKK 1460
A+ +K+ LL I+K
Sbjct: 1419 NANQDKEKLLQEIRK 1433
>gi|35493713 vacuolar protein sorting 13B isoform 5 [Homo sapiens]
Length = 4022
Score = 53.5 bits (127), Expect = 1e-06
Identities = 38/179 (21%), Positives = 79/179 (44%), Gaps = 29/179 (16%)
Query: 9 ILKHLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAINKVFCNKASI 68
++ +++R+ KNL P + LS G+ L LEL +VL+ L LP + ++ I
Sbjct: 10 LMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSGHI--HELRI 67
Query: 69 RIPWTKLKTHPICLSLD--KVIMEM------------------STCEEPRSPNGPSPIAT 108
+PWTKL + P+ ++++ + I+++ ST E +S P +
Sbjct: 68 HVPWTKLGSEPVVITINTMECILKLKDGIQDDHESCGSNSTNRSTAESTKSSIKPRRMQQ 127
Query: 109 ASGQSE-------YGFAEKVVEGISVSVNSIVIRIGAKAFNASFELSQLRIYSVNAHWE 160
A+ +VV +++ +N+++++ S ++ Y+V W+
Sbjct: 128 AAPTDPDLPPGYVQSLIRRVVNNVNIVINNLILKYVEDDIVLSVNITSAECYTVGELWD 186
>gi|35493701 vacuolar protein sorting 13B isoform 1 [Homo sapiens]
Length = 3997
Score = 53.5 bits (127), Expect = 1e-06
Identities = 38/179 (21%), Positives = 79/179 (44%), Gaps = 29/179 (16%)
Query: 9 ILKHLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAINKVFCNKASI 68
++ +++R+ KNL P + LS G+ L LEL +VL+ L LP + ++ I
Sbjct: 10 LMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSGHI--HELRI 67
Query: 69 RIPWTKLKTHPICLSLD--KVIMEM------------------STCEEPRSPNGPSPIAT 108
+PWTKL + P+ ++++ + I+++ ST E +S P +
Sbjct: 68 HVPWTKLGSEPVVITINTMECILKLKDGIQDDHESCGSNSTNRSTAESTKSSIKPRRMQQ 127
Query: 109 ASGQSE-------YGFAEKVVEGISVSVNSIVIRIGAKAFNASFELSQLRIYSVNAHWE 160
A+ +VV +++ +N+++++ S ++ Y+V W+
Sbjct: 128 AAPTDPDLPPGYVQSLIRRVVNNVNIVINNLILKYVEDDIVLSVNITSAECYTVGELWD 186
>gi|119874215 vacuolar protein sorting 13B isoform 4 [Homo sapiens]
Length = 415
Score = 53.5 bits (127), Expect = 1e-06
Identities = 38/179 (21%), Positives = 79/179 (44%), Gaps = 29/179 (16%)
Query: 9 ILKHLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAINKVFCNKASI 68
++ +++R+ KNL P + LS G+ L LEL +VL+ L LP + ++ I
Sbjct: 10 LMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSGHI--HELRI 67
Query: 69 RIPWTKLKTHPICLSLD--KVIMEM------------------STCEEPRSPNGPSPIAT 108
+PWTKL + P+ ++++ + I+++ ST E +S P +
Sbjct: 68 HVPWTKLGSEPVVITINTMECILKLKDGIQDDHESCGSNSTNRSTAESTKSSIKPRRMQQ 127
Query: 109 ASGQSE-------YGFAEKVVEGISVSVNSIVIRIGAKAFNASFELSQLRIYSVNAHWE 160
A+ +VV +++ +N+++++ S ++ Y+V W+
Sbjct: 128 AAPTDPDLPPGYVQSLIRRVVNNVNIVINNLILKYVEDDIVLSVNITSAECYTVGELWD 186
>gi|35493725 vacuolar protein sorting 13B isoform 3 [Homo sapiens]
Length = 863
Score = 53.5 bits (127), Expect = 1e-06
Identities = 38/179 (21%), Positives = 79/179 (44%), Gaps = 29/179 (16%)
Query: 9 ILKHLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAINKVFCNKASI 68
++ +++R+ KNL P + LS G+ L LEL +VL+ L LP + ++ I
Sbjct: 10 LMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSGHI--HELRI 67
Query: 69 RIPWTKLKTHPICLSLD--KVIMEM------------------STCEEPRSPNGPSPIAT 108
+PWTKL + P+ ++++ + I+++ ST E +S P +
Sbjct: 68 HVPWTKLGSEPVVITINTMECILKLKDGIQDDHESCGSNSTNRSTAESTKSSIKPRRMQQ 127
Query: 109 ASGQSE-------YGFAEKVVEGISVSVNSIVIRIGAKAFNASFELSQLRIYSVNAHWE 160
A+ +VV +++ +N+++++ S ++ Y+V W+
Sbjct: 128 AAPTDPDLPPGYVQSLIRRVVNNVNIVINNLILKYVEDDIVLSVNITSAECYTVGELWD 186
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 45.4 bits (106), Expect = 4e-04
Identities = 71/293 (24%), Positives = 118/293 (40%), Gaps = 15/293 (5%)
Query: 900 TENGDFLSSKRKQISRDINRIRSVTVNHMSDNRSMSVDLSHIPLKDPLLFKSASDTNLQK 959
+ + D S S D + S N SD+ S D S D ++SD++
Sbjct: 549 SSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSS 608
Query: 960 GISFMDYLSDKHLGKI----SEDESSGLVYKSGSGEI-GSETSDKKDSFYTDSSSILNYR 1014
S SD K SE +SS KS S + S++SD DS +DSS+ N
Sbjct: 609 DSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDS--SDSSNSSNSS 666
Query: 1015 EDSNILSFDSDGNQNILSSTLTSKGNETIESIFKAEDLLPEAASLSENLDISKEETPPVR 1074
+ S+ S DS + + S+ +S +++ +S +E +S S++ D S
Sbjct: 667 DSSD--SSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSS----N 720
Query: 1075 TLKSQSSLSGKPKERCPPNLAPLCVSYKNMKRSSSQMSLDTISLDSMILEEQLLESDGSD 1134
+ S S S N + S + S S S D S +S + SD SD
Sbjct: 721 SNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSD--SSNSSDSSDSSDSSDSSD 778
Query: 1135 SHMFLEKGNKKNSTTNYRGTAESVNAGANLQNYGETSPDAISTNSEGAQENHD 1187
S + + NS+ + + S ++ ++ + S D+ S+NS + + D
Sbjct: 779 SSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSD 831
Score = 43.5 bits (101), Expect = 0.001
Identities = 65/293 (22%), Positives = 110/293 (37%), Gaps = 14/293 (4%)
Query: 900 TENGDFLSSKRKQISRDINRIRSVTVNHMSDNRSMSVDLSHIPLKDPLLFKSASDTNLQK 959
+++ D S S D + + + S N S S D S D S+ +N
Sbjct: 666 SDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSS--DSSDSSNSNS 723
Query: 960 GISFMDYLSDKHLGKISEDESSGLVYKSGSGEIGSETSDKKDSFYTDSSSILNYREDSNI 1019
S SD S D S S S++SD DS + SS + DS+
Sbjct: 724 SDSDSSNSSDSSDSSNSSDSSD-----SSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSD 778
Query: 1020 LSFDSDGNQNILSSTLTSKGN-----ETIESIFKAEDLLPEAASLSENLDISKEETPPVR 1074
S SD N + SS + N + +S ++ ++++ S++ + S
Sbjct: 779 SSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNS 838
Query: 1075 TLKSQSSLSGKPKERCPPNLAPLCVSYKNMKRSSSQMSLDTISLDSMILEEQLLESDGSD 1134
+ S SS S + N + S + S S S D S DS E SD SD
Sbjct: 839 SDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSD--SSDSSDSNESSNSSDSSD 896
Query: 1135 SHMFLEKGNKKNSTTNYRGTAESVNAGANLQNYGETSPDAISTNSEGAQENHD 1187
S + + +S ++ + + + + N + S + S+NS + ++ D
Sbjct: 897 SSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSD 949
Score = 42.4 bits (98), Expect = 0.003
Identities = 70/312 (22%), Positives = 112/312 (35%), Gaps = 22/312 (7%)
Query: 877 DQANTLKSPVSESVSPVVPDYLPTENGDFLSSKRKQISRDINRIRSVTVNHMSDNRSMSV 936
D +N+ S S S +++ D S S D + + + S + S S
Sbjct: 748 DSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSS 807
Query: 937 DLSHIPLKDPLLFKSASDTNLQKGISFMDYLSDKHLGKISEDESSGLVYKSGSGEIGSET 996
D S ++SD++ S SD S D S S++
Sbjct: 808 DSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDS 867
Query: 997 SDKKDSFYT-DSSSILNYREDSNILSFDSDGNQNILSSTLTSKGNETIESIFKAEDLLPE 1055
SD DS + DSS + E SN S DS + N S + N + S E
Sbjct: 868 SDSSDSSNSSDSSDSSDSNESSN--SSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSE 925
Query: 1056 AASLSENLDISKEETPPVRTLKSQSSLSGKPKERCPPNLAPLCVSYKNMKRSSSQMSLDT 1115
+++ S+N + S + S SS S S + S+S S D+
Sbjct: 926 SSNSSDNSNSSDSSNSSDSSDSSDSSNSSD--------------SSNSSDSSNSSDSSDS 971
Query: 1116 ISLDSMILEEQLLESDGSDSHMFLEKGNKKNSTTNYRGTAESVNAGANLQNYGETSPDAI 1175
S DS SD SDS + + NS+ + + S + N ++S +
Sbjct: 972 NSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSS-----DSSNSSDSSNSSD 1026
Query: 1176 STNSEGAQENHD 1187
S+NS + ++ D
Sbjct: 1027 SSNSSDSSDSSD 1038
Score = 41.2 bits (95), Expect = 0.007
Identities = 70/316 (22%), Positives = 124/316 (39%), Gaps = 26/316 (8%)
Query: 877 DQANTLKSPVSESVSPVVPDYLPTENGDFLSSKRKQISRDINRIRSVTVNHMSDNRSMSV 936
D +++ S S S S +++ D +S S D + S + S++ S
Sbjct: 667 DSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDS 726
Query: 937 DLSHIPLKDPLLFKSASDTNLQKGISFMDYLSDKHLGKISEDESSGLVYKSGSGEIGSET 996
D S+ +SD++ S SD S D S S + S++
Sbjct: 727 DSSN-----------SSDSSDSSNSSDSSDSSDSSNSSDSSDSSD-----SSNSSDSSDS 770
Query: 997 SDKKDSFYTDSSSILNYREDSNILSFDSDGNQNILSSTLTSKGNETIESIFKAEDLLPEA 1056
SD DS +DSS+ + + SN S DS + N S+ +S +++ +S ++
Sbjct: 771 SDSSDS--SDSSNSSDSNDSSN--SSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDS 826
Query: 1057 ASLSENLDISKEETPPVRTLKSQSSLSGKPKERCPPNLAPLCVSYKNMKRSSSQMSLDTI 1116
++ S++ D S + S S S N + S + S S S D+
Sbjct: 827 SNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSN 886
Query: 1117 ----SLDSMILEEQLLESDGSDSHMFLEKGNKKNSTTNYRGTAESVNA-GANLQNYGETS 1171
S DS +SD SDS + + NS+ + + S N+ ++ N ++S
Sbjct: 887 ESSNSSDSSDSSNSS-DSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSS 945
Query: 1172 PDAISTNSEGAQENHD 1187
+ S+NS + + D
Sbjct: 946 DSSDSSNSSDSSNSSD 961
Score = 41.2 bits (95), Expect = 0.007
Identities = 50/221 (22%), Positives = 90/221 (40%), Gaps = 7/221 (3%)
Query: 968 SDKHLGKISEDESSGLVYKSGSGEIGSETSDKKDSFYTDSSSILNYREDSNILSFDSDGN 1027
SD S+ +S S S++SD DS +SS+ + + SN DS +
Sbjct: 851 SDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDS--NESSNSSDSSDSSNSSDSDSSDS 908
Query: 1028 QNILSSTLTSKGNETIESIFKAEDLLPEAASLSENLDISKEETPPVRTLKSQSSLSGKPK 1087
N S+ +S +++ ES +++ ++ S + D S + S SS S
Sbjct: 909 SNSSDSSDSSNSSDSSESSNSSDN--SNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSS 966
Query: 1088 ERCPPNLAPLCVSYKNMKRSSSQMSLDTISLDSMILEEQLLESDGSDSHMFLEKGNKKNS 1147
+ N + S + S S S D S DS SD SDS + NS
Sbjct: 967 DSSDSNSSDSSDSSNSSDSSDSSDSSD--SSDSSDSSNSSDSSDSSDSSDSSNSSDSSNS 1024
Query: 1148 TTNYRGTAESVNA-GANLQNYGETSPDAISTNSEGAQENHD 1187
+ + + S ++ ++ + ++S + S+NS + ++ D
Sbjct: 1025 SDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSD 1065
Score = 40.0 bits (92), Expect = 0.017
Identities = 64/311 (20%), Positives = 117/311 (37%), Gaps = 3/311 (0%)
Query: 877 DQANTLKSPVSESVSPVVPDYLPTENGDFLSSKRKQISRDINRIRSVTVNHMSDNRSMSV 936
D +N S S S +++ D S S D + + + + SD+ + S
Sbjct: 854 DSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSD 913
Query: 937 DLSHIPLKDPLLFKSASDTNLQKGISFMDYLSDKHLGKISEDESSGLVYKSGSGEIGSET 996
D ++SD + S SD S D S+ + S S +
Sbjct: 914 SSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNS 973
Query: 997 SDKKDSFYTDSSSILNYREDSNILSFDSDGNQNILSSTLTSKGNETIESIFKAEDLLPEA 1056
SD DS + SS + DS+ S S+ + + SS + N + S ++
Sbjct: 974 SDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDS 1033
Query: 1057 ASLSENLDISKEETPPVRTLKSQSSLSGKPKERCPPNLAPLCVSYKNMKRSSSQMSLDTI 1116
+ S++ D S + S SS S + + + S + SS S +
Sbjct: 1034 SDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSS-DSSDSSDSSESSDSSDSSN 1092
Query: 1117 SLDSMILEEQLLESDGSDSHMFLEKGNKKNSTTNYRGTAESVNAGANLQNYGETSPDAIS 1176
S DS + SD SDS + + NS+ + + S ++ ++ N ++S + S
Sbjct: 1093 SSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSS--NSSDSSDSSES 1150
Query: 1177 TNSEGAQENHD 1187
++S + ++ D
Sbjct: 1151 SDSSDSSDSSD 1161
Score = 38.9 bits (89), Expect = 0.037
Identities = 63/311 (20%), Positives = 117/311 (37%), Gaps = 23/311 (7%)
Query: 877 DQANTLKSPVSESVSPVVPDYLPTENGDFLSSKRKQISRDINRIRSVTVNHMSDNRSMSV 936
D +++ S S+S S D +++ D S S + S + SD+ S
Sbjct: 562 DSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSD 621
Query: 937 DLSHIPLKDPLLFKSASDTNLQKGISFMDYLSDKHLGKISEDESSGLVYKSGSGEIGSET 996
S KS SD+ S D SD S+ + S + S++
Sbjct: 622 SKSDSS-------KSESDS------SDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDS 668
Query: 997 SDKKDSFYTDSSSILNYREDSNILSFDSDGNQNILSSTLTSKGNETIESIFKAEDLLPEA 1056
SD DS + SSS + DS+ S S+ +++ SS + + + ++
Sbjct: 669 SDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDS 728
Query: 1057 ASLSENLDISKEETPPVRTLKSQSSLSGKPKERCPPNLAPLCVSYKNMKRSSSQMSLDTI 1116
++ S++ D S + S SS S + S + SS S +
Sbjct: 729 SNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDS----------SNSSDSSDSSDSSDSSD 778
Query: 1117 SLDSMILEEQLLESDGSDSHMFLEKGNKKNSTTNYRGTAESVNAGANLQNYGETSPDAIS 1176
S +S + SD SDS + N +S+ + + + ++ N ++S + S
Sbjct: 779 SSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNS 838
Query: 1177 TNSEGAQENHD 1187
++S + ++ D
Sbjct: 839 SDSSDSSDSSD 849
Score = 38.5 bits (88), Expect = 0.048
Identities = 44/202 (21%), Positives = 83/202 (41%), Gaps = 23/202 (11%)
Query: 987 SGSGEIGSETSDKKDSFYTDSSSILNYREDSNILSFDSDGNQNILSSTLTSKGNETIESI 1046
+G+G G++ +DK DS S S + DS+ S SD + + S + +S +++ +S
Sbjct: 527 NGNGNNGNDDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDS- 585
Query: 1047 FKAEDLLPEAASLSENLDISKEETPPVRTLKSQSSLSGKPKERCPPNLAPLCVSYKNMKR 1106
+ D +S S N S + + + S S + K
Sbjct: 586 -DSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDS--------------------SDSKS 624
Query: 1107 SSSQMSLDTISLDSMILEEQLLESDGSDSHMFLEKGNKKNSTTNYRGTAES-VNAGANLQ 1165
SS+ D+ DS SD SD+ + N NS+ + + S ++ ++
Sbjct: 625 DSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSS 684
Query: 1166 NYGETSPDAISTNSEGAQENHD 1187
N ++S + S+NS + ++ D
Sbjct: 685 NSSDSSDSSDSSNSSESSDSSD 706
Score = 37.0 bits (84), Expect = 0.14
Identities = 64/320 (20%), Positives = 116/320 (36%), Gaps = 14/320 (4%)
Query: 877 DQANTLKSPVSESVSPVVPDYLPTENGDFLSSKRKQISRDINRIR--SVTVNHMSDNRSM 934
D +++ S S+S D +++ D +S S D + S + + SD+
Sbjct: 570 DSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKS 629
Query: 935 SVDLSHIPLKDPLLFKSASDTNLQKGISFMDYLSDKHLGKISEDESSGLVYKSGSGEIGS 994
D S K ++SD++ S S+ S D S S S
Sbjct: 630 ESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSS--SSSDSSNSS 687
Query: 995 ETSDKKDSFYTDSSSILNYREDSNILSFDSDGNQNILSSTLTSKGNETIESIFKAEDLLP 1054
++SD DS + SS + DS+ N N S ++ + + S
Sbjct: 688 DSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSS 747
Query: 1055 EAASLSENLDISKEETPPVRTLKSQSSLSGKPKERCPPN-------LAPLCVSYKNMKRS 1107
++++ S++ D S + S SS S N + S + S
Sbjct: 748 DSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSS 807
Query: 1108 SSQMSLDTISLDSMILEEQLLESDGSDSHMFLEKGNKKNSTTNYRGTAESVNAGANLQNY 1167
S S D+ DS + SD SDS + +S+ + G+ + ++ N
Sbjct: 808 DSSDSSDSSDSDSSNSSDSSNSSDSSDSS---NSSDSSDSSDSSDGSDSDSSNRSDSSNS 864
Query: 1168 GETSPDAISTNSEGAQENHD 1187
++S + S+NS + ++ D
Sbjct: 865 SDSSDSSDSSNSSDSSDSSD 884
Score = 36.6 bits (83), Expect = 0.18
Identities = 56/263 (21%), Positives = 100/263 (38%), Gaps = 10/263 (3%)
Query: 926 NHMSDNRSMSVDLSHIPLKDPLLFKSASDTNLQKGISFMDYLSDKHLGKISEDESSGLVY 985
++ SD+ + S + D +SD++ S SD S D S
Sbjct: 1016 SNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSS-- 1073
Query: 986 KSGSGEIGSETSDKKDSFYTDSSSILNYREDSNILSFDSDGNQNILSSTLTSKGNETIES 1045
S SE+SD DS + SS + DS+ S SD + + SS + + + S
Sbjct: 1074 DSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSS 1133
Query: 1046 IFKAEDLLPEAASLSENLDISKEETPPVRTLKSQSSLSGKPKERCPPNLAPLCVSYKNMK 1105
+++ SE+ D S + S SS S + S +
Sbjct: 1134 DSSDSSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNS-------SDSSDS 1186
Query: 1106 RSSSQMSLDTISLDSMILEEQLLESDGSDSHMFLEKGNKKNSTTNYRGTAESVNAGANLQ 1165
SS S + S DS + SD SDS + + +S+ + + S ++ ++
Sbjct: 1187 SDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDSSDSSDSSDS 1246
Query: 1166 NYGETSPDAISTNSEGAQENHDD 1188
+ S D+ S +S+ +++D+
Sbjct: 1247 SNSSDSSDS-SDSSDSTSDSNDE 1268
Score = 35.4 bits (80), Expect = 0.41
Identities = 48/214 (22%), Positives = 98/214 (45%), Gaps = 16/214 (7%)
Query: 986 KSGSGEIGSETSDKKDSFYTDSSSILNYRE----DSNILSFDSDGNQNILSSTLTSKGNE 1041
KS SG+ S++SD S ++SS + + DSN S DSD + + S + S ++
Sbjct: 539 KSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDSN-SSSDSDSSDSDSSDSSDSDSSD 597
Query: 1042 TIESIFKAEDLLPEAASLSENLDISKEETPPVRTLKSQSSLSGKPKERCPPNLAPLCVSY 1101
+ S ++ +++ S++ D S ++ ++ +S SS S + N + +
Sbjct: 598 SSNSSDSSDS--SDSSDSSDSSDSSDSKSDSSKS-ESDSSDSDSKSDSSDSNSSDSSDNS 654
Query: 1102 KNMKRSSSQMSLDTI----SLDSMILEEQLLESDGSD----SHMFLEKGNKKNSTTNYRG 1153
+ S+S S D+ S DS + SD SD S+ + +S ++
Sbjct: 655 DSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSD 714
Query: 1154 TAESVNAGANLQNYGETSPDAISTNSEGAQENHD 1187
+++S N+ ++ + +S + S+NS + ++ D
Sbjct: 715 SSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSD 748
>gi|54607141 vacuolar protein sorting 13D isoform 2 [Homo sapiens]
Length = 4363
Score = 43.1 bits (100), Expect = 0.002
Identities = 23/87 (26%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 1 MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAINK 60
+ G++ + +L ++ NL+ D+++++ LKG EL+NL L ++ L+ L+LP +
Sbjct: 2 LEGLVAWVLNTYLGKYVNNLNTDQLSVALLKGAVELENLPLKKDALKE-LELP--FEVKA 58
Query: 61 VFCNKASIRIPWTKLKTHPICLSLDKV 87
F K +++IP+ + P +S+ +
Sbjct: 59 GFIGKVTLQIPFYRPHVDPWVISISSL 85
>gi|54607139 vacuolar protein sorting 13D isoform 1 [Homo sapiens]
Length = 4388
Score = 43.1 bits (100), Expect = 0.002
Identities = 23/87 (26%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 1 MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAINK 60
+ G++ + +L ++ NL+ D+++++ LKG EL+NL L ++ L+ L+LP +
Sbjct: 2 LEGLVAWVLNTYLGKYVNNLNTDQLSVALLKGAVELENLPLKKDALKE-LELP--FEVKA 58
Query: 61 VFCNKASIRIPWTKLKTHPICLSLDKV 87
F K +++IP+ + P +S+ +
Sbjct: 59 GFIGKVTLQIPFYRPHVDPWVISISSL 85
>gi|239745085 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 3 [Homo sapiens]
Length = 601
Score = 37.4 bits (85), Expect = 0.11
Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 10/155 (6%)
Query: 1308 TVMPMKIQVSNTKINLKDDSPRSSTVSLEPAPVTVHIDHLVVERSDDGSFHIRDSHMLNT 1367
T+ +K Q L+++ ++ + V I L +++ G + H +
Sbjct: 103 TIKSLKQQKKQVVHQLEEEKKANNEKQKAERELEVQIQRLNIQK---GKLNTDLYHTKRS 159
Query: 1368 GNDLKENVKSDSVLLTSG---KYDLKKQRSVTQATQTSPGVPWPSQSANFPEFSFDFTRE 1424
+E K +V L K +L++ S ATQ + S+S E+ E
Sbjct: 160 LRYFEEESKDLAVRLQHSLQRKGELERALSAVTATQKKKAERFSSRSKARTEWKL----E 215
Query: 1425 QLMEENESLKQELAKAKMALAEAHLEKDALLHHIK 1459
Q M E LK +L + K +L E LE+D H+K
Sbjct: 216 QSMREQALLKAQLTQLKESLKEVQLERDEYAEHLK 250
>gi|239745083 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 4 [Homo sapiens]
Length = 590
Score = 37.4 bits (85), Expect = 0.11
Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 10/155 (6%)
Query: 1308 TVMPMKIQVSNTKINLKDDSPRSSTVSLEPAPVTVHIDHLVVERSDDGSFHIRDSHMLNT 1367
T+ +K Q L+++ ++ + V I L +++ G + H +
Sbjct: 91 TIKSLKQQKKQVVHQLEEEKKANNEKQKAERELEVQIQRLNIQK---GKLNTDLYHTKRS 147
Query: 1368 GNDLKENVKSDSVLLTSG---KYDLKKQRSVTQATQTSPGVPWPSQSANFPEFSFDFTRE 1424
+E K +V L K +L++ S ATQ + S+S E+ E
Sbjct: 148 LRYFEEESKDLAVRLQHSLQRKGELERALSAVTATQKKKAERFSSRSKARTEWKL----E 203
Query: 1425 QLMEENESLKQELAKAKMALAEAHLEKDALLHHIK 1459
Q M E LK +L + K +L E LE+D H+K
Sbjct: 204 QSMREQALLKAQLTQLKESLKEVQLERDEYAEHLK 238
>gi|239745081 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 2 [Homo sapiens]
Length = 629
Score = 37.4 bits (85), Expect = 0.11
Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 10/155 (6%)
Query: 1308 TVMPMKIQVSNTKINLKDDSPRSSTVSLEPAPVTVHIDHLVVERSDDGSFHIRDSHMLNT 1367
T+ +K Q L+++ ++ + V I L +++ G + H +
Sbjct: 103 TIKSLKQQKKQVVHQLEEEKKANNEKQKAERELEVQIQRLNIQK---GKLNTDLYHTKRS 159
Query: 1368 GNDLKENVKSDSVLLTSG---KYDLKKQRSVTQATQTSPGVPWPSQSANFPEFSFDFTRE 1424
+E K +V L K +L++ S ATQ + S+S E+ E
Sbjct: 160 LRYFEEESKDLAVRLQHSLQRKGELERALSAVTATQKKKAERFSSRSKARTEWKL----E 215
Query: 1425 QLMEENESLKQELAKAKMALAEAHLEKDALLHHIK 1459
Q M E LK +L + K +L E LE+D H+K
Sbjct: 216 QSMREQALLKAQLTQLKESLKEVQLERDEYAEHLK 250
>gi|63252863 BTB (POZ) domain containing 12 [Homo sapiens]
Length = 1834
Score = 37.4 bits (85), Expect = 0.11
Identities = 37/154 (24%), Positives = 64/154 (41%), Gaps = 8/154 (5%)
Query: 944 KDPLLFKSASDTNLQKGISFMDYLSDKHLGKISEDESSGLVYKSGSGEIGSETSDKKDSF 1003
+D + + + QKG L ++ G + E KS S ++ D S
Sbjct: 1084 RDRSILTLSKEPGHQKGKERRSVLECRNKGVLMFPE------KSPSIDLTQSNPDHSSSR 1137
Query: 1004 YTDSSSILNYREDSNILSFDSDGNQNILSSTLTSKGNETIESIFKAEDLLPEAASLSENL 1063
SSS LN ED IL DSD + + + S ++ +E KA ++ P + L +
Sbjct: 1138 SQKSSSKLN-EEDEVILLLDSDEELELEQTKMKSISSDPLEEK-KALEISPRSCELFSII 1195
Query: 1064 DISKEETPPVRTLKSQSSLSGKPKERCPPNLAPL 1097
D+ ++ P +S++ L + + P N L
Sbjct: 1196 DVDADQEPSQSPPRSEAVLQQEDEGALPENRGSL 1229
>gi|15619008 vacuolar protein sorting 13A isoform B [Homo sapiens]
Length = 3095
Score = 37.0 bits (84), Expect = 0.14
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 11 KHLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAINKVFCNKASIRI 70
+ L + +L +++L KG LKNL++ E L + LD+P + + + + I
Sbjct: 13 RFLGDYVVDLDTSQLSLGIWKGAVALKNLQIKENAL-SQLDVPFKVKVGHI--GNLKLII 69
Query: 71 PWTKLKTHPICLSLDKVIM 89
PW L T P+ L+++ +
Sbjct: 70 PWKNLYTQPVEAVLEEIYL 88
>gi|66346676 vacuolar protein sorting 13A isoform D [Homo sapiens]
Length = 3069
Score = 37.0 bits (84), Expect = 0.14
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 11 KHLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAINKVFCNKASIRI 70
+ L + +L +++L KG LKNL++ E L + LD+P + + + + I
Sbjct: 13 RFLGDYVVDLDTSQLSLGIWKGAVALKNLQIKENAL-SQLDVPFKVKVGHI--GNLKLII 69
Query: 71 PWTKLKTHPICLSLDKVIM 89
PW L T P+ L+++ +
Sbjct: 70 PWKNLYTQPVEAVLEEIYL 88
>gi|66346674 vacuolar protein sorting 13A isoform A [Homo sapiens]
Length = 3174
Score = 37.0 bits (84), Expect = 0.14
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 11 KHLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAINKVFCNKASIRI 70
+ L + +L +++L KG LKNL++ E L + LD+P + + + + I
Sbjct: 13 RFLGDYVVDLDTSQLSLGIWKGAVALKNLQIKENAL-SQLDVPFKVKVGHI--GNLKLII 69
Query: 71 PWTKLKTHPICLSLDKVIM 89
PW L T P+ L+++ +
Sbjct: 70 PWKNLYTQPVEAVLEEIYL 88
>gi|66346672 vacuolar protein sorting 13A isoform C [Homo sapiens]
Length = 3135
Score = 37.0 bits (84), Expect = 0.14
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 11 KHLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAINKVFCNKASIRI 70
+ L + +L +++L KG LKNL++ E L + LD+P + + + + I
Sbjct: 13 RFLGDYVVDLDTSQLSLGIWKGAVALKNLQIKENAL-SQLDVPFKVKVGHI--GNLKLII 69
Query: 71 PWTKLKTHPICLSLDKVIM 89
PW L T P+ L+++ +
Sbjct: 70 PWKNLYTQPVEAVLEEIYL 88
>gi|42544121 vacuolar protein sorting 13C protein isoform 1A [Homo
sapiens]
Length = 3710
Score = 34.7 bits (78), Expect = 0.69
Identities = 34/192 (17%), Positives = 73/192 (38%), Gaps = 36/192 (18%)
Query: 1 MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAINK 60
+ ++ + + L + +NL+ ++ L G L NL++ E L LD+P + +
Sbjct: 3 LESVVADLLNRFLGDYVENLNKSQLKLGIWGGNVALDNLQIKENALSE-LDVPFKVKAGQ 61
Query: 61 VFCNKASIRIPWTKLKTHPICLSLDKVIM-------------------------EMSTCE 95
+ +K +++IPW L + +L+ + + E+S E
Sbjct: 62 I--DKLTLKIPWKNLYGEAVVATLEGLYLLVVPGASIKYDAVKEEKSLQDVKQKELSRIE 119
Query: 96 E--PRSPNGPSPIATASGQSEYGFAEKVVEGISVSVNSIVIRI------GAKAFNASFEL 147
E ++ P A +V++ + V + I I+ + + L
Sbjct: 120 EALQKAAEKDKPKEAKKDTFVEKLATQVIKNVQVKITDIHIKYEDDVTDPKRPLSFGVTL 179
Query: 148 SQLRIYSVNAHW 159
+L + + N HW
Sbjct: 180 GELSLLTANEHW 191
>gi|66348091 vacuolar protein sorting 13C protein isoform 1B [Homo
sapiens]
Length = 3585
Score = 34.7 bits (78), Expect = 0.69
Identities = 34/192 (17%), Positives = 73/192 (38%), Gaps = 36/192 (18%)
Query: 1 MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAINK 60
+ ++ + + L + +NL+ ++ L G L NL++ E L LD+P + +
Sbjct: 3 LESVVADLLNRFLGDYVENLNKSQLKLGIWGGNVALDNLQIKENALSE-LDVPFKVKAGQ 61
Query: 61 VFCNKASIRIPWTKLKTHPICLSLDKVIM-------------------------EMSTCE 95
+ +K +++IPW L + +L+ + + E+S E
Sbjct: 62 I--DKLTLKIPWKNLYGEAVVATLEGLYLLVVPGASIKYDAVKEEKSLQDVKQKELSRIE 119
Query: 96 E--PRSPNGPSPIATASGQSEYGFAEKVVEGISVSVNSIVIRI------GAKAFNASFEL 147
E ++ P A +V++ + V + I I+ + + L
Sbjct: 120 EALQKAAEKDKPKEAKKDTFVEKLATQVIKNVQVKITDIHIKYEDDVTDPKRPLSFGVTL 179
Query: 148 SQLRIYSVNAHW 159
+L + + N HW
Sbjct: 180 GELSLLTANEHW 191
>gi|239745087 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 1 [Homo sapiens]
Length = 547
Score = 34.3 bits (77), Expect = 0.91
Identities = 35/155 (22%), Positives = 63/155 (40%), Gaps = 9/155 (5%)
Query: 1308 TVMPMKIQVSNTKINLKDDSPRSSTVSLEPAPVTVHIDHLVVERSDDGSFHIRDSHMLNT 1367
T+ +K Q L+++ ++ + V I L +++ G + H +
Sbjct: 111 TIKSLKQQKKQVVHQLEEEKKANNEKQKAERELEVQIQRLNIQK---GKLNTDLYHTKRS 167
Query: 1368 GNDLKENVKSDSVLLTSG---KYDLKKQRSVTQATQTSPGVPWPSQSANFPEFSFDFTRE 1424
+E K +V L K +L++ S ATQ Q ++ + ++ E
Sbjct: 168 LRYFEEESKDLAVRLQHSLQRKGELERALSAVTATQKKKA---ERQFSSRSKARTEWKLE 224
Query: 1425 QLMEENESLKQELAKAKMALAEAHLEKDALLHHIK 1459
Q M E LK +L + K +L E LE+D H+K
Sbjct: 225 QSMREQALLKAQLTQLKESLKEVQLERDEYAEHLK 259
>gi|118197272 ATG2 autophagy related 2 homolog B [Homo sapiens]
Length = 2078
Score = 34.3 bits (77), Expect = 0.91
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 13/115 (11%)
Query: 5 IKKQILKHLSR------FTKNLSPDKINLSTLKGEGELKNLELDEEVLQNML---DLPTW 55
IKK+ ++L + + LS ++++L +G G L + LD+ L +L D P
Sbjct: 9 IKKRACRYLLQRYLGHFLQEKLSLEQLSLDLYQGTGSLAQVPLDKWCLNEILESADAP-- 66
Query: 56 LAINKVFCNKASIRIPWTKLKTHPICLSLDKVIMEMSTCEEPRSPNGPSPIATAS 110
L + + F S+ +PW L L + +EM PR G P+ +S
Sbjct: 67 LEVTEGFIQSISLSVPWGSLLQDNCALEVRG--LEMVFRPRPRPATGSEPMYWSS 119
>gi|66347845 vacuolar protein sorting 13C protein isoform 2B [Homo
sapiens]
Length = 3628
Score = 34.3 bits (77), Expect = 0.91
Identities = 19/85 (22%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 1 MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAINK 60
+ ++ + + L + +NL+ ++ L G L NL++ E L LD+P + +
Sbjct: 3 LESVVADLLNRFLGDYVENLNKSQLKLGIWGGNVALDNLQIKENALSE-LDVPFKVKAGQ 61
Query: 61 VFCNKASIRIPWTKLKTHPICLSLD 85
+ +K +++IPW L + +L+
Sbjct: 62 I--DKLTLKIPWKNLYGEAVVATLE 84
>gi|66347828 vacuolar protein sorting 13C protein isoform 2A [Homo
sapiens]
Length = 3753
Score = 34.3 bits (77), Expect = 0.91
Identities = 19/85 (22%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 1 MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAINK 60
+ ++ + + L + +NL+ ++ L G L NL++ E L LD+P + +
Sbjct: 3 LESVVADLLNRFLGDYVENLNKSQLKLGIWGGNVALDNLQIKENALSE-LDVPFKVKAGQ 61
Query: 61 VFCNKASIRIPWTKLKTHPICLSLD 85
+ +K +++IPW L + +L+
Sbjct: 62 I--DKLTLKIPWKNLYGEAVVATLE 84
>gi|239745132 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 [Homo sapiens]
Length = 602
Score = 33.9 bits (76), Expect = 1.2
Identities = 36/155 (23%), Positives = 62/155 (40%), Gaps = 10/155 (6%)
Query: 1308 TVMPMKIQVSNTKINLKDDSPRSSTVSLEPAPVTVHIDHLVVERSDDGSFHIRDSHMLNT 1367
T+ +K Q + L+++ ++ + V I L +++ G + HM +
Sbjct: 98 TIKSLKQQKKQVEHQLEEEKKANNKKQKAKRVLEVQIQTLNIQK---GKLNTDLYHMKRS 154
Query: 1368 GNDLKENVKSDSVLLTSG---KYDLKKQRSVTQATQTSPGVPWPSQSANFPEFSFDFTRE 1424
+E K +V L K +L+ S ATQ S+S E+ E
Sbjct: 155 LRYFEEKSKDLAVCLQHSLQRKGELESVLSNVMATQKKKANQLSSRSKARTEWKL----E 210
Query: 1425 QLMEENESLKQELAKAKMALAEAHLEKDALLHHIK 1459
Q M E LK +L + K + + LE+D H+K
Sbjct: 211 QSMREEALLKVQLTQLKESFQQVQLERDECAEHLK 245
>gi|239745130 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 1 [Homo sapiens]
Length = 632
Score = 33.9 bits (76), Expect = 1.2
Identities = 36/155 (23%), Positives = 62/155 (40%), Gaps = 10/155 (6%)
Query: 1308 TVMPMKIQVSNTKINLKDDSPRSSTVSLEPAPVTVHIDHLVVERSDDGSFHIRDSHMLNT 1367
T+ +K Q + L+++ ++ + V I L +++ G + HM +
Sbjct: 99 TIKSLKQQKKQVEHQLEEEKKANNKKQKAKRVLEVQIQTLNIQK---GKLNTDLYHMKRS 155
Query: 1368 GNDLKENVKSDSVLLTSG---KYDLKKQRSVTQATQTSPGVPWPSQSANFPEFSFDFTRE 1424
+E K +V L K +L+ S ATQ S+S E+ E
Sbjct: 156 LRYFEEKSKDLAVCLQHSLQRKGELESVLSNVMATQKKKANQLSSRSKARTEWKL----E 211
Query: 1425 QLMEENESLKQELAKAKMALAEAHLEKDALLHHIK 1459
Q M E LK +L + K + + LE+D H+K
Sbjct: 212 QSMREEALLKVQLTQLKESFQQVQLERDECAEHLK 246
>gi|33620745 pre-mRNA cleavage complex II protein Pcf11 [Homo sapiens]
Length = 1555
Score = 33.9 bits (76), Expect = 1.2
Identities = 56/276 (20%), Positives = 101/276 (36%), Gaps = 43/276 (15%)
Query: 898 LPTENGDFLSSKRKQISRDINRIRSVTVNHMSDNRSMSVDLSHIPLKDPLLFKSASDTNL 957
+P+E L+S +++ S+ +I ++ + D++S S S PLK+ L
Sbjct: 333 IPSEK---LNSSKQEKSKSGEKITKKELDQL-DSKSKSKSKSPSPLKNKLSHTKDLKNQE 388
Query: 958 QKGISFMDYLS-DKHLGKISEDESSGLVYKSGSGEIGSETSDKKDSFYTDSSSILNYRED 1016
+ + D D L K +D++ G K + +T++KKD
Sbjct: 389 SESMRLSDMNKRDPRLKKHLQDKTDG---KDDDVKEKRKTAEKKDK-------------- 431
Query: 1017 SNILSFDSDGNQNILSSTLTSKGNETIESIFKAEDLLPEAASLSENLDISKEETPPVRTL 1076
D + L N+ I I + +D + E + K+ T P R+
Sbjct: 432 --------DEHMKSSEHRLAGSRNKIINGIVQKQDTITEESE--------KQGTKPGRSS 475
Query: 1077 KSQSSLSGKPKERCPPNLAPLCVSYKNMKRSSSQMSLDTISLDSMILEEQLLESDGSDSH 1136
+ S S PK R +P+ S K R S + ++S S ++ +S SH
Sbjct: 476 TRKRSRSRSPKSR-----SPIIHSPKRRDRRSPKRRQRSMSPTSTPKAGKIRQSGAKQSH 530
Query: 1137 MFLEKGNKKNSTTNYRGTAESVNAGANLQNYGETSP 1172
M + R T + + ++ E P
Sbjct: 531 MEEFTPPSREDRNAKRSTKQDIRDPRRMKKTEEERP 566
>gi|16975496 cortactin binding protein 2 [Homo sapiens]
Length = 1663
Score = 33.9 bits (76), Expect = 1.2
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 27/153 (17%)
Query: 969 DKHLGKISEDESSGLVYKSGSGEIGSETSDKKDSFYTDSSSILNYREDSNILSFDSDGNQ 1028
D+ L S+DE+ + E+ S S K +S D S I + R+D + FDS GN
Sbjct: 1517 DQRLSLGSDDEADLVK------ELQSMCSSKSES---DISKIADSRDDLRM--FDSSGNN 1565
Query: 1029 NILSSTLTSKGNETIESIFKAEDLLPEAASLSENLDISKEETPPVRTLKSQSSLS-GKPK 1087
+LS+T+ + L S E +S +T KS++ L + K
Sbjct: 1566 PVLSATINN---------------LRMPVSQKEVSPLSSHQTTECSNSKSKTELGVSRVK 1610
Query: 1088 ERCPPNLAPLCVSYKNMKRSSSQMSLDTISLDS 1120
P + + +N KRSSS + I +++
Sbjct: 1611 SFLPVPRSKVTQCSQNTKRSSSSSNTRQIEINN 1643
>gi|116686122 kinesin family member 4 [Homo sapiens]
Length = 1232
Score = 33.5 bits (75), Expect = 1.5
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 1424 EQLMEENESLKQELAKAKMALAEAHLEKDALL 1455
+QL+ ENE +KQ+L ++A + HL KD LL
Sbjct: 981 QQLLRENEIIKQKLTLLQVASRQKHLPKDTLL 1012
>gi|151301098 zinc finger, DBF-type containing 2 [Homo sapiens]
Length = 2354
Score = 33.5 bits (75), Expect = 1.5
Identities = 41/190 (21%), Positives = 75/190 (39%), Gaps = 31/190 (16%)
Query: 325 SHLDLHICDDIHAK-EKESNRRITGGAMQLSFTQLTIDYYPYHKAGDSCNHWMYFSDATK 383
++L+ H+ H ++S R+I ++ F Q + ++PYH C D T
Sbjct: 16 NNLEQHLFSAQHRSLTRQSRRQICTSSLMERFLQDVLQHHPYH-----CQESSSTQDETH 70
Query: 384 TKNGWANELLH---EFECNVEMLKQAVKDHNVG-------SPPKSPTHASPQHTQTEKDY 433
G ++E++H F E + V+D + S P H+ P +Q
Sbjct: 71 VNTGSSSEVVHLDDAFSEEEEEDEDKVEDEDATEERPSEVSEPIEELHSRPHKSQ----- 125
Query: 434 PLKGTCRT---PSVLSQQSKAKLMSSSVVVRLA----DFNIYQVSTAEQCRSS-PKSMIC 485
+GT PSV+ + K + V ++ N+ + A RS+ + +
Sbjct: 126 --EGTQEVSVRPSVIQKLEKGQQQPLEFVHKIGASVRKCNLVDIGQATNNRSNLVRPPVI 183
Query: 486 CNKKSLYLPQ 495
CN + LP+
Sbjct: 184 CNAPASCLPE 193
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.129 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,255,649
Number of Sequences: 37866
Number of extensions: 2353586
Number of successful extensions: 6404
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 6184
Number of HSP's gapped (non-prelim): 162
length of query: 1464
length of database: 18,247,518
effective HSP length: 115
effective length of query: 1349
effective length of database: 13,892,928
effective search space: 18741559872
effective search space used: 18741559872
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 69 (31.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.