Guide to the Human Genome
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Name: WDR33 Sequence: fasta or formatted (257aa) NCBI GI: 55743159
Description:

WD repeat domain 33 isoform 3

Referenced in:

WD Repeat Proteins

Other entries for this name:
alt prot [326aa] WD repeat domain 33 isoform 2
alt prot [1336aa] WD repeat domain 33 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         16           1
 C cysteine            2.3          6           1
 D aspartate           5.8         15           2
 E glutamate           3.5          9           2
 F phenylalanine       6.6         17           2
 G glycine             4.3         11           2
 H histidine           3.5          9           2
 I isoleucine          3.9         10           1
 K lysine              5.1         13           1
 L leucine             5.1         13           1
 M methionine          4.7         12           1
 N asparagine          5.8         15           2
 P proline             5.4         14           2
 Q glutamine           5.4         14           3
 R arginine            8.9         23           2
 S serine              4.7         12           2
 T threonine           7.0         18           2
 V valine              5.8         15           2
 W tryptophan          2.7          7           1
 Y tyrosine            3.1          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WD repeat domain 33 isoform 3 
WDR33                 0.926   WD repeat domain 33 isoform 1 
WDR33                 0.794   WD repeat domain 33 isoform 2 
WDR61                 0.073   WD repeat domain 61 
TBL1XR1               0.057   transducin (beta)-like 1 X-linked receptor 1 
TAF5L                 0.057   PCAF associated factor 65 beta isoform a 
TAF5                  0.055   TBP-associated factor 5 
APAF1                 0.053   apoptotic peptidase activating factor 1 isoform d [H...
APAF1                 0.053   apoptotic peptidase activating factor 1 isoform c [H...
APAF1                 0.053   apoptotic peptidase activating factor 1 isoform b [Ho...
APAF1                 0.053   apoptotic peptidase activating factor 1 isoform a [Ho...
WDR51B                0.053   WD repeat domain 51B 
WDR51A                0.052   WD repeat domain 51A isoform 3 
WDR51A                0.052   WD repeat domain 51A isoform 2 
WDR51A                0.052   WD repeat domain 51A isoform 1 
WDR38                 0.052   WD repeat domain 38 
CIAO1                 0.052   WD repeat domain 39 
PLRG1                 0.052   pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [...
TBL1Y                 0.050   transducin beta-like 1Y 
TBL1Y                 0.050   transducin beta-like 1Y 
TBL1Y                 0.050   transducin beta-like 1Y 
WDR5                  0.048   WD repeat domain 5 
WDR5                  0.048   WD repeat domain 5 
COPB2                 0.048   coatomer protein complex, subunit beta 2 (beta prime)...
TBL1X                 0.046   transducin beta-like 1X isoform b 
TBL1X                 0.046   transducin beta-like 1X isoform b 
TBL1X                 0.046   transducin beta-like 1X isoform a 
TBL1X                 0.046   transducin beta-like 1X isoform a 
WDSUB1                0.046   WD repeat, sterile alpha motif and U-box domain con...
WDSUB1                0.046   WD repeat, sterile alpha motif and U-box domain con...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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