Guide to the Human Genome
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Name: WDR33 Sequence: fasta or formatted (326aa) NCBI GI: 55743157
Description:

WD repeat domain 33 isoform 2

Referenced in:

WD Repeat Proteins

Other entries for this name:
alt prot [257aa] WD repeat domain 33 isoform 3
alt prot [1336aa] WD repeat domain 33 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         18           2
 C cysteine            1.8          6           1
 D aspartate           3.4         11           1
 E glutamate           3.4         11           1
 F phenylalanine       9.2         30           3
 G glycine             4.3         14           2
 H histidine           3.4         11           1
 I isoleucine          5.5         18           2
 K lysine              4.3         14           1
 L leucine             7.1         23           1
 M methionine          4.6         15           1
 N asparagine          6.1         20           2
 P proline             5.8         19           2
 Q glutamine           5.5         18           3
 R arginine            6.4         21           2
 S serine              4.9         16           2
 T threonine           5.5         18           2
 V valine              7.4         24           2
 W tryptophan          2.1          7           1
 Y tyrosine            3.7         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WD repeat domain 33 isoform 2 
WDR33                 0.630   WD repeat domain 33 isoform 3 
WDR33                 0.630   WD repeat domain 33 isoform 1 
WDR1                  0.029   WD repeat-containing protein 1 isoform 2 
WDR1                  0.029   WD repeat-containing protein 1 isoform 1 
WDR61                 0.029   WD repeat domain 61 
WDSUB1                0.024   WD repeat, sterile alpha motif and U-box domain con...
WDSUB1                0.024   WD repeat, sterile alpha motif and U-box domain con...
WDSUB1                0.024   WD repeat, sterile alpha motif and U-box domain con...
ATG16L1               0.021   APG16 autophagy 16-like isoform 1 
ATG16L1               0.021   APG16 autophagy 16-like isoform 2 
RBBP5                 0.021   retinoblastoma binding protein 5 
TAF5                  0.021   TBP-associated factor 5 
WDR27                 0.018   WD repeat domain 27 
WDR17                 0.018   WD repeat domain 17 isoform 2 
WDR17                 0.018   WD repeat domain 17 isoform 1 
CDC20B                0.018   CDC20 cell division cycle 20 homolog B isoform 1 [Ho...
CDC20B                0.018   CDC20 cell division cycle 20 homolog B isoform 2 [H...
TBL3                  0.018   transducin beta-like 3 
SMU1                  0.017   smu-1 suppressor of mec-8 and unc-52 homolog 
TEP1                  0.015   telomerase-associated protein 1 
WDR3                  0.015   WD repeat-containing protein 3 
NBEA                  0.015   neurobeachin 
NLE1                  0.015   Notchless gene homolog isoform a 
AHI1                  0.015   Abelson helper integration site 1 isoform b 
AHI1                  0.015   Abelson helper integration site 1 isoform a 
AHI1                  0.015   Abelson helper integration site 1 isoform a 
AHI1                  0.015   Abelson helper integration site 1 isoform a 
TAF5L                 0.015   PCAF associated factor 65 beta isoform a 
ATG16L2               0.015   ATG16 autophagy related 16-like 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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