TRAT1 32710

Name: TRAT1	Sequence: fasta or formatted (186aa)		NCBI GI: 54607137
Description: T-cell receptor interacting molecule		Referenced in: T cells
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 11 1 C cysteine 1.6 3 1 D aspartate 8.1 15 2 E glutamate 7.5 14 2 F phenylalanine 3.2 6 2 G glycine 4.3 8 1 H histidine 3.2 6 1 I isoleucine 6.5 12 1 K lysine 6.5 12 1 L leucine 7.5 14 2 M methionine 3.8 7 1 N asparagine 4.3 8 1 P proline 4.8 9 1 Q glutamine 4.8 9 1 R arginine 4.8 9 2 S serine 9.7 18 2 T threonine 4.3 8 2 V valine 4.3 8 1 W tryptophan 0.5 1 1 Y tyrosine 4.3 8 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 T-cell receptor interacting molecule LOC643677 0.023 hypothetical protein LOC643677 LOC643677 0.023 PREDICTED: hypothetical protein LOC643677 LOC643677 0.023 PREDICTED: hypothetical protein LOC643677 LOC643677 0.023 PREDICTED: hypothetical protein LOC643677 FAM129B 0.020 hypothetical protein LOC64855 isoform 1 FAM129B 0.020 hypothetical protein LOC64855 isoform 2 PITX1 0.014 paired-like homeodomain transcription factor 1 [Hom... ZCCHC6 0.014 zinc finger, CCHC domain containing 6 PITX2 0.014 paired-like homeodomain transcription factor 2 isofo... SIT1 0.014 SHP2-interacting transmembrane adaptor protein WDR61 0.014 WD repeat domain 61 PITX2 0.014 paired-like homeodomain transcription factor 2 isofo... PITX2 0.014 paired-like homeodomain transcription factor 2 isofo... ZDBF2 0.014 zinc finger, DBF-type containing 2 MLL 0.011 myeloid/lymphoid or mixed-lineage leukemia protein [... BRCA2 0.011 breast cancer 2, early onset PITX3 0.011 paired-like homeodomain 3 PJA2 0.011 praja 2, RING-H2 motif containing PLEKHG1 0.008 pleckstrin homology domain containing, family G (wit... MDN1 0.008 MDN1, midasin homolog RNF220 0.008 ring finger protein 220 SUV39H1 0.008 suppressor of variegation 3-9 homolog 1 PCDH15 0.008 protocadherin 15 isoform CD1-4 precursor PCDH15 0.008 protocadherin 15 isoform CD1-10 precursor PCDH15 0.008 protocadherin 15 isoform CD1-9 precursor PCDH15 0.008 protocadherin 15 isoform CD1-8 precursor PCDH15 0.008 protocadherin 15 isoform CD1-7 precursor PCDH15 0.008 protocadherin 15 isoform CD1-6 precursor PCDH15 0.008 protocadherin 15 isoform CD1-2 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.