Guide to the Human Genome
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Name: FAM129B Sequence: fasta or formatted (733aa) NCBI GI: 79750824
Description:

hypothetical protein LOC64855 isoform 2

Referenced in:

B cells

Other entries for this name:
alt prot [746aa] hypothetical protein LOC64855 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         49           2
 C cysteine            1.2          9           1
 D aspartate           4.0         29           1
 E glutamate           9.0         66           2
 F phenylalanine       3.5         26           2
 G glycine             5.9         43           4
 H histidine           2.5         18           1
 I isoleucine          4.4         32           2
 K lysine              5.9         43           2
 L leucine             9.8         72           2
 M methionine          2.9         21           2
 N asparagine          3.0         22           2
 P proline             7.4         54           3
 Q glutamine           6.4         47           2
 R arginine            5.2         38           3
 S serine              7.4         54           3
 T threonine           4.1         30           3
 V valine              6.5         48           2
 W tryptophan          1.1          8           1
 Y tyrosine            3.3         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC64855 isoform 2 
FAM129B               0.992   hypothetical protein LOC64855 isoform 1 
FAM129A               0.282   niban protein isoform 2 
FAM129C               0.121   B-cell novel protein 1 isoform b 
FAM129C               0.121   B-cell novel protein 1 isoform a 
LOC100291479          0.015   PREDICTED: hypothetical protein XP_002348186 
CIC                   0.015   capicua homolog 
INF2                  0.015   inverted formin 2 isoform 2 
INF2                  0.015   inverted formin 2 isoform 1 
TSC22D2               0.014   TSC22 domain family, member 2 
WBP11                 0.014   WW domain binding protein 11 
TTN                   0.013   titin isoform N2-A 
ALX3                  0.013   aristaless-like homeobox 3 
NR5A1                 0.013   nuclear receptor subfamily 5, group A, member 1 [Hom...
CCDC86                0.013   coiled-coil domain containing 86 
PCLO                  0.013   piccolo isoform 2 
PCLO                  0.013   piccolo isoform 1 
FMNL1                 0.013   formin-like 1 
PRR12                 0.013   proline rich 12 
SETD1A                0.012   SET domain containing 1A 
FLJ22184              0.012   PREDICTED: hypothetical protein FLJ22184 
DIDO1                 0.012   death inducer-obliterator 1 isoform c 
DGKK                  0.012   diacylglycerol kinase kappa 
SFPQ                  0.012   splicing factor proline/glutamine rich (polypyrimidin...
SF3A2                 0.012   splicing factor 3a, subunit 2 
TENC1                 0.012   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.012   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.012   tensin like C1 domain containing phosphatase isoform...
PRB4                  0.012   proline-rich protein BstNI subfamily 4 precursor [Ho...
NACA                  0.012   nascent polypeptide-associated complex alpha subuni...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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