PITX2 12919

Name: PITX2	Sequence: fasta or formatted (324aa)		NCBI GI: 21361183
Description: paired-like homeodomain transcription factor 2 isoform c		Referenced in: Homeobox and Related Proteins Left-Right Axis Pituitary
Other entries for this name: alt prot [317aa] paired-like homeodomain transcription factor 2 isoform b alt prot [271aa] paired-like homeodomain transcription factor 2 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.3 27 2 C cysteine 1.9 6 1 D aspartate 3.1 10 2 E glutamate 4.0 13 2 F phenylalanine 3.1 10 2 G glycine 4.0 13 1 H histidine 2.5 8 2 I isoleucine 0.9 3 1 K lysine 5.2 17 3 L leucine 7.4 24 1 M methionine 3.4 11 1 N asparagine 7.1 23 2 P proline 8.3 27 2 Q glutamine 5.6 18 2 R arginine 6.2 20 2 S serine 15.1 49 4 T threonine 4.6 15 1 V valine 4.9 16 1 W tryptophan 1.2 4 1 Y tyrosine 3.1 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 paired-like homeodomain transcription factor 2 isofo... PITX2 0.791 paired-like homeodomain transcription factor 2 isofo... PITX2 0.786 paired-like homeodomain transcription factor 2 isofo... PITX1 0.534 paired-like homeodomain transcription factor 1 [Hom... PITX3 0.428 paired-like homeodomain 3 ALX1 0.148 cartilage paired-class homeoprotein 1 ALX4 0.137 aristaless-like homeobox 4 ARX 0.131 aristaless related homeobox DRGX 0.126 dorsal root ganglia homeobox PAX7 0.124 paired box 7 isoform 3 PAX7 0.123 paired box 7 isoform 1 PAX7 0.123 paired box 7 isoform 2 ALX3 0.118 aristaless-like homeobox 3 RAX 0.118 retina and anterior neural fold homeobox PAX3 0.112 paired box 3 isoform PAX3i PAX3 0.112 paired box 3 isoform PAX3e PAX3 0.112 paired box 3 isoform PAX3d PAX3 0.112 paired box 3 isoform PAX3 PAX3 0.109 paired box 3 isoform PAX3g PAX3 0.109 paired box 3 isoform PAX3h OTP 0.107 PREDICTED: orthopedia homeobox DMBX1 0.107 diencephalon/mesencephalon homeobox 1 isoform b [Hom... OTP 0.107 orthopedia homeobox DMBX1 0.107 diencephalon/mesencephalon homeobox 1 isoform a [Hom... PRRX1 0.106 paired mesoderm homeobox 1 isoform pmx-1a PRRX1 0.106 paired mesoderm homeobox 1 isoform pmx-1b VSX2 0.102 visual system homeobox 2 VSX1 0.101 visual system homeobox 1 isoform a PHOX2B 0.099 paired-like homeobox 2b OTX1 0.098 orthodenticle homeobox 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.