PITX2 23663

Name: PITX2	Sequence: fasta or formatted (317aa)		NCBI GI: 24234708
Description: paired-like homeodomain transcription factor 2 isoform b		Referenced in: Homeobox and Related Proteins Left-Right Axis Pituitary
Other entries for this name: alt prot [324aa] paired-like homeodomain transcription factor 2 isoform c alt prot [271aa] paired-like homeodomain transcription factor 2 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.9 25 2 C cysteine 2.2 7 1 D aspartate 3.2 10 2 E glutamate 5.0 16 2 F phenylalanine 4.4 14 2 G glycine 3.8 12 1 H histidine 0.9 3 1 I isoleucine 0.9 3 1 K lysine 6.3 20 3 L leucine 6.3 20 1 M methionine 2.8 9 1 N asparagine 7.6 24 2 P proline 7.9 25 2 Q glutamine 6.0 19 2 R arginine 6.3 20 2 S serine 13.9 44 3 T threonine 4.4 14 1 V valine 5.7 18 1 W tryptophan 1.3 4 1 Y tyrosine 3.2 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 paired-like homeodomain transcription factor 2 isofo... PITX2 0.816 paired-like homeodomain transcription factor 2 isofo... PITX2 0.808 paired-like homeodomain transcription factor 2 isofo... PITX1 0.543 paired-like homeodomain transcription factor 1 [Hom... PITX3 0.440 paired-like homeodomain 3 ALX1 0.151 cartilage paired-class homeoprotein 1 ALX4 0.140 aristaless-like homeobox 4 ARX 0.132 aristaless related homeobox PAX7 0.130 paired box 7 isoform 3 PAX7 0.129 paired box 7 isoform 1 DRGX 0.129 dorsal root ganglia homeobox PAX7 0.127 paired box 7 isoform 2 ALX3 0.121 aristaless-like homeobox 3 RAX 0.121 retina and anterior neural fold homeobox PAX3 0.111 paired box 3 isoform PAX3i PAX3 0.111 paired box 3 isoform PAX3e PAX3 0.111 paired box 3 isoform PAX3d PAX3 0.111 paired box 3 isoform PAX3 PRRX1 0.111 paired mesoderm homeobox 1 isoform pmx-1a PRRX1 0.111 paired mesoderm homeobox 1 isoform pmx-1b PAX3 0.110 paired box 3 isoform PAX3g PAX3 0.110 paired box 3 isoform PAX3h DMBX1 0.110 diencephalon/mesencephalon homeobox 1 isoform a [Hom... DMBX1 0.110 diencephalon/mesencephalon homeobox 1 isoform b [Hom... OTP 0.106 PREDICTED: orthopedia homeobox OTP 0.106 orthopedia homeobox VSX2 0.103 visual system homeobox 2 PHOX2B 0.100 paired-like homeobox 2b OTX1 0.100 orthodenticle homeobox 1 PHOX2A 0.100 paired-like homeobox 2a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.