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Search of human proteins with 5454064
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5454064 RNA binding motif protein 14 [Homo sapiens]
(669 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5454064 RNA binding motif protein 14 [Homo sapiens] 1311 0.0
gi|13899354 RNA binding motif protein 4B [Homo sapiens] 143 6e-34
gi|93277122 RNA binding motif protein 4 [Homo sapiens] 140 3e-33
gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens] 84 5e-16
gi|253970504 Ewing sarcoma breakpoint region 1 isoform 4 [Homo s... 78 3e-14
gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma... 75 2e-13
gi|253970500 Ewing sarcoma breakpoint region 1 isoform 1 [Homo s... 75 3e-13
gi|253970506 Ewing sarcoma breakpoint region 1 isoform 5 [Homo s... 74 3e-13
gi|253970502 Ewing sarcoma breakpoint region 1 isoform 3 [Homo s... 74 3e-13
gi|4885225 Ewing sarcoma breakpoint region 1 isoform 2 [Homo sap... 74 3e-13
gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens] 72 1e-12
gi|242117971 RNA binding motif protein, X-linked-like 1 [Homo sa... 71 3e-12
gi|21361809 RNA binding motif protein, X-linked-like 1 [Homo sap... 71 3e-12
gi|4505255 musashi 1 [Homo sapiens] 71 4e-12
gi|56699409 RNA binding motif protein, X-linked [Homo sapiens] 69 2e-11
gi|153252068 testes-specific heterogenous nuclear ribonucleoprot... 67 7e-11
gi|154240738 RALY RNA binding protein-like isoform 2 [Homo sapiens] 65 3e-10
gi|154240740 RALY RNA binding protein-like isoform 2 [Homo sapiens] 65 3e-10
gi|154240712 RALY RNA binding protein-like isoform 2 [Homo sapiens] 65 3e-10
gi|154240692 RALY RNA binding protein-like isoform 1 [Homo sapiens] 65 3e-10
gi|57864582 hornerin [Homo sapiens] 64 6e-10
gi|208431836 poly A binding protein, cytoplasmic 4 isoform 3 [Ho... 63 8e-10
gi|4504715 poly A binding protein, cytoplasmic 4 isoform 2 [Homo... 63 8e-10
gi|208431833 poly A binding protein, cytoplasmic 4 isoform 1 [Ho... 63 8e-10
gi|4507499 TIA-1 related protein isoform 1 [Homo sapiens] 62 2e-09
gi|169173184 PREDICTED: hypothetical protein [Homo sapiens] 62 2e-09
gi|185135971 poly(A)-binding protein, cytoplasmic 1-like [Homo s... 62 2e-09
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 62 2e-09
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 62 2e-09
gi|188219593 TIA1 protein isoform 1 [Homo sapiens] 61 3e-09
>gi|5454064 RNA binding motif protein 14 [Homo sapiens]
Length = 669
Score = 1311 bits (3392), Expect = 0.0
Identities = 669/669 (100%), Positives = 669/669 (100%)
Query: 1 MKIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRENAGALRAIEALHGHEL 60
MKIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRENAGALRAIEALHGHEL
Sbjct: 1 MKIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRENAGALRAIEALHGHEL 60
Query: 61 RPGRALVVEMSRPRPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHME 120
RPGRALVVEMSRPRPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHME
Sbjct: 61 RPGRALVVEMSRPRPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHME 120
Query: 121 KEADAKAAIAQLNGKEVKGKRINVELSTKGQKKGPGLAVQSGDKTKKPGAGDTAFPGTGG 180
KEADAKAAIAQLNGKEVKGKRINVELSTKGQKKGPGLAVQSGDKTKKPGAGDTAFPGTGG
Sbjct: 121 KEADAKAAIAQLNGKEVKGKRINVELSTKGQKKGPGLAVQSGDKTKKPGAGDTAFPGTGG 180
Query: 181 FSATFDYQQAFGNSTGGFDGQARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQ 240
FSATFDYQQAFGNSTGGFDGQARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQ
Sbjct: 181 FSATFDYQQAFGNSTGGFDGQARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQ 240
Query: 241 PSVSLGAAYRAQPSASLGVGYRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAAS 300
PSVSLGAAYRAQPSASLGVGYRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAAS
Sbjct: 241 PSVSLGAAYRAQPSASLGVGYRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAAS 300
Query: 301 SLGPYGGAQPSASALSSYGGQAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRA 360
SLGPYGGAQPSASALSSYGGQAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRA
Sbjct: 301 SLGPYGGAQPSASALSSYGGQAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRA 360
Query: 361 AASSYNTQGAASSLGSYGAQAASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQ 420
AASSYNTQGAASSLGSYGAQAASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQ
Sbjct: 361 AASSYNTQGAASSLGSYGAQAASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQ 420
Query: 421 QAASYSSQPAAYVAQPATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASM 480
QAASYSSQPAAYVAQPATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASM
Sbjct: 421 QAASYSSQPAAYVAQPATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASM 480
Query: 481 GLSGSYGAQSAAAATGSYGAAAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAASY 540
GLSGSYGAQSAAAATGSYGAAAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAASY
Sbjct: 481 GLSGSYGAQSAAAATGSYGAAAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAASY 540
Query: 541 RGQPGNAYDGAGQPSAAYLSMSQGAVANANSTPPPYERTRLSPPRASYDDPYKKAVAMSK 600
RGQPGNAYDGAGQPSAAYLSMSQGAVANANSTPPPYERTRLSPPRASYDDPYKKAVAMSK
Sbjct: 541 RGQPGNAYDGAGQPSAAYLSMSQGAVANANSTPPPYERTRLSPPRASYDDPYKKAVAMSK 600
Query: 601 RYGSDRRLAELSDYRRLSESQLSFRRSPTKSSLDYRRLPDAHSDYARYSGSYNDYLRAAQ 660
RYGSDRRLAELSDYRRLSESQLSFRRSPTKSSLDYRRLPDAHSDYARYSGSYNDYLRAAQ
Sbjct: 601 RYGSDRRLAELSDYRRLSESQLSFRRSPTKSSLDYRRLPDAHSDYARYSGSYNDYLRAAQ 660
Query: 661 MHSGYQRRM 669
MHSGYQRRM
Sbjct: 661 MHSGYQRRM 669
>gi|13899354 RNA binding motif protein 4B [Homo sapiens]
Length = 359
Score = 143 bits (360), Expect = 6e-34
Identities = 117/361 (32%), Positives = 175/361 (48%), Gaps = 34/361 (9%)
Query: 1 MKIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRENAGALRAIEALHGHEL 60
+K+F+GN+ + T +E+ +LF YG V+ C ++K + FVH+ + A AI LH ++L
Sbjct: 2 VKLFIGNLP-REATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIRNLHHYKL 60
Query: 61 RPGRALVVEMSRPRPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHME 120
G + VE S+ + + K+ VGN+S CT+QELR+ FE G VIECD+VKDYAFVHME
Sbjct: 61 H-GVNINVEASKNKSKASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIVKDYAFVHME 119
Query: 121 KEADAKAAIAQLNGKEVKGKRINVELSTKGQKKGPGLAVQSG-DKTKKPGAGDTAFPGTG 179
+ DA AI L+ E +GKR++V+LST + PG+ QSG + K G P
Sbjct: 120 RAEDAVEAIRGLDNTEFQGKRMHVQLSTSRLRTAPGMGDQSGCYRCGKEGHWSKECP-VD 178
Query: 180 GFSATFDYQQAFGNSTGGFDGQARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRA 239
D+ + + G TP G S +Y A + R+
Sbjct: 179 RTGRVADFTEQYNEQYGAV------RTPYTMGYGESMYYND----AYGALDYYKRYRVRS 228
Query: 240 QPSVSLGAAYRAQPSASLGVGYRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAA 299
+V+ AA A A + + Q + S+ SV PY L P+S +AA
Sbjct: 229 YEAVAAAAAASAYNYAEQTMSHLPQVQSTTVTSHLNSTSVD---PYDRHLL-PNSGAAAT 284
Query: 300 SSLGPYGGAQPSASALSSYGGQ-----AAAASSLNSYGAQGSSLASYGNQPSSYGAQAAS 354
S+ +A+ SSY G+ AA+ L + G YG P S +QA++
Sbjct: 285 SA-----AMAAAAATTSSYYGRDRSPLRRAAAMLPTVG------EGYGYGPESELSQASA 333
Query: 355 S 355
+
Sbjct: 334 A 334
>gi|93277122 RNA binding motif protein 4 [Homo sapiens]
Length = 364
Score = 140 bits (354), Expect = 3e-33
Identities = 72/162 (44%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 1 MKIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRENAGALRAIEALHGHEL 60
+K+F+GN+ + T +E+ +LF YG V+ C ++K + FVH+ + A AI LH ++L
Sbjct: 2 VKLFIGNLP-REATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIRNLHHYKL 60
Query: 61 RPGRALVVEMSRPRPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHME 120
G + VE S+ + + K+ VGN+S CT++ELR+ FE G VIECD+VKDYAFVHME
Sbjct: 61 H-GVNINVEASKNKSKTSTKLHVGNISPTCTNKELRAKFEEYGPVIECDIVKDYAFVHME 119
Query: 121 KEADAKAAIAQLNGKEVKGKRINVELSTKGQKKGPGLAVQSG 162
+ DA AI L+ E +GKR++V+LST + PG+ QSG
Sbjct: 120 RAEDAVEAIRGLDNTEFQGKRMHVQLSTSRLRTAPGMGDQSG 161
Score = 30.8 bits (68), Expect = 4.2
Identities = 47/177 (26%), Positives = 71/177 (40%), Gaps = 24/177 (13%)
Query: 340 SYGNQ---PSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQAASYGAQSAASSLAYG 396
SYG+ ++YGA A RAA S AA+S+ +Y Q S Q +++A
Sbjct: 204 SYGDSLYYNNAYGALDAYYKRCRAARSYEAVAAAAASVYNYAEQTLSQLPQVQNTAMASH 263
Query: 397 AQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQPATAAAYASQPAAYAAQATTP 456
+ S + Y+ P + AA+ ++ AA A A + +Y + + +AT P
Sbjct: 264 LTSTSLD-----PYDRHLLP-TSGAAATAAAAAAAAAAVTAASTSYYGRDRSPLRRATAP 317
Query: 457 MAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATGSYGAAAAYGAQPSATLA 513
V T YG LS Q++AAA S A Y + A A
Sbjct: 318 ----------VPTVGEGYGYGHESELS-----QASAAARNSLYDMARYEREQYADRA 359
>gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens]
Length = 407
Score = 83.6 bits (205), Expect = 5e-16
Identities = 111/417 (26%), Positives = 158/417 (37%), Gaps = 75/417 (17%)
Query: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQ--------FAFVHMRENAGALRAIE 53
K+FVG +D + TT E L + F+ YG V+ C +MK F FV ++ + +
Sbjct: 11 KLFVGGLDWS-TTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKD-PNCVGTVL 68
Query: 54 ALHGHEL-------RPGRALVVEMSRPRPLNTW------------KIFVGNVSAACTSQE 94
A H L +P ++ R RP W KIFVG + C E
Sbjct: 69 ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETE 128
Query: 95 LRSLFERRGRVIECDVVKD--------YAFVHMEKEADAKAAIAQLNGKEVKGKRINVEL 146
LR F++ G V E ++ D + F+ E E A+ ++ ++ GK++ V+
Sbjct: 129 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV-NMHFHDIMGKKVEVKR 187
Query: 147 S----TKGQKKGPGLAVQSGDKTKKPGAGDTAFPGTGGFSATFDYQQAF---GNSTGGFD 199
+ +K Q G A Q G + A A + + Q + G + GG+
Sbjct: 188 AEPRDSKSQAPGQPGASQWGSRVVPNAANGWAGQPPPTWQQGYGPQGMWVPAGQAIGGYG 247
Query: 200 GQARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQPSASLGV 259
PP GR P PP SY+ ++ P + P Y A P S G
Sbjct: 248 -------PPPAGRGAPP--PPPPFTSYI--VSTPPGGF--PPPQGFPQGYGAPPQFSFGY 294
Query: 260 GYRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYG 319
G P A P + GA LA P S AA + AQP YG
Sbjct: 295 GPPPPPPDQFAPPGVPPPPATPGA---APLAFPPPPSQAAPDMSKPPTAQPD----FPYG 347
Query: 320 GQAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASS-------YNTQG 369
A L+ +G QG S S QP SYG + G A S +N QG
Sbjct: 348 QYAGYGQDLSGFG-QGFSDPS--QQPPSYGGPSVPGSGGPPAGGSGFGRGQNHNVQG 401
>gi|253970504 Ewing sarcoma breakpoint region 1 isoform 4 [Homo
sapiens]
Length = 600
Score = 77.8 bits (190), Expect = 3e-14
Identities = 79/254 (31%), Positives = 107/254 (42%), Gaps = 33/254 (12%)
Query: 312 ASALSSYGGQAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYG-----VRAAASSYN 366
AS S QAAA ++Y AQ + Y +YG Q+ +YG A +
Sbjct: 2 ASTDYSTYSQAAAQQGYSAYTAQPTQ--GYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTA 59
Query: 367 TQGAASSLGSYGAQAASYGAQSAASSLAYGAQAASYNA--QPSASYNAQSAPYAAQQAAS 424
T G + SYG Y +A + + Q A +A+ A YAAQ A
Sbjct: 60 TYGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSA-- 117
Query: 425 YSSQPA--AYVAQPATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGL 482
Y +QPA AY QPA A+ P +Y++ T S +Q Q +SYG Q+S G
Sbjct: 118 YGTQPAYPAYGQQPA-----ATAPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQ 172
Query: 483 SGSYGAQ---SAAAATGSYGAAAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAAS 539
SYG Q S TGSY A + +Q S++ Y QSS Q HP +
Sbjct: 173 QSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSS----YGQQSS-------FRQDHPSSMGV 221
Query: 540 YRGQPGNAYDGAGQ 553
Y GQ + G G+
Sbjct: 222 Y-GQESGGFSGPGE 234
Score = 55.1 bits (131), Expect = 2e-07
Identities = 75/248 (30%), Positives = 102/248 (41%), Gaps = 56/248 (22%)
Query: 173 TAFPGTGGFSATFDYQQAFGNSTGGFDGQ------ARQPTPPFFGRDRSPLRRSPPRASY 226
TA P T G++ T QA+G + G GQ + T +G+ P Y
Sbjct: 22 TAQP-TQGYAQT---TQAYGQQSYGTYGQPTDVSYTQAQTTATYGQTAYATSYGQPPTGY 77
Query: 227 VAPLTAQPATYRAQPSVSLGAAYRAQPSASLGVGY---RTQPMTAQAASYRAQPSVSLGA 283
P Q AY +QP G G T +T ASY AQ +
Sbjct: 78 TTPTAPQ--------------AY-SQPVQGYGTGAYDTTTATVTTTQASYAAQ------S 116
Query: 284 PYRGQLASPS-SQSAAASSLGPYGGAQPSASALSSYGGQAAAASSLNSYGAQGSSLASYG 342
Y Q A P+ Q AA++ Y QP++ SSY Q N+YG +SYG
Sbjct: 117 AYGTQPAYPAYGQQPAATAPTSYSSTQPTSYDQSSYSQQ-------NTYGQP----SSYG 165
Query: 343 NQPSSYGAQAASSYGVRAAASSYNTQGAASSLGS-YGAQAASYGAQSA------ASSLAY 395
Q SSYG Q SSYG + S G+ S S Y Q++SYG QS+ +S Y
Sbjct: 166 QQ-SSYGQQ--SSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVY 222
Query: 396 GAQAASYN 403
G ++ ++
Sbjct: 223 GQESGGFS 230
Score = 30.8 bits (68), Expect = 4.2
Identities = 28/93 (30%), Positives = 37/93 (39%), Gaps = 11/93 (11%)
Query: 112 KDYAFVHMEKEADAKAAIAQLNGKEVKGKRINVELSTKGQKKGP------GLAVQSGDKT 165
K A V E AKAA+ +GK+ +G ++ V L+ +KK P GL + G
Sbjct: 354 KGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLA---RKKPPMNSMRGGLPPREGRGM 410
Query: 166 KKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGF 198
P G G GG G GGF
Sbjct: 411 PPPLRGGPG--GPGGPGGPMGRMGGRGGDRGGF 441
>gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma)
[Homo sapiens]
Length = 526
Score = 75.1 bits (183), Expect = 2e-13
Identities = 71/250 (28%), Positives = 98/250 (39%), Gaps = 37/250 (14%)
Query: 308 AQPSASALSSYGGQAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNT 367
A S A + GQ + S YG Q S S S YG + SSYG ++ + Y T
Sbjct: 10 ATQSYGAYPTQPGQGYSQQSSQPYGQQSYSGYSQSTDTSGYGQSSYSSYG-QSQNTGYGT 68
Query: 368 QGAASSLGSYGAQAASYGAQSA----ASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAA 423
Q GS G +S +QS+ +S YG Q A + S ++QS+ Y Q+
Sbjct: 69 QSTPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGSSSQSSSYGQPQSG 128
Query: 424 SYSSQPAAYVAQPATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLN-SYGAQASMGL 482
SYS QP +Y Q +Y Q + YG Q Q N S G G
Sbjct: 129 SYSQQP-----------SYGGQQQSYGQQQSYNPPQGYGQ----QNQYNSSSGGGGGGGG 173
Query: 483 SGSYGAQSAAAATGSYGAAAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAASYRG 542
G+YG ++ ++G G+ YG Q QS + Y Q RG
Sbjct: 174 GGNYGQDQSSMSSGG-GSGGGYGNQ----------DQSGGGGSGGYGQQDR-----GGRG 217
Query: 543 QPGNAYDGAG 552
+ G+ G G
Sbjct: 218 RGGSGGGGGG 227
Score = 63.5 bits (153), Expect = 6e-10
Identities = 59/189 (31%), Positives = 75/189 (39%), Gaps = 18/189 (9%)
Query: 249 YRAQPSASLGVGYRTQPMTAQAASYRAQPSVSLGAP-YRGQLASPSSQSAAASSLGPYG- 306
Y Q + S G Y TQP Y Q S G Y G S + SS YG
Sbjct: 6 YTQQATQSYGA-YPTQP----GQGYSQQSSQPYGQQSYSGYSQSTDTSGYGQSSYSSYGQ 60
Query: 307 ------GAQPSASALSSYGGQAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRA 360
G Q + S GG ++ SS +SYG Q SS YG QP+ + + SYG +
Sbjct: 61 SQNTGYGTQSTPQGYGSTGGYGSSQSSQSSYGQQ-SSYPGYGQQPAP--SSTSGSYGSSS 117
Query: 361 AASSYNT--QGAASSLGSYGAQAASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYA 418
+SSY G+ S SYG Q SYG Q + + Q YN+
Sbjct: 118 QSSSYGQPQSGSYSQQPSYGGQQQSYGQQQSYNPPQGYGQQNQYNSSSGGGGGGGGGGNY 177
Query: 419 AQQAASYSS 427
Q +S SS
Sbjct: 178 GQDQSSMSS 186
Score = 35.0 bits (79), Expect = 0.22
Identities = 40/131 (30%), Positives = 57/131 (43%), Gaps = 15/131 (11%)
Query: 449 YAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSG-SYGAQSAAAATGSYGAAA--AYG 505
Y QAT SYGA P Q Y Q+S SY S + T YG ++ +YG
Sbjct: 6 YTQQATQ----SYGAYPTQPGQ--GYSQQSSQPYGQQSYSGYSQSTDTSGYGQSSYSSYG 59
Query: 506 AQPSATLAAPYRTQSSASLAASYAAQQHPQAAASYRGQPGNAYDGAG-QPSAAYLSMSQG 564
+ Y TQS+ S Q++ S GQ ++Y G G QP+ + S S G
Sbjct: 60 QSQNTG----YGTQSTPQGYGSTGGYGSSQSSQSSYGQQ-SSYPGYGQQPAPSSTSGSYG 114
Query: 565 AVANANSTPPP 575
+ + ++S P
Sbjct: 115 SSSQSSSYGQP 125
Score = 32.7 bits (73), Expect = 1.1
Identities = 32/113 (28%), Positives = 45/113 (39%), Gaps = 7/113 (6%)
Query: 91 TSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQLNGKEVKGKRINVELSTKG 150
T Q + +L+ R E +K A V + AKAAI +GKE G I V +T+
Sbjct: 317 TGQPMINLYTDR----ETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRR 372
Query: 151 QKKGPGLAVQSGDKTKKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGFDGQAR 203
G G + + G G GG + + F + GG GQ R
Sbjct: 373 ADFNRGGGNGRGGRGR---GGPMGRGGYGGGGSGGGGRGGFPSGGGGGGGQQR 422
>gi|253970500 Ewing sarcoma breakpoint region 1 isoform 1 [Homo
sapiens]
Length = 661
Score = 74.7 bits (182), Expect = 3e-13
Identities = 89/311 (28%), Positives = 127/311 (40%), Gaps = 61/311 (19%)
Query: 271 ASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPS------ASALSSYGGQAAA 324
++Y AQP+ Q + ++Q+ S G YG QP+ A ++YG A A
Sbjct: 19 SAYTAQPT---------QGYAQTTQAYGQQSYGTYG--QPTDVSYTQAQTTATYGQTAYA 67
Query: 325 ASSLNSYGAQGSSLA-SYGNQPSSYGAQAASSYGVRA----AASSYNTQGAASSLGSYGA 379
S +G+S + P +Y +Q YG A A+ TQ + ++ +YG
Sbjct: 68 TSYGQPPTVEGTSTGYTTPTAPQAY-SQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGT 126
Query: 380 QAA--SYGAQSAASSLA--YGAQAASYNAQPSAS---YNAQSAPYAAQQAASYSSQPAAY 432
Q A +YG Q AA++ + +QP +S YN S Y Q SY P +Y
Sbjct: 127 QPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYG-QSNYSYPQVPGSY 185
Query: 433 VAQPATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAA 492
QP TA P +Y P QP Q +SY Q + G SYG QS
Sbjct: 186 PMQPVTA------PPSY------PPTSYSSTQPTSYDQ-SSYSQQNTYGQPSSYGQQS-- 230
Query: 493 AATGSYGAAAAYGAQPSAT----------LAAPYRTQSSASLAASYAAQQHPQAAASYRG 542
SYG ++YG QP + + Y QSS+ S Q HP + Y G
Sbjct: 231 ----SYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVY-G 285
Query: 543 QPGNAYDGAGQ 553
Q + G G+
Sbjct: 286 QESGGFSGPGE 296
Score = 67.0 bits (162), Expect = 5e-11
Identities = 83/308 (26%), Positives = 116/308 (37%), Gaps = 38/308 (12%)
Query: 361 AASSYNTQGAASSLGSYGAQAASYGAQSAASSLAYGAQAASYNAQPS-ASYNAQSAPYAA 419
A++ Y+T A++ Y A A A ++ AYG Q+ QP+ SY A
Sbjct: 2 ASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYT------QA 55
Query: 420 QQAASYSSQPAAYVAQPATAAAYASQPAAYAAQA--TTPMAGSYGAQPVVQTQLNSYGAQ 477
Q A+Y Q A A +Y P TTP A +QPV +Y
Sbjct: 56 QTTATY--------GQTAYATSYGQPPTVEGTSTGYTTPTAPQAYSQPVQGYGTGAYDTT 107
Query: 478 AS--MGLSGSYGAQSAAAATGSYGAAAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQ 535
+ SY AQS A G+ A AYG QP+AT AP R Q + PQ
Sbjct: 108 TATVTTTQASYAAQS---AYGTQPAYPAYGQQPAAT--APTRPQDGNKPTET----SQPQ 158
Query: 536 AAASYRGQPGNAYDGAGQPSAAYLSMSQGAVANANSTPPPYERTRLSPPR-ASYDDPYKK 594
++ QP Y GQ + +Y + + PP Y T S + SYD +
Sbjct: 159 SSTGGYNQPSLGY---GQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYD---QS 212
Query: 595 AVAMSKRYGSDRRLAELSDYRRLSESQLSFRRSPTKSSLDYRRLPDAHSDYARYSGSYND 654
+ + YG + S Y + S ++ PT A S Y++ S SY
Sbjct: 213 SYSQQNTYGQPSSYGQQSSYGQQSSYG---QQPPTSYPPQTGSYSQAPSQYSQQSSSYGQ 269
Query: 655 YLRAAQMH 662
Q H
Sbjct: 270 QSSFRQDH 277
Score = 35.0 bits (79), Expect = 0.22
Identities = 37/142 (26%), Positives = 55/142 (38%), Gaps = 16/142 (11%)
Query: 193 NSTGGFD------GQARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRA-QPSVSL 245
+STGG++ GQ+ P G S P AP + P +Y + QP+
Sbjct: 159 SSTGGYNQPSLGYGQSNYSYPQVPG--------SYPMQPVTAPPSYPPTSYSSTQPTSYD 210
Query: 246 GAAYRAQPSASLGVGYRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPY 305
++Y Q + Y Q Q +SY QP S +PS S +SS G
Sbjct: 211 QSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQ 270
Query: 306 GG-AQPSASALSSYGGQAAAAS 326
Q S++ YG ++ S
Sbjct: 271 SSFRQDHPSSMGVYGQESGGFS 292
Score = 30.8 bits (68), Expect = 4.2
Identities = 28/93 (30%), Positives = 37/93 (39%), Gaps = 11/93 (11%)
Query: 112 KDYAFVHMEKEADAKAAIAQLNGKEVKGKRINVELSTKGQKKGP------GLAVQSGDKT 165
K A V E AKAA+ +GK+ +G ++ V L+ +KK P GL + G
Sbjct: 415 KGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLA---RKKPPMNSMRGGLPPREGRGM 471
Query: 166 KKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGF 198
P G G GG G GGF
Sbjct: 472 PPPLRGGPG--GPGGPGGPMGRMGGRGGDRGGF 502
>gi|253970506 Ewing sarcoma breakpoint region 1 isoform 5 [Homo
sapiens]
Length = 354
Score = 74.3 bits (181), Expect = 3e-13
Identities = 89/307 (28%), Positives = 121/307 (39%), Gaps = 67/307 (21%)
Query: 291 SPSSQSAAASSLGPYGGAQPS---ASALSSYGGQA------------AAASSLNSYGAQG 335
S SQ+AA Y AQP+ A +YG Q+ A + +YG Q
Sbjct: 7 STYSQAAAQQGYSAYT-AQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYG-QT 64
Query: 336 SSLASYGNQPSSYG--------AQAASSYGVRA----AASSYNTQGAASSLGSYGAQAA- 382
+ SYG P+ Y +Q YG A A+ TQ + ++ +YG Q A
Sbjct: 65 AYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAY 124
Query: 383 -SYGAQSAASSLA--YGAQAASYNAQPSAS---YNAQSAPYAAQQAASYSSQPAAYVAQP 436
+YG Q AA++ + +QP +S YN S Y Q SY P +Y QP
Sbjct: 125 PAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYG-QSNYSYPQVPGSYPMQP 183
Query: 437 ATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATG 496
TA P +Y P QP Q +SY Q + G SYG QS
Sbjct: 184 VTA------PPSY------PPTSYSSTQPTSYDQ-SSYSQQNTYGQPSSYGQQS------ 224
Query: 497 SYGAAAAYGAQPSAT----------LAAPYRTQSSASLAASYAAQQHPQAAASYRGQPGN 546
SYG ++YG QP + + Y QSS+ S Q HP + Y GQ
Sbjct: 225 SYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVY-GQESG 283
Query: 547 AYDGAGQ 553
+ G G+
Sbjct: 284 GFSGPGE 290
Score = 69.7 bits (169), Expect = 8e-12
Identities = 84/306 (27%), Positives = 117/306 (38%), Gaps = 40/306 (13%)
Query: 361 AASSYNTQGAASSLGSYGAQAASYGAQSAASSLAYGAQAASYNAQPS-ASYNAQSAPYAA 419
A++ Y+T A++ Y A A A ++ AYG Q+ QP+ SY A
Sbjct: 2 ASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYT------QA 55
Query: 420 QQAASYSSQPAAYVAQPATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQAS 479
Q A+Y Q A A +Y P Y TTP A +QPV +Y +
Sbjct: 56 QTTATY--------GQTAYATSYGQPPTGY----TTPTAPQAYSQPVQGYGTGAYDTTTA 103
Query: 480 --MGLSGSYGAQSAAAATGSYGAAAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAA 537
SY AQS A G+ A AYG QP+AT AP R Q + PQ++
Sbjct: 104 TVTTTQASYAAQS---AYGTQPAYPAYGQQPAAT--APTRPQDGNKPTET----SQPQSS 154
Query: 538 ASYRGQPGNAYDGAGQPSAAYLSMSQGAVANANSTPPPYERTRLSPPR-ASYDDPYKKAV 596
QP Y GQ + +Y + + PP Y T S + SYD + +
Sbjct: 155 TGGYNQPSLGY---GQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYD---QSSY 208
Query: 597 AMSKRYGSDRRLAELSDYRRLSESQLSFRRSPTKSSLDYRRLPDAHSDYARYSGSYNDYL 656
+ YG + S Y + S ++ PT A S Y++ S SY
Sbjct: 209 SQQNTYGQPSSYGQQSSYGQQSSYG---QQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQS 265
Query: 657 RAAQMH 662
Q H
Sbjct: 266 SFRQDH 271
Score = 35.4 bits (80), Expect = 0.17
Identities = 51/222 (22%), Positives = 74/222 (33%), Gaps = 35/222 (15%)
Query: 193 NSTGGFD------GQARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRA-QPSVSL 245
+STGG++ GQ+ P G S P AP + P +Y + QP+
Sbjct: 153 SSTGGYNQPSLGYGQSNYSYPQVPG--------SYPMQPVTAPPSYPPTSYSSTQPTSYD 204
Query: 246 GAAYRAQPSASLGVGYRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPY 305
++Y Q + Y Q Q +SY QP S P G + SQ + S
Sbjct: 205 QSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSY-PPQTGSYSQAPSQYSQQS----- 258
Query: 306 GGAQPSASALSSYGGQAA----AASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAA 361
SSYG Q++ SS+ YG + + G S G
Sbjct: 259 ----------SSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNRGRGRGGFD 308
Query: 362 ASSYNTQGAASSLGSYGAQAASYGAQSAASSLAYGAQAASYN 403
+ G G G Q+ S S Y + +N
Sbjct: 309 RGGMSRGGRGGGRGGMGLQSESLVYTSILKKYPYSVLSRQHN 350
>gi|253970502 Ewing sarcoma breakpoint region 1 isoform 3 [Homo
sapiens]
Length = 655
Score = 74.3 bits (181), Expect = 3e-13
Identities = 89/307 (28%), Positives = 121/307 (39%), Gaps = 67/307 (21%)
Query: 291 SPSSQSAAASSLGPYGGAQPS---ASALSSYGGQA------------AAASSLNSYGAQG 335
S SQ+AA Y AQP+ A +YG Q+ A + +YG Q
Sbjct: 7 STYSQAAAQQGYSAYT-AQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYG-QT 64
Query: 336 SSLASYGNQPSSYG--------AQAASSYGVRA----AASSYNTQGAASSLGSYGAQAA- 382
+ SYG P+ Y +Q YG A A+ TQ + ++ +YG Q A
Sbjct: 65 AYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAY 124
Query: 383 -SYGAQSAASSLA--YGAQAASYNAQPSAS---YNAQSAPYAAQQAASYSSQPAAYVAQP 436
+YG Q AA++ + +QP +S YN S Y Q SY P +Y QP
Sbjct: 125 PAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYG-QSNYSYPQVPGSYPMQP 183
Query: 437 ATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATG 496
TA P +Y P QP Q +SY Q + G SYG QS
Sbjct: 184 VTA------PPSY------PPTSYSSTQPTSYDQ-SSYSQQNTYGQPSSYGQQS------ 224
Query: 497 SYGAAAAYGAQPSAT----------LAAPYRTQSSASLAASYAAQQHPQAAASYRGQPGN 546
SYG ++YG QP + + Y QSS+ S Q HP + Y GQ
Sbjct: 225 SYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVY-GQESG 283
Query: 547 AYDGAGQ 553
+ G G+
Sbjct: 284 GFSGPGE 290
Score = 69.7 bits (169), Expect = 8e-12
Identities = 84/306 (27%), Positives = 117/306 (38%), Gaps = 40/306 (13%)
Query: 361 AASSYNTQGAASSLGSYGAQAASYGAQSAASSLAYGAQAASYNAQPS-ASYNAQSAPYAA 419
A++ Y+T A++ Y A A A ++ AYG Q+ QP+ SY A
Sbjct: 2 ASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYT------QA 55
Query: 420 QQAASYSSQPAAYVAQPATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQAS 479
Q A+Y Q A A +Y P Y TTP A +QPV +Y +
Sbjct: 56 QTTATY--------GQTAYATSYGQPPTGY----TTPTAPQAYSQPVQGYGTGAYDTTTA 103
Query: 480 --MGLSGSYGAQSAAAATGSYGAAAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAA 537
SY AQS A G+ A AYG QP+AT AP R Q + PQ++
Sbjct: 104 TVTTTQASYAAQS---AYGTQPAYPAYGQQPAAT--APTRPQDGNKPTET----SQPQSS 154
Query: 538 ASYRGQPGNAYDGAGQPSAAYLSMSQGAVANANSTPPPYERTRLSPPR-ASYDDPYKKAV 596
QP Y GQ + +Y + + PP Y T S + SYD + +
Sbjct: 155 TGGYNQPSLGY---GQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYD---QSSY 208
Query: 597 AMSKRYGSDRRLAELSDYRRLSESQLSFRRSPTKSSLDYRRLPDAHSDYARYSGSYNDYL 656
+ YG + S Y + S ++ PT A S Y++ S SY
Sbjct: 209 SQQNTYGQPSSYGQQSSYGQQSSYG---QQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQS 265
Query: 657 RAAQMH 662
Q H
Sbjct: 266 SFRQDH 271
Score = 35.0 bits (79), Expect = 0.22
Identities = 37/142 (26%), Positives = 55/142 (38%), Gaps = 16/142 (11%)
Query: 193 NSTGGFD------GQARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRA-QPSVSL 245
+STGG++ GQ+ P G S P AP + P +Y + QP+
Sbjct: 153 SSTGGYNQPSLGYGQSNYSYPQVPG--------SYPMQPVTAPPSYPPTSYSSTQPTSYD 204
Query: 246 GAAYRAQPSASLGVGYRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPY 305
++Y Q + Y Q Q +SY QP S +PS S +SS G
Sbjct: 205 QSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQ 264
Query: 306 GG-AQPSASALSSYGGQAAAAS 326
Q S++ YG ++ S
Sbjct: 265 SSFRQDHPSSMGVYGQESGGFS 286
Score = 30.8 bits (68), Expect = 4.2
Identities = 28/93 (30%), Positives = 37/93 (39%), Gaps = 11/93 (11%)
Query: 112 KDYAFVHMEKEADAKAAIAQLNGKEVKGKRINVELSTKGQKKGP------GLAVQSGDKT 165
K A V E AKAA+ +GK+ +G ++ V L+ +KK P GL + G
Sbjct: 409 KGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLA---RKKPPMNSMRGGLPPREGRGM 465
Query: 166 KKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGF 198
P G G GG G GGF
Sbjct: 466 PPPLRGGPG--GPGGPGGPMGRMGGRGGDRGGF 496
>gi|4885225 Ewing sarcoma breakpoint region 1 isoform 2 [Homo
sapiens]
Length = 656
Score = 74.3 bits (181), Expect = 3e-13
Identities = 89/307 (28%), Positives = 121/307 (39%), Gaps = 67/307 (21%)
Query: 291 SPSSQSAAASSLGPYGGAQPS---ASALSSYGGQA------------AAASSLNSYGAQG 335
S SQ+AA Y AQP+ A +YG Q+ A + +YG Q
Sbjct: 7 STYSQAAAQQGYSAYT-AQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYG-QT 64
Query: 336 SSLASYGNQPSSYG--------AQAASSYGVRA----AASSYNTQGAASSLGSYGAQAA- 382
+ SYG P+ Y +Q YG A A+ TQ + ++ +YG Q A
Sbjct: 65 AYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAY 124
Query: 383 -SYGAQSAASSLA--YGAQAASYNAQPSAS---YNAQSAPYAAQQAASYSSQPAAYVAQP 436
+YG Q AA++ + +QP +S YN S Y Q SY P +Y QP
Sbjct: 125 PAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYG-QSNYSYPQVPGSYPMQP 183
Query: 437 ATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATG 496
TA P +Y P QP Q +SY Q + G SYG QS
Sbjct: 184 VTA------PPSY------PPTSYSSTQPTSYDQ-SSYSQQNTYGQPSSYGQQS------ 224
Query: 497 SYGAAAAYGAQPSAT----------LAAPYRTQSSASLAASYAAQQHPQAAASYRGQPGN 546
SYG ++YG QP + + Y QSS+ S Q HP + Y GQ
Sbjct: 225 SYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVY-GQESG 283
Query: 547 AYDGAGQ 553
+ G G+
Sbjct: 284 GFSGPGE 290
Score = 69.7 bits (169), Expect = 8e-12
Identities = 84/306 (27%), Positives = 117/306 (38%), Gaps = 40/306 (13%)
Query: 361 AASSYNTQGAASSLGSYGAQAASYGAQSAASSLAYGAQAASYNAQPS-ASYNAQSAPYAA 419
A++ Y+T A++ Y A A A ++ AYG Q+ QP+ SY A
Sbjct: 2 ASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYT------QA 55
Query: 420 QQAASYSSQPAAYVAQPATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQAS 479
Q A+Y Q A A +Y P Y TTP A +QPV +Y +
Sbjct: 56 QTTATY--------GQTAYATSYGQPPTGY----TTPTAPQAYSQPVQGYGTGAYDTTTA 103
Query: 480 --MGLSGSYGAQSAAAATGSYGAAAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAA 537
SY AQS A G+ A AYG QP+AT AP R Q + PQ++
Sbjct: 104 TVTTTQASYAAQS---AYGTQPAYPAYGQQPAAT--APTRPQDGNKPTET----SQPQSS 154
Query: 538 ASYRGQPGNAYDGAGQPSAAYLSMSQGAVANANSTPPPYERTRLSPPR-ASYDDPYKKAV 596
QP Y GQ + +Y + + PP Y T S + SYD + +
Sbjct: 155 TGGYNQPSLGY---GQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYD---QSSY 208
Query: 597 AMSKRYGSDRRLAELSDYRRLSESQLSFRRSPTKSSLDYRRLPDAHSDYARYSGSYNDYL 656
+ YG + S Y + S ++ PT A S Y++ S SY
Sbjct: 209 SQQNTYGQPSSYGQQSSYGQQSSYG---QQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQS 265
Query: 657 RAAQMH 662
Q H
Sbjct: 266 SFRQDH 271
Score = 35.4 bits (80), Expect = 0.17
Identities = 46/199 (23%), Positives = 72/199 (36%), Gaps = 24/199 (12%)
Query: 193 NSTGGFD------GQARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRA-QPSVSL 245
+STGG++ GQ+ P G S P AP + P +Y + QP+
Sbjct: 153 SSTGGYNQPSLGYGQSNYSYPQVPG--------SYPMQPVTAPPSYPPTSYSSTQPTSYD 204
Query: 246 GAAYRAQPSASLGVGYRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPY 305
++Y Q + Y Q Q +SY QP S +PS S +SS G
Sbjct: 205 QSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQ 264
Query: 306 GG-AQPSASALSSYGGQAAAAS------SLNSYGAQGSSLASYGNQPSSYGAQAASSYGV 358
Q S++ YG ++ S S++ +G + S G + G+
Sbjct: 265 SSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGM 324
Query: 359 RAAA--SSYNTQGAASSLG 375
+A +N G G
Sbjct: 325 GSAGERGGFNKPGGPMDEG 343
Score = 30.8 bits (68), Expect = 4.2
Identities = 28/93 (30%), Positives = 37/93 (39%), Gaps = 11/93 (11%)
Query: 112 KDYAFVHMEKEADAKAAIAQLNGKEVKGKRINVELSTKGQKKGP------GLAVQSGDKT 165
K A V E AKAA+ +GK+ +G ++ V L+ +KK P GL + G
Sbjct: 410 KGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLA---RKKPPMNSMRGGLPPREGRGM 466
Query: 166 KKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGF 198
P G G GG G GGF
Sbjct: 467 PPPLRGGPG--GPGGPGGPMGRMGGRGGDRGGF 497
>gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens]
Length = 378
Score = 72.4 bits (176), Expect = 1e-12
Identities = 91/351 (25%), Positives = 134/351 (38%), Gaps = 61/351 (17%)
Query: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQ--------FAFVHMRENAGALRAIE 53
K+FVG +D + TT E L + F+ YG V+ C +MK F FV ++ + +
Sbjct: 11 KLFVGGLDWS-TTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKD-PNCVGTVL 68
Query: 54 ALHGHEL-------RPGRALVVEMSRPRPLNTW------------KIFVGNVSAACTSQE 94
A H L +P ++ R RP W KIFVG + C E
Sbjct: 69 ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETE 128
Query: 95 LRSLFERRGRVIECDVVKD--------YAFVHMEKEADAKAAIAQLNGKEVKGKRINVEL 146
LR F++ G V E ++ D + F+ E E A+ ++ ++ GK++ V+
Sbjct: 129 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV-NMHFHDIMGKKVEVKR 187
Query: 147 S----TKGQKKGPGLAVQSGDKTKKPGAGDTAFPGTGGFSATFDYQQAF---GNSTGGFD 199
+ +K Q G A Q G + A A + + Q + G + GG+
Sbjct: 188 AEPRDSKSQAPGQPGASQWGSRVVPNAANGWAGQPPPTWQQGYGPQGMWVPAGQAIGGYG 247
Query: 200 GQARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQPSASLGV 259
PP GR P PP SY+ ++ P + P Y A P S G
Sbjct: 248 -------PPPAGRGAPP--PPPPFTSYI--VSTPPGGF--PPPQGFPQGYGAPPQFSFGY 294
Query: 260 GYRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQP 310
G P A P + GA LA P S AA + AQP
Sbjct: 295 GPPPPPPDQFAPPGVPPPPATPGA---APLAFPPPPSQAAPDMSKPPTAQP 342
>gi|242117971 RNA binding motif protein, X-linked-like 1 [Homo
sapiens]
Length = 390
Score = 71.2 bits (173), Expect = 3e-12
Identities = 91/364 (25%), Positives = 140/364 (38%), Gaps = 45/364 (12%)
Query: 67 VVEMSRPRPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--------YAFVH 118
+VE RP K+F+G ++ + L ++F + GR++E ++KD +AFV
Sbjct: 1 MVEADRPG-----KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVT 55
Query: 119 MEKEADAKAAIAQLNGKEVKGKRINVELSTKGQ----KKGPGLAVQSGDKTKKPGAGDTA 174
E ADAK A +NGK + GK I VE +TK + GP +S + GAG
Sbjct: 56 FESPADAKDAARDMNGKSLDGKAIKVEQATKPSFERGRHGPPPPPRSRGPPRGFGAGRGG 115
Query: 175 FPGTGGFSATFDYQQAFGNSTGGFDGQARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQP 234
GT G + + G S +R P P R PPR+ +P + P
Sbjct: 116 SGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLP--------VKRGPPPRSGGPSPKRSAP 167
Query: 235 ATYRAQPSVSLGAAYRAQPSASLGVGYRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSS 294
+ S G A ++ S G R +P+ ++ Y + S SS
Sbjct: 168 SGLVRSSSGMGGRAPLSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTK-----DSYSS 222
Query: 295 QSAAASSLGPYGGAQPSASALSSYGGQAAAASSLNSYGAQG-SSLASYGNQPSSYGAQAA 353
+ +S P YG +SS + Y ++G YG +
Sbjct: 223 RDYPSSRDTRDYAPPPRDYTYRDYG----HSSSRDDYPSRGYGDRDGYGRDRDYSDHPSG 278
Query: 354 SSYGVRAAASSYNTQGAASSLGSYGAQAASYGAQS-----AASSLAYGAQAASYNAQPSA 408
SY SY + G + S SYG S ++S YG SY++ S
Sbjct: 279 GSY-----RDSYESYGNSRSAPLTRGPPPSYGGSSRYDDYSSSRDGYGGSRDSYSSSRSD 333
Query: 409 SYNA 412
Y++
Sbjct: 334 LYSS 337
>gi|21361809 RNA binding motif protein, X-linked-like 1 [Homo
sapiens]
Length = 390
Score = 71.2 bits (173), Expect = 3e-12
Identities = 91/364 (25%), Positives = 140/364 (38%), Gaps = 45/364 (12%)
Query: 67 VVEMSRPRPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--------YAFVH 118
+VE RP K+F+G ++ + L ++F + GR++E ++KD +AFV
Sbjct: 1 MVEADRPG-----KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVT 55
Query: 119 MEKEADAKAAIAQLNGKEVKGKRINVELSTKGQ----KKGPGLAVQSGDKTKKPGAGDTA 174
E ADAK A +NGK + GK I VE +TK + GP +S + GAG
Sbjct: 56 FESPADAKDAARDMNGKSLDGKAIKVEQATKPSFERGRHGPPPPPRSRGPPRGFGAGRGG 115
Query: 175 FPGTGGFSATFDYQQAFGNSTGGFDGQARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQP 234
GT G + + G S +R P P R PPR+ +P + P
Sbjct: 116 SGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLP--------VKRGPPPRSGGPSPKRSAP 167
Query: 235 ATYRAQPSVSLGAAYRAQPSASLGVGYRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSS 294
+ S G A ++ S G R +P+ ++ Y + S SS
Sbjct: 168 SGLVRSSSGMGGRAPLSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTK-----DSYSS 222
Query: 295 QSAAASSLGPYGGAQPSASALSSYGGQAAAASSLNSYGAQG-SSLASYGNQPSSYGAQAA 353
+ +S P YG +SS + Y ++G YG +
Sbjct: 223 RDYPSSRDTRDYAPPPRDYTYRDYG----HSSSRDDYPSRGYGDRDGYGRDRDYSDHPSG 278
Query: 354 SSYGVRAAASSYNTQGAASSLGSYGAQAASYGAQS-----AASSLAYGAQAASYNAQPSA 408
SY SY + G + S SYG S ++S YG SY++ S
Sbjct: 279 GSY-----RDSYESYGNSRSAPLTRGPPPSYGGSSRYDDYSSSRDGYGGSRDSYSSSRSD 333
Query: 409 SYNA 412
Y++
Sbjct: 334 LYSS 337
>gi|4505255 musashi 1 [Homo sapiens]
Length = 362
Score = 70.9 bits (172), Expect = 4e-12
Identities = 90/362 (24%), Positives = 142/362 (39%), Gaps = 53/362 (14%)
Query: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQ--------FAFVHMRENAGALRAIE 53
K+F+G + TT E L F +G V C VM+ F FV + AG + +
Sbjct: 21 KMFIGGLSW-QTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVL- 78
Query: 54 ALHGHELRPGRALVVEMSRPRPLN------TWKIFVGNVSAACTSQELRSLFERRGRVIE 107
A HEL + + +++ PR T KIFVG +S T ++++ FE+ G+V +
Sbjct: 79 AQSRHEL-DSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 137
Query: 108 CDVVKD--------YAFVHMEKEADAKAAIAQLNGKEVKGKRINVE-------LSTKGQK 152
++ D + FV E E D + +++ E+ K + + +S G
Sbjct: 138 AMLMFDKTTNRHRGFGFVTFESE-DIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSA 196
Query: 153 KGPGLAVQSGDKTKKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGFDGQARQPTPPFFGR 212
+G + G G G +P GF AT +++ G+ Q P F
Sbjct: 197 RGRSRVMPYGMDAFMLGIGMLGYP---GFQATTYASRSYTGLAPGYTYQF-----PEFRV 248
Query: 213 DRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQPSASLGVGYRTQPMTAQAAS 272
+R+PL P A + LTA P T + + AA + G G M S
Sbjct: 249 ERTPL----PSAPVLPELTAIPLTAYGPMAAAAAAA-----AVVRGTGSHPWTMAPPPGS 299
Query: 273 YRAQPSVSLGAPYRGQLA---SPSSQSAAASSLGPYGGAQPSASALSSYGGQAAAASSLN 329
++ LG G +A ++Q + SS PS S GG A + N
Sbjct: 300 TPSRTGGFLGTTSPGPMAELYGAANQDSGVSSYISAASPAPSTGFGHSLGGPLIATAFTN 359
Query: 330 SY 331
Y
Sbjct: 360 GY 361
Score = 32.3 bits (72), Expect = 1.5
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 75 PLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--------YAFVHMEKEADAK 126
P + K+F+G +S T + LR F + G V EC V++D + FV +A
Sbjct: 16 PHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVD 75
Query: 127 AAIAQLNGKEVKGKRINVELS 147
+AQ + E+ K I+ +++
Sbjct: 76 KVLAQ-SRHELDSKTIDPKVA 95
>gi|56699409 RNA binding motif protein, X-linked [Homo sapiens]
Length = 391
Score = 68.6 bits (166), Expect = 2e-11
Identities = 102/411 (24%), Positives = 153/411 (37%), Gaps = 78/411 (18%)
Query: 67 VVEMSRPRPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--------YAFVH 118
+VE RP K+F+G ++ + L ++F + GR++E ++KD +AFV
Sbjct: 1 MVEADRPG-----KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVT 55
Query: 119 MEKEADAKAAIAQLNGKEVKGKRINVELSTK----GQKKGPGLAVQS-----GDKTKKPG 169
E ADAK A +NGK + GK I VE +TK ++GP +S G + + G
Sbjct: 56 FESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGG 115
Query: 170 AGDT-AFPGTGGFSATFDYQQAFGNSTGGFDGQARQPTPPFFGRDRSPLRRSPPRASYVA 228
+G T P GG Y F S+ R P++R PP
Sbjct: 116 SGGTRGPPSRGGHMDDGGYSMNFNMSS---------------SRGPLPVKRGPP------ 154
Query: 229 PLTAQPATYRAQPSVSLGAAYRAQPSASLGVGYRTQPMTAQAASYRAQPSVSLGAPYRGQ 288
P + P R+ PS +S G+G R P++ SY P R
Sbjct: 155 PRSGGPPPKRSAPS--------GPVRSSSGMGGRA-PVSRGRDSYGGPPRREPLPSRRDV 205
Query: 289 LASPSSQSAAASSLGPYGGAQ-PSASALSSYG--------GQAAAASSLNSYGAQG-SSL 338
SP + S+ Y PS+ Y +SS + Y ++G S
Sbjct: 206 YLSP--RDDGYSTKDSYSSRDYPSSRDTRDYAPPPRDYTYRDYGHSSSRDDYPSRGYSDR 263
Query: 339 ASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQAASYGAQS-----AASSL 393
YG + SY SY + G + S SYG S ++S
Sbjct: 264 DGYGRDRDYSDHPSGGSY-----RDSYESYGNSRSAPPTRGPPPSYGGSSRYDDYSSSRD 318
Query: 394 AYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQPATAAAYAS 444
YG SY++ S Y++ Q+ S Y P +Y+S
Sbjct: 319 GYGGSRDSYSSSRSDLYSSGRDRVGRQERGLPPSMERGY---PPPRDSYSS 366
Score = 34.7 bits (78), Expect = 0.29
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 10/78 (12%)
Query: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQ--------FAFVHMRENAGALRAIE 53
K+F+G ++ +T + L A+F YG ++ +MK FAFV A A A
Sbjct: 9 KLFIGGLN-TETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 54 ALHGHELRPGRALVVEMS 71
++G L G+A+ VE +
Sbjct: 68 DMNGKSL-DGKAIKVEQA 84
>gi|153252068 testes-specific heterogenous nuclear ribonucleoprotein
G-T [Homo sapiens]
Length = 392
Score = 66.6 bits (161), Expect = 7e-11
Identities = 96/365 (26%), Positives = 131/365 (35%), Gaps = 75/365 (20%)
Query: 67 VVEMSRPRPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--------YAFVH 118
+VE RP K+F+G ++ + L + F + GR++E ++KD +AFV
Sbjct: 1 MVEADRPG-----KLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVT 55
Query: 119 MEKEADAKAAIAQLNGKEVKGKRINVELSTK----GQKKGPGLAVQSGDK-----TKKPG 169
E ADAKAA +NGK + GK I V +TK ++GP G T+ G
Sbjct: 56 FESPADAKAAARDMNGKSLDGKAIKVAQATKPAFESSRRGPPPPRSRGRPRFLRGTRGGG 115
Query: 170 AGDTAFPGTGGFSATFDYQQAFGNSTGGFDGQARQPTPPFFGRDRSPLRRSPPRASYVAP 229
G P GG G T FD + R P++R PP P
Sbjct: 116 GGPRRSPSRGG-------PDDDGGYTADFDLRP--------SRAPMPMKRGPP------P 154
Query: 230 LTAQPATYRAQPSVSLGAAYRAQPSASLGVGYRTQPMTAQ-----AASYRAQPSVSLGAP 284
P RA PS P+ S G G R + + + + R +P P
Sbjct: 155 RRVGPPPKRAAPS---------GPARSSGGGMRGRALAVRGRDGYSGPPRREPLPPRRDP 205
Query: 285 YRGQLASPSSQSAAASSLG---PYGGA-QPSASALSSYGGQAA-------AASSLNSYGA 333
Y G S SS P G A P YG + S + YG
Sbjct: 206 YLGPRDEGYSSRDGYSSRDYREPRGFAPSPGEYTHRDYGHSSVRDDCPLRGYSDRDGYGG 265
Query: 334 QGS------SLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQAASYGAQ 387
+ S S+ SYG ++ G R SY G Y A S G
Sbjct: 266 RDRDYGDHLSRGSHREPFESYGELRGAAPG-RGTPPSYGGGGRYEEYRGYSPDAYSGGRD 324
Query: 388 SAASS 392
S +SS
Sbjct: 325 SYSSS 329
>gi|154240738 RALY RNA binding protein-like isoform 2 [Homo sapiens]
Length = 291
Score = 64.7 bits (156), Expect = 3e-10
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 29/200 (14%)
Query: 67 VVEMSRPRPLNTWKIFVGNVSAACTSQ-ELRSLFERRGRVIECDVVKDYAFVHMEKEADA 125
V + P+ +N+ ++F+GN++ A + ++ ++F + G+++ C V K YAFV E A
Sbjct: 10 VTNKNDPKSINS-RVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFVQYMSERHA 68
Query: 126 KAAIAQLNGKEVKGKRINVELS--TKGQKKGPG----LAVQSGDKTKKPGAGDTAFPGTG 179
+AA+A N + + G+ +++ ++ K + PG L+ ++K+P F G
Sbjct: 69 RAAVAGENARVIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEP------FLSVG 122
Query: 180 GFSATFD-YQQAFGNSTGGFDGQARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYR 238
G+ +D Y+ F N FD R P PP R PL+R P A T R
Sbjct: 123 GYVFDYDYYRDDFYNRL--FDYHGRVPPPP---RAVIPLKR---------PRVAVTTTRR 168
Query: 239 AQPSVSLGAAYRAQPSASLG 258
+ S+ R+ S S G
Sbjct: 169 GKGVFSMKGGSRSTASGSTG 188
Score = 41.6 bits (96), Expect = 0.002
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRENAGALRAIEALHGHELR 61
++F+GN++ A ++ A+F+ YG ++ C+V K +AFV A RA A +
Sbjct: 22 RVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFVQYMSERHA-RAAVAGENARVI 80
Query: 62 PGRALVVEMS------RPRPLN 77
G+ L + M+ RP+P N
Sbjct: 81 AGQPLDINMAGEPKPYRPKPGN 102
>gi|154240740 RALY RNA binding protein-like isoform 2 [Homo sapiens]
Length = 291
Score = 64.7 bits (156), Expect = 3e-10
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 29/200 (14%)
Query: 67 VVEMSRPRPLNTWKIFVGNVSAACTSQ-ELRSLFERRGRVIECDVVKDYAFVHMEKEADA 125
V + P+ +N+ ++F+GN++ A + ++ ++F + G+++ C V K YAFV E A
Sbjct: 10 VTNKNDPKSINS-RVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFVQYMSERHA 68
Query: 126 KAAIAQLNGKEVKGKRINVELS--TKGQKKGPG----LAVQSGDKTKKPGAGDTAFPGTG 179
+AA+A N + + G+ +++ ++ K + PG L+ ++K+P F G
Sbjct: 69 RAAVAGENARVIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEP------FLSVG 122
Query: 180 GFSATFD-YQQAFGNSTGGFDGQARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYR 238
G+ +D Y+ F N FD R P PP R PL+R P A T R
Sbjct: 123 GYVFDYDYYRDDFYNRL--FDYHGRVPPPP---RAVIPLKR---------PRVAVTTTRR 168
Query: 239 AQPSVSLGAAYRAQPSASLG 258
+ S+ R+ S S G
Sbjct: 169 GKGVFSMKGGSRSTASGSTG 188
Score = 41.6 bits (96), Expect = 0.002
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRENAGALRAIEALHGHELR 61
++F+GN++ A ++ A+F+ YG ++ C+V K +AFV A RA A +
Sbjct: 22 RVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFVQYMSERHA-RAAVAGENARVI 80
Query: 62 PGRALVVEMS------RPRPLN 77
G+ L + M+ RP+P N
Sbjct: 81 AGQPLDINMAGEPKPYRPKPGN 102
>gi|154240712 RALY RNA binding protein-like isoform 2 [Homo sapiens]
Length = 291
Score = 64.7 bits (156), Expect = 3e-10
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 29/200 (14%)
Query: 67 VVEMSRPRPLNTWKIFVGNVSAACTSQ-ELRSLFERRGRVIECDVVKDYAFVHMEKEADA 125
V + P+ +N+ ++F+GN++ A + ++ ++F + G+++ C V K YAFV E A
Sbjct: 10 VTNKNDPKSINS-RVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFVQYMSERHA 68
Query: 126 KAAIAQLNGKEVKGKRINVELS--TKGQKKGPG----LAVQSGDKTKKPGAGDTAFPGTG 179
+AA+A N + + G+ +++ ++ K + PG L+ ++K+P F G
Sbjct: 69 RAAVAGENARVIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEP------FLSVG 122
Query: 180 GFSATFD-YQQAFGNSTGGFDGQARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYR 238
G+ +D Y+ F N FD R P PP R PL+R P A T R
Sbjct: 123 GYVFDYDYYRDDFYNRL--FDYHGRVPPPP---RAVIPLKR---------PRVAVTTTRR 168
Query: 239 AQPSVSLGAAYRAQPSASLG 258
+ S+ R+ S S G
Sbjct: 169 GKGVFSMKGGSRSTASGSTG 188
Score = 41.6 bits (96), Expect = 0.002
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRENAGALRAIEALHGHELR 61
++F+GN++ A ++ A+F+ YG ++ C+V K +AFV A RA A +
Sbjct: 22 RVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFVQYMSERHA-RAAVAGENARVI 80
Query: 62 PGRALVVEMS------RPRPLN 77
G+ L + M+ RP+P N
Sbjct: 81 AGQPLDINMAGEPKPYRPKPGN 102
>gi|154240692 RALY RNA binding protein-like isoform 1 [Homo sapiens]
Length = 304
Score = 64.7 bits (156), Expect = 3e-10
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 29/200 (14%)
Query: 67 VVEMSRPRPLNTWKIFVGNVSAACTSQ-ELRSLFERRGRVIECDVVKDYAFVHMEKEADA 125
V + P+ +N+ ++F+GN++ A + ++ ++F + G+++ C V K YAFV E A
Sbjct: 23 VTNKNDPKSINS-RVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFVQYMSERHA 81
Query: 126 KAAIAQLNGKEVKGKRINVELS--TKGQKKGPG----LAVQSGDKTKKPGAGDTAFPGTG 179
+AA+A N + + G+ +++ ++ K + PG L+ ++K+P F G
Sbjct: 82 RAAVAGENARVIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEP------FLSVG 135
Query: 180 GFSATFD-YQQAFGNSTGGFDGQARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYR 238
G+ +D Y+ F N FD R P PP R PL+R P A T R
Sbjct: 136 GYVFDYDYYRDDFYNRL--FDYHGRVPPPP---RAVIPLKR---------PRVAVTTTRR 181
Query: 239 AQPSVSLGAAYRAQPSASLG 258
+ S+ R+ S S G
Sbjct: 182 GKGVFSMKGGSRSTASGSTG 201
Score = 41.6 bits (96), Expect = 0.002
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRENAGALRAIEALHGHELR 61
++F+GN++ A ++ A+F+ YG ++ C+V K +AFV A RA A +
Sbjct: 35 RVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFVQYMSERHA-RAAVAGENARVI 93
Query: 62 PGRALVVEMS------RPRPLN 77
G+ L + M+ RP+P N
Sbjct: 94 AGQPLDINMAGEPKPYRPKPGN 115
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 63.5 bits (153), Expect = 6e-10
Identities = 76/313 (24%), Positives = 127/313 (40%), Gaps = 32/313 (10%)
Query: 267 TAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGGQAAAAS 326
+ Q++SY S S A RG+ S S QS G G PS +G + +S
Sbjct: 861 SGQSSSYGQHESASHHASGRGRHGSGSGQSPGHGQRGSGSGQSPS---YGRHGSGSGRSS 917
Query: 327 SLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAA-ASSYNTQGAASSL-------GSYG 378
S +G+ + +G++ SS + + +G + +SSY G+ S GS
Sbjct: 918 SSGRHGSGSGQSSGFGHKSSSGQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRSEQHGSSS 977
Query: 379 AQAASYGAQSAAS--SLAYGAQAASYNAQPS------ASYNAQSAPYAAQQAAS-YSSQP 429
++SYG + S SL +G + PS S + QS+ Y ++ S +SS
Sbjct: 978 GSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYRSGSGWSSSR 1037
Query: 430 AAYVAQPATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQ 489
Y + ++ + + + GS Q S Q+S G +GA
Sbjct: 1038 GPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSS--CGQHGAS 1095
Query: 490 SAAAAT-GSYGA----AAAYGAQPSATLAAPYRTQ--SSASLAASYAAQQHPQAAASYRG 542
S +++ G +G+ ++ YG Q S + +P Q S + + SY +S G
Sbjct: 1096 SGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSG 1155
Query: 543 QPGNAYDGAGQPS 555
Q G+ G G+ S
Sbjct: 1156 QHGS---GLGESS 1165
Score = 63.2 bits (152), Expect = 8e-10
Identities = 74/292 (25%), Positives = 129/292 (44%), Gaps = 37/292 (12%)
Query: 283 APYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGGQAAAASSLNSYGAQGSSLASYG 342
+P RG+ S S QS SS GP+G +S+ Y + +S L ++ + YG
Sbjct: 542 SPSRGRHESGSRQS---SSYGPHGYGSGRSSSRGPYESGSGHSSGLGHQESRSGQSSGYG 598
Query: 343 NQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGA---QAASYGAQSAASSLA--YGA 397
SS G +S++G +T G +SS G +GA Q++S+G + SS + YG
Sbjct: 599 QHGSSSG--HSSTHGQHG-----STSGQSSSCGQHGATSGQSSSHGQHGSGSSQSSRYGQ 651
Query: 398 QAASYNAQPSA-------SYNAQSAPYAAQQAASYSSQPAAYVAQPATAAAYAS---QPA 447
Q + PS +++ + + S S+ P V+ ++ + S Q +
Sbjct: 652 QGSGSGQSPSRGRHGSDFGHSSSYGQHGSGSGWSSSNGPHGSVSGQSSGFGHKSGSGQSS 711
Query: 448 AYAAQATTPMAGS----YGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATGSYGAAAA 503
Y+ + S +G++ ++ +G +S GLS SYG +GS+ ++
Sbjct: 712 GYSQHGSGSSHSSGYRKHGSRSGQSSRSEQHG--SSSGLSSSYGQH----GSGSH-QSSG 764
Query: 504 YGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAASYRGQPGNAYDGAGQPS 555
+G Q S + +P R + +S S + QH + S G+ G+GQ S
Sbjct: 765 HGRQGSGSGHSPSRVRHGSSSGHSSSHGQH-GSGTSCSSSCGHYESGSGQAS 815
Score = 62.4 bits (150), Expect = 1e-09
Identities = 77/307 (25%), Positives = 120/307 (39%), Gaps = 31/307 (10%)
Query: 267 TAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGGQAAAAS 326
+ Q++SY Q S S + RGQ S S QS G G S S GQ++ S
Sbjct: 173 SGQSSSYGEQNSDSHQSSGRGQCGSGSGQSPNYGQHGSGSGQSSSNDTHGSGSGQSSGFS 232
Query: 327 SLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGA--ASSLGSYGAQAASY 384
S Q S + +G+ G+ +S YG + S +++G SS GS ++SY
Sbjct: 233 QHKSSSGQSSGYSQHGS-----GSGHSSGYGQHGSRSGQSSRGERHRSSSGS----SSSY 283
Query: 385 GAQSAAS--SLAYGAQAASYNAQPSASYNAQSAPYAAQ-----QAASYSSQPAAYVAQPA 437
G + S SL +G Q + PS + + +++ +SYS Y +
Sbjct: 284 GQHGSGSRQSLGHGRQGSGSRQSPSHVRHGSGSGHSSSHGQHGSGSSYSYSRGHYESGSG 343
Query: 438 TAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATGS 497
+ + + + GS Q Q S QAS SG +G+ S
Sbjct: 344 QTSGFGQHESGSGQSSGYSKHGSGSGHSSSQGQHGSTSGQASS--SGQHGSSSR------ 395
Query: 498 YGAAAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAA--ASYRGQPGNAYDGAGQPS 555
+++YG SA+ + R Q S+ S Q + + GQ G + G S
Sbjct: 396 --QSSSYGQHESASRHSSGRGQHSSGSGQSPGHGQRGSGSGQSPSSGQHGTGF-GRSSSS 452
Query: 556 AAYLSMS 562
Y+S S
Sbjct: 453 GPYVSGS 459
Score = 62.0 bits (149), Expect = 2e-09
Identities = 76/305 (24%), Positives = 128/305 (41%), Gaps = 28/305 (9%)
Query: 267 TAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGGQAAAAS 326
++Q++SY Q S S +P RG+ S S S SS G +G +S+ +G + +S
Sbjct: 2283 SSQSSSYGQQGSGSGQSPSRGRHGSGSGHS---SSYGQHGSGSGWSSSSGRHGSGSGQSS 2339
Query: 327 SLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQAASYGA 386
+ + SS S G G+ +SSY + S +++G GS ++SYG
Sbjct: 2340 GFGHH--ESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRGERH--GSSSGSSSSYGQ 2395
Query: 387 QSAAS--SLAYGAQAASYNAQPS------ASYNAQSAPYAAQQAAS-YSSQPAAYVAQPA 437
+ S SL +G + PS S + QS+ Y+ + S +SS Y +
Sbjct: 2396 HGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGPYESGSG 2455
Query: 438 TAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAAT-G 496
++ + + + GS Q S Q+S G +GA S +++ G
Sbjct: 2456 HSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSS--CGQHGASSGQSSSHG 2513
Query: 497 SYGA----AAAYGAQPSATLAAPYRTQ--SSASLAASYAAQQHPQAAASYRGQPGNAYDG 550
+G+ ++ YG Q S + +P Q S + + SY +S GQ G+ G
Sbjct: 2514 QHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGS---G 2570
Query: 551 AGQPS 555
G+ S
Sbjct: 2571 LGESS 2575
Score = 60.8 bits (146), Expect = 4e-09
Identities = 76/305 (24%), Positives = 126/305 (41%), Gaps = 28/305 (9%)
Query: 267 TAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGGQAAAAS 326
++Q++SY Q S S +P RG+ S S S SS G +G +S+ +G + +S
Sbjct: 1813 SSQSSSYGQQGSGSGQSPSRGRHGSGSGHS---SSYGQHGSGSGWSSSSGRHGSGSGQSS 1869
Query: 327 SLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQAASYGA 386
+ + SS S G G+ +SSY + S +++G GS ++SYG
Sbjct: 1870 GFGHH--ESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRG--EQHGSSSGSSSSYGQ 1925
Query: 387 QSAAS--SLAYGAQAASYNAQPS------ASYNAQSAPYAAQQAAS-YSSQPAAYVAQPA 437
+ S SL +G + PS S + QS+ Y + S +SS Y +
Sbjct: 1926 HGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYGSGSGWSSSRGPYESGSG 1985
Query: 438 TAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAAT-G 496
++ + + + GS Q S Q+S G +GA S +++ G
Sbjct: 1986 HSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSASGQSSS--CGQHGASSGQSSSHG 2043
Query: 497 SYGA----AAAYGAQPSATLAAPYRTQ--SSASLAASYAAQQHPQAAASYRGQPGNAYDG 550
+G+ ++ YG Q S + +P Q S + + SY +S GQ G G
Sbjct: 2044 QHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHG---PG 2100
Query: 551 AGQPS 555
G+ S
Sbjct: 2101 LGESS 2105
Score = 60.1 bits (144), Expect = 7e-09
Identities = 72/295 (24%), Positives = 122/295 (41%), Gaps = 24/295 (8%)
Query: 260 GYRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYG 319
G R + ++SY S S + GQ S S QS + S G +G +S+ S YG
Sbjct: 2380 GERHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSR-GRHGSGSGQSSSYSPYG 2438
Query: 320 GQAAAASSLNSYGAQGSSLASYGN------QPSSYGAQAASSYGVRAAASSYNTQGAASS 373
+ +SS Y + + G+ Q S YG +SS +T G +SS
Sbjct: 2439 SGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSS 2498
Query: 374 LGSYGA---QAASYGAQSAASSLA--YGAQAASYNAQPS----ASYNAQSAPYAAQQAAS 424
G +GA Q++S+G + SS + YG Q + P S + QS Y + S
Sbjct: 2499 CGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGS 2558
Query: 425 -YSSQPAAYVAQPATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLS 483
SS + + ++ + ++ ++ GS Q S Q+S G
Sbjct: 2559 GRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRG-- 2616
Query: 484 GSYGAQSAAAA-TGSYGA----AAAYGAQPSATLAAPYRTQSSASLAASYAAQQH 533
+G+ S +++ G +G+ ++ +G Q S + +P R + + L S + QH
Sbjct: 2617 ERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQH 2671
Score = 59.7 bits (143), Expect = 8e-09
Identities = 91/435 (20%), Positives = 166/435 (38%), Gaps = 32/435 (7%)
Query: 134 GKEVKGKRINVELSTKGQKKGPGLAVQSGDKTKKPGAGDTAFP---GTGGFSATFDYQQA 190
G+ G R ++ G G + G G + P G+G S+ Y+
Sbjct: 1924 GQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYGSGSGWSSSRGPYESG 1983
Query: 191 FGNSTGGFDGQARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYR 250
G+S+G ++R +G+ S S + + + + S +++
Sbjct: 1984 SGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSASGQSSSCGQHGASSGQSSSHG 2043
Query: 251 AQPS-ASLGVGYRTQPM-TAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGP---- 304
S +S GY Q + Q+ + + S S +P G+ S S +S+++ GP
Sbjct: 2044 QHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGPGLGE 2103
Query: 305 ---YGGAQPSASALSSYGGQAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAA 361
+G + S+ SSY + + + YG GS + SS G + SS G +
Sbjct: 2104 SSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSR-----SGQSSRGERHGSSSG---S 2155
Query: 362 ASSYNTQGAASSLGS-YGAQAASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQ 420
+S Y G+ S S +G Q + G + G+ +S + Q + S+ +
Sbjct: 2156 SSRYGQHGSGSRQSSGHGRQGSGSGHSPSRGRHGSGSGHSSSHGQHGSGSGRSSSRGPYE 2215
Query: 421 QAASYSSQPAAYVAQPATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASM 480
+ +SS + + ++AY+ + + GS Q Q S S
Sbjct: 2216 SRSGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGS-----ST 2270
Query: 481 GLSGSYGAQSAAAATGSYGAAAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAASY 540
G S S+G + ++ S +YG Q S + +P R + + S + QH + + +
Sbjct: 2271 GQSSSHGQHGSGSSQSS-----SYGQQGSGSGQSPSRGRHGSGSGHSSSYGQH-GSGSGW 2324
Query: 541 RGQPGNAYDGAGQPS 555
G G+GQ S
Sbjct: 2325 SSSSGRHGSGSGQSS 2339
Score = 59.3 bits (142), Expect = 1e-08
Identities = 116/545 (21%), Positives = 202/545 (37%), Gaps = 57/545 (10%)
Query: 147 STKGQKKGPGLAVQSGDKTKKPGAGDTAFPGTGGFSATFDY----QQAFGNSTGGFDGQA 202
S G G G Q G ++ + G+ G S+ + +Q+ G+S G G
Sbjct: 483 SGSGHSSGHG---QHGSRSGQSSRGERQGSSAGSSSSYGQHGSGSRQSLGHSRHG-SGSG 538
Query: 203 RQPTPPFFGRDRSPLRRSPPRA--SYVAPLTAQPATYRAQPSVSLGAAYRAQPSA-SLGV 259
+ P+P GR S R+S Y + ++ Y + S G ++ S S G
Sbjct: 539 QSPSPSR-GRHESGSRQSSSYGPHGYGSGRSSSRGPYESGSGHSSGLGHQESRSGQSSGY 597
Query: 260 GYRTQPM------------TAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGG 307
G + Q++S + S + GQ S SSQS+ G G
Sbjct: 598 GQHGSSSGHSSTHGQHGSTSGQSSSCGQHGATSGQSSSHGQHGSGSSQSSRYGQQGSGSG 657
Query: 308 AQPSASALSSYGGQAAAASSLNSYGAQGSSLA-SYGNQPSSYGAQAASSYGVRAA---AS 363
PS S G + +SYG GS S N P + +S +G ++ +S
Sbjct: 658 QSPSRGRHGSDFGHS------SSYGQHGSGSGWSSSNGPHGSVSGQSSGFGHKSGSGQSS 711
Query: 364 SYNTQGAASSLGSYGAQAASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAA 423
Y+ G+ SS S + S QS+ S + S + S + QS+ + Q +
Sbjct: 712 GYSQHGSGSSHSSGYRKHGSRSGQSSRSEQHGSSSGLSSSYGQHGSGSHQSSGHGRQGSG 771
Query: 424 SYSSQPAAYVAQPATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLS 483
S S + +++ ++S + + T + S G Q + +G S
Sbjct: 772 SGHSPSR---VRHGSSSGHSSSHGQHG--SGTSCSSSCGHYESGSGQASGFGQHES---G 823
Query: 484 GSYGAQSAAAATGSYGAAAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAASYRGQ 543
G +A+G + + +G+ S ++ + SS+ ++SY + AS RG+
Sbjct: 824 SGQGYSQHGSASGHFSSQGRHGS-TSGQSSSSGQHDSSSGQSSSYGQHESASHHASGRGR 882
Query: 544 PGNAYDGAGQPSAAYLSMSQGAVANANSTPPPYERTRLSPPRASYDDPYKKAVAMSKRYG 603
G+ G+GQ S G + + P Y R R+S + S +G
Sbjct: 883 HGS---GSGQ------SPGHGQRGSGSGQSPSYGRHGSGSGRSSSSGRHGSGSGQSSGFG 933
Query: 604 SDRRLAELSDYRRL---SESQLSFRRSPTKSSLDYRRLPDAHSDYARYSGSYNDYLRAAQ 660
+ S Y + S S+ + ++S R + H + S SY + ++
Sbjct: 934 HKSSSGQSSGYTQHGSGSGHSSSYEQHGSRSGQSSR--SEQHGSSSGSSSSYGQHGSGSR 991
Query: 661 MHSGY 665
G+
Sbjct: 992 QSLGH 996
Score = 57.4 bits (137), Expect = 4e-08
Identities = 73/305 (23%), Positives = 127/305 (41%), Gaps = 28/305 (9%)
Query: 267 TAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGGQAAAAS 326
++Q++ Y + S +P RG+ S S S SS G +G +S+ +G + +S
Sbjct: 1343 SSQSSGYGRHGAGSGQSPSRGRHGSGSGHS---SSYGQHGSGSGWSSSSGRHGSGSGQSS 1399
Query: 327 SLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQAASYGA 386
+ + SS S G G+ +SSY + S +++G GS ++SYG
Sbjct: 1400 GFGHH--ESSSWQSSGCTQHGSGSGHSSSYEQHGSRSGQSSRGERH--GSSSGSSSSYGQ 1455
Query: 387 QSAAS--SLAYGAQAASYNAQPS------ASYNAQSAPYAAQQAAS-YSSQPAAYVAQPA 437
+ S SL +G + PS S + QS+ Y+ + S +SS Y + +
Sbjct: 1456 HGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGPYESGSS 1515
Query: 438 TAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAAT-G 496
++ + + + GS Q S Q+S G +GA S +++ G
Sbjct: 1516 HSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSS--CGQHGASSGQSSSHG 1573
Query: 497 SYGA----AAAYGAQPSATLAAPYRTQ--SSASLAASYAAQQHPQAAASYRGQPGNAYDG 550
+G+ ++ YG Q S + +P Q S + + SY +S GQ G+ G
Sbjct: 1574 QHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGS---G 1630
Query: 551 AGQPS 555
G+ S
Sbjct: 1631 LGESS 1635
Score = 56.6 bits (135), Expect = 7e-08
Identities = 73/335 (21%), Positives = 132/335 (39%), Gaps = 42/335 (12%)
Query: 260 GYRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYG 319
G R + ++SY S S + GQ S S QS + S G +G +S+ S YG
Sbjct: 1440 GERHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSR-GRHGSGSGQSSSYSPYG 1498
Query: 320 GQAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYN--------TQGAA 371
+ +SS Y + S + G++ S G +S YG ++S ++ T G +
Sbjct: 1499 SGSGWSSSRGPYESGSSHSSGLGHRESRSGQ--SSGYGQHGSSSGHSSTHGQHGSTSGQS 1556
Query: 372 SSLGSYGA----------------QAASYGAQSAASSLAYGAQAASYNAQPSASYNAQSA 415
SS G +GA Q++ YG Q + S + G ++ S SY +
Sbjct: 1557 SSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGS 1616
Query: 416 PYAAQQAASYSSQPAAYVAQPATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYG 475
+ SS + + ++ + ++ ++ GS Q S
Sbjct: 1617 ------GSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRS 1670
Query: 476 AQASMGLSGSYGAQSAAAAT-GSYGA----AAAYGAQPSATLAAPYRTQSSASLAASYAA 530
Q+S G +G+ S +++ G +G+ ++ +G Q S + +P R + + L S +
Sbjct: 1671 GQSSRG--ERHGSSSRSSSRYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSH 1728
Query: 531 QQHPQAAASYRGQPGNAYDGAGQPSAAYLSMSQGA 565
QH + S R Y+ S+ + G+
Sbjct: 1729 GQH--GSGSGRSSSRGPYESRSGHSSVFGQHESGS 1761
Score = 55.8 bits (133), Expect = 1e-07
Identities = 92/438 (21%), Positives = 166/438 (37%), Gaps = 38/438 (8%)
Query: 134 GKEVKGKRINVELSTKGQKKGPGLAVQSGDKTKKPGAGDTAFP---GTGGFSATFDYQQA 190
G+ G R ++ G G + G G + P G+G S+ Y+
Sbjct: 984 GQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYRSGSGWSSSRGPYESG 1043
Query: 191 FGNSTGGFDGQARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAA-- 248
G+S+G ++R +G+ S S + + T+ ++ Q S G +
Sbjct: 1044 SGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGS--TSGQSSSCGQHGASSGQSSS 1101
Query: 249 ---YRAQPSASLGVGYRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGP- 304
+ + S S G G R + Q+ + + S S +P G+ S S +S+++ G
Sbjct: 1102 HGQHGSGSSQSSGYG-RQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSG 1160
Query: 305 ------YGGAQPSASALSSYGGQAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGV 358
+G + S+ SSY + + + YG GS + SS G + SS G
Sbjct: 1161 LGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSR-----SGQSSRGERHGSSSG- 1214
Query: 359 RAAASSYNTQGAASSLGS-YGAQAASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPY 417
++S Y G+ S S +G Q + G + G +S + Q + S+
Sbjct: 1215 --SSSHYGQHGSGSRQSSGHGRQGSGSGHSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRG 1272
Query: 418 AAQQAASYSSQPAAYVAQPATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQ 477
+ + +SS + + ++AY+ + + GS Q Q S
Sbjct: 1273 PYESRSGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGS---- 1328
Query: 478 ASMGLSGSYGAQSAAAATGSYGAAAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAA 537
S G S SYG + + ++ S YG + + +P R + + S + QH +
Sbjct: 1329 -STGQSSSYGHRGSGSSQSS-----GYGRHGAGSGQSPSRGRHGSGSGHSSSYGQH-GSG 1381
Query: 538 ASYRGQPGNAYDGAGQPS 555
+ + G G+GQ S
Sbjct: 1382 SGWSSSSGRHGSGSGQSS 1399
Score = 53.5 bits (127), Expect = 6e-07
Identities = 96/442 (21%), Positives = 169/442 (38%), Gaps = 40/442 (9%)
Query: 134 GKEVKGKRINVELSTKGQKKGPGLAVQSGDKTKKPGAGDTAFP---GTGGFSATFDYQQA 190
G+ G R ++ G G + G G + P G+G S+ Y+
Sbjct: 2394 GQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGPYESG 2453
Query: 191 FGNSTGGFDGQARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAA-- 248
G+S+G ++R +G+ S S + + T+ ++ Q S G +
Sbjct: 2454 SGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGS--TSGQSSSCGQHGASSGQSSS 2511
Query: 249 ---YRAQPSASLGVGYRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGP- 304
+ + S S G G R + Q+ + + S S +P G+ S S +S+++ G
Sbjct: 2512 HGQHGSGSSQSSGYG-RQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSG 2570
Query: 305 ------YGGAQPSASALSSYGGQAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGV 358
+G + S+ SSY + + + YG GS + SS G + SS G
Sbjct: 2571 LGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSR-----SGQSSRGERHGSSSG- 2624
Query: 359 RAAASSYNTQGAASSLGS-YGAQAASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPY 417
++S Y G+ S S +G Q + G + G +S + Q + S+
Sbjct: 2625 --SSSHYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRG 2682
Query: 418 AAQQAASYSSQPAAYVAQPATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQ 477
+ +SS + + ++AY+ + + GS Q Q S
Sbjct: 2683 PYESRLGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGS---- 2738
Query: 478 ASMGLSGSYGAQ-SAAAATGSYGAAAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQA 536
S G S SYG + S ++ + YG +GA +L+ R S + ++SY
Sbjct: 2739 -STGQSSSYGHRGSGSSQSSGYG---RHGAGSGQSLSHG-RHGSGSGQSSSYGQHGSGSG 2793
Query: 537 AASYRGQPGNAYDGAGQPSAAY 558
+S Q G+ G+GQ +Y
Sbjct: 2794 QSSGYSQHGS---GSGQDGYSY 2812
Score = 51.6 bits (122), Expect = 2e-06
Identities = 92/407 (22%), Positives = 154/407 (37%), Gaps = 42/407 (10%)
Query: 147 STKGQKKGPGLAVQSGDKTKKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGFDGQARQPT 206
S GQ G Q G + + + DT G+G S ++ + G S+G +
Sbjct: 197 SGSGQSPNYG---QHGSGSGQSSSNDTHGSGSGQSSGFSQHKSSSGQSSGYSQHGSGSGH 253
Query: 207 PPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQPSASLGVGYRTQPM 266
+G+ S +S R + ++Y S S SLG G R
Sbjct: 254 SSGYGQHGSRSGQSS-RGERHRSSSGSSSSYGQHGSGS---------RQSLGHG-RQGSG 302
Query: 267 TAQAASYRAQPSVSLGAPYRGQLASPSSQ----------SAAASSLGPYGGAQPSASALS 316
+ Q+ S+ S S + GQ S SS S S G + +S S
Sbjct: 303 SRQSPSHVRHGSGSGHSSSHGQHGSGSSYSYSRGHYESGSGQTSGFGQHESGSGQSSGYS 362
Query: 317 SYGGQAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGS 376
+G + +SS +G+ +S G SS ++ +SSYG +AS +++ S GS
Sbjct: 363 KHGSGSGHSSSQGQHGSTSGQASSSGQHGSS--SRQSSSYGQHESASRHSSGRGQHSSGS 420
Query: 377 YGAQAASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQP 436
Q+ +G + + S G +S ++ S PY + + YSS + +
Sbjct: 421 --GQSPGHGQRGSGS----GQSPSSGQHGTGFGRSSSSGPYVS--GSGYSSGFGHHESSS 472
Query: 437 ATAAAYASQPAAYAAQATTPMAGSYGAQPV-VQTQLNSYGAQASMGLSGSYGAQSAAAAT 495
++ Y + + GS Q + Q +S G+ +S G GS QS +
Sbjct: 473 EHSSGYTQHGSGSGHSSGHGQHGSRSGQSSRGERQGSSAGSSSSYGQHGSGSRQSLGHSR 532
Query: 496 GSYGAAAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAASYRG 542
G+ G PS + R +S + ++SY + +S RG
Sbjct: 533 HGSGS----GQSPSPSRG---RHESGSRQSSSYGPHGYGSGRSSSRG 572
Score = 46.6 bits (109), Expect = 7e-05
Identities = 97/463 (20%), Positives = 175/463 (37%), Gaps = 60/463 (12%)
Query: 178 TGGFSATFDYQQAFGNSTGGFDGQARQPT----PPFFGRDRSPLRRSPPRASYVAPLTAQ 233
T G S+TFD + G+STG + + +G+ S +SP R + + +
Sbjct: 1786 TSGQSSTFDQE---GSSTGQSSSHGQHGSGSSQSSSYGQQGSGSGQSPSRGRHGSG-SGH 1841
Query: 234 PATYRAQPS----VSLGAAYRAQPSASLGVGYRTQPM------------TAQAASYRAQP 277
++Y S S + + S G G+ + ++SY
Sbjct: 1842 SSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHG 1901
Query: 278 SVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGGQA--AAASSLNSYGAQG 335
S S G RG+ S S ++SS G +G + +G + + + S +G+
Sbjct: 1902 SRS-GQSSRGE--QHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGS 1958
Query: 336 SSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLG---SYGAQAASYGAQSAAS- 391
+SYG P G+ +SS G + S G +S LG S Q++ YG ++S
Sbjct: 1959 GQSSSYG--PYGSGSGWSSSRGPYESGS-----GHSSGLGHRESRSGQSSGYGQHGSSSG 2011
Query: 392 -SLAYGAQAASYNAQPSASYNAQSAPYAAQ--QAASYSSQPAAYVAQPATAAAYASQPAA 448
S +G ++ S + S+ ++ Q S SSQ + Y Q + +
Sbjct: 2012 HSSTHGQHGSASGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQR 2071
Query: 449 YAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYG-AQSAAAATGSY-------GA 500
+ +P G +G+ + +G +G S +G +S++ + SY G
Sbjct: 2072 GSGSRQSPSYGRHGSGSGRSSSSGQHG--PGLGESSGFGHHESSSGQSSSYSQHGSGSGH 2129
Query: 501 AAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAASYRGQPGNAYDGAGQPSAAYLS 560
++ YG S + + + +S +S QH + G G G+G S
Sbjct: 2130 SSGYGQHGSRSGQSSRGERHGSSSGSSSRYGQHGSGSRQSSGH-GRQGSGSGH------S 2182
Query: 561 MSQGAVANANSTPPPYERTRLSPPRASYDDPYKKAVAMSKRYG 603
S+G + + + + R+S PY+ S +G
Sbjct: 2183 PSRGRHGSGSGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFG 2225
Score = 46.2 bits (108), Expect = 1e-04
Identities = 100/471 (21%), Positives = 171/471 (36%), Gaps = 55/471 (11%)
Query: 176 PGTGGFSATFDYQQAFGNSTGGFDGQARQPTPPFFGRDRSPLRRSPPRA-----SYVAPL 230
PGT S +Q+ F + GQ+ +G S +S R S +P
Sbjct: 150 PGTESISRRLSFQRDFSGQHNSYSGQSSS-----YGEQNSDSHQSSGRGQCGSGSGQSPN 204
Query: 231 TAQPATYRAQPSVSLGAAYRAQPSASLGVGYRTQPMTAQAASYRAQPSVSLGAPYRGQLA 290
Q + Q S + + S+ + + + Q++ Y S S + GQ
Sbjct: 205 YGQHGSGSGQSSSNDTHGSGSGQSSGFS---QHKSSSGQSSGYSQHGSGSGHSSGYGQHG 261
Query: 291 SPSSQSAAASSLGPYGGAQPSASALSSYGGQAAAASSLNSYGAQGS-SLASYGNQPSSYG 349
S S QS+ + S+ + SSYG + + +G QGS S S + G
Sbjct: 262 SRSGQSSRGER------HRSSSGSSSSYGQHGSGSRQSLGHGRQGSGSRQSPSHVRHGSG 315
Query: 350 AQAASSYGVRAAASSYNTQGAASSLGS-----YGAQAASYGAQSAASSLAYGA------- 397
+ +SS+G + SSY+ GS +G + G S S G+
Sbjct: 316 SGHSSSHGQHGSGSSYSYSRGHYESGSGQTSGFGQHESGSGQSSGYSKHGSGSGHSSSQG 375
Query: 398 QAASYNAQPSAS-----YNAQSAPYAAQQAASYSSQPAAYVAQPATAAAYASQPAAYAAQ 452
Q S + Q S+S + QS+ Y ++AS S + + + Q + + Q
Sbjct: 376 QHGSTSGQASSSGQHGSSSRQSSSYGQHESASRHSSGRGQHSSGSGQSPGHGQRGSGSGQ 435
Query: 453 ATTPMAGSYGAQPVVQTQLNSY--GAQASMGLSGSYGAQSAAAATGSYGAAAAYGA---- 506
+P +G +G + Y G+ S G + ++ +G+ + + +
Sbjct: 436 --SPSSGQHGTGFGRSSSSGPYVSGSGYSSGFGHHESSSEHSSGYTQHGSGSGHSSGHGQ 493
Query: 507 --QPSATLAAPYRTQSSASLAASYAAQQHPQAAASYRGQPGNAYDGAGQPSAAYLSMSQG 564
S + R SSA ++SY Q + R G++ G+G S S S+G
Sbjct: 494 HGSRSGQSSRGERQGSSAGSSSSYG-----QHGSGSRQSLGHSRHGSG--SGQSPSPSRG 546
Query: 565 AVANANSTPPPYERTRLSPPRASYDDPYKKAVAMSKRYG-SDRRLAELSDY 614
+ + Y R+S PY+ S G + R + S Y
Sbjct: 547 RHESGSRQSSSYGPHGYGSGRSSSRGPYESGSGHSSGLGHQESRSGQSSGY 597
Score = 45.8 bits (107), Expect = 1e-04
Identities = 95/491 (19%), Positives = 179/491 (36%), Gaps = 104/491 (21%)
Query: 269 QAASYRAQPSVSLGAPYRGQLASP----------SSQSAAASSLGPYGGAQPSASALSSY 318
Q++ + Q S S +P RG+ S S S +SS GPY +S +
Sbjct: 1228 QSSGHGRQGSGSGHSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQH 1287
Query: 319 GGQAAAASSLNSYGAQGSSLASYGNQPSSYGA-----QAASSYGVRAAASSYNTQGAASS 373
+ +S+ + +G+ S G S+ G Q SS G +SSY +G+ SS
Sbjct: 1288 ESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTG---QSSSYGHRGSGSS 1344
Query: 374 LGSYGAQAASYGAQSAAS---------------SLAYGAQAA----SYNAQPSASYNAQS 414
Q++ YG A S S +YG + S ++ S + QS
Sbjct: 1345 ------QSSGYGRHGAGSGQSPSRGRHGSGSGHSSSYGQHGSGSGWSSSSGRHGSGSGQS 1398
Query: 415 APYAAQQAASY---------------------------SSQPAAYVAQPATAAAYA---- 443
+ + +++S+ SS+ + + ++++Y
Sbjct: 1399 SGFGHHESSSWQSSGCTQHGSGSGHSSSYEQHGSRSGQSSRGERHGSSSGSSSSYGQHGS 1458
Query: 444 --------SQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAAT 495
Q + + Q+ +P G +G+ + + YG + G S S G + ++
Sbjct: 1459 GSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYG--SGSGWSSSRGPYESGSSH 1516
Query: 496 GS--------YGAAAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAA--ASYRGQPG 545
S G ++ YG S++ + Q ++ S + QH ++ +S GQ G
Sbjct: 1517 SSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHG 1576
Query: 546 NAYDGAG----QPSAAYLSMSQGAVANANSTPPPYERTRLSPPRASYDDPYKKAVAMSKR 601
+ + Q S + S G + + P Y R R+S + + S
Sbjct: 1577 SGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSG 1636
Query: 602 YG----SDRRLAELSDYRRLSESQLSFRRSPTKSSLDYRRLPDAHSDYARYSGSYNDYLR 657
+G S + + S + S + + ++S R + H +R S Y +
Sbjct: 1637 FGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSR--GERHGSSSRSSSRYGQHGS 1694
Query: 658 AAQMHSGYQRR 668
++ SG+ R+
Sbjct: 1695 GSRQSSGHGRQ 1705
Score = 45.8 bits (107), Expect = 1e-04
Identities = 68/322 (21%), Positives = 129/322 (40%), Gaps = 51/322 (15%)
Query: 269 QAASYRAQPSVSLGAPYRGQLASPSSQSAA----------ASSLGPYGGAQPSASALSSY 318
Q++ + Q S S +P RG+ S S S++ +SS GPY +S +
Sbjct: 2168 QSSGHGRQGSGSGHSPSRGRHGSGSGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQH 2227
Query: 319 GGQAAAASSLNSYGAQGSSLASYGNQPSSYGA-----QAASSYGVRAAASSYNTQGAASS 373
+ +S+ + +G+ S G S+ G Q SS G +SS+ G+ SS
Sbjct: 2228 ESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTG---QSSSHGQHGSGSS 2284
Query: 374 LGSYGAQAASYGAQSAAS---------------SLAYGAQAA----SYNAQPSASYNAQS 414
Q++SYG Q + S S +YG + S ++ S + QS
Sbjct: 2285 ------QSSSYGQQGSGSGQSPSRGRHGSGSGHSSSYGQHGSGSGWSSSSGRHGSGSGQS 2338
Query: 415 APYAAQQAASYSSQPAAYVAQPATAAAYASQPAAYAAQATTPMAGS-YGAQPVVQTQLNS 473
+ + +++S+ S + Q + + ++S + +++ G +G+ +
Sbjct: 2339 SGFGHHESSSWQS---SGYTQHGSGSGHSSSYEQHGSRSGQSSRGERHGSSSGSSSSYGQ 2395
Query: 474 YGAQASMGLS-GSYGAQSAAAATGSYGAAAAYGAQPSATLAAPYRTQSS-ASLAASYAAQ 531
+G+ + L G +G+ S + + S G + Q S+ +PY + S +S Y +
Sbjct: 2396 HGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSS--YSPYGSGSGWSSSRGPYESG 2453
Query: 532 QHPQAAASYRGQPGNAYDGAGQ 553
+ +R G GQ
Sbjct: 2454 SGHSSGLGHRESRSGQSSGYGQ 2475
Score = 44.7 bits (104), Expect = 3e-04
Identities = 73/346 (21%), Positives = 138/346 (39%), Gaps = 73/346 (21%)
Query: 269 QAASYRAQPSVSLGAPYRGQLASP----------SSQSAAASSLGPYGGAQPSASALSSY 318
Q++ + Q S S +P RG+ S S S +SS GPY +S +
Sbjct: 1698 QSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQH 1757
Query: 319 GGQAAAASSLNSYGAQGSSLASYGNQPSSYGA-----QAASSYGVRAAASSYNTQGAASS 373
+ +S+ + +G+ S G S+ G Q SS G +SS+ G+ SS
Sbjct: 1758 ESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTG---QSSSHGQHGSGSS 1814
Query: 374 LGSYGAQAASYGAQSAAS---------------SLAYGAQAA----SYNAQPSASYNAQS 414
Q++SYG Q + S S +YG + S ++ S + QS
Sbjct: 1815 ------QSSSYGQQGSGSGQSPSRGRHGSGSGHSSSYGQHGSGSGWSSSSGRHGSGSGQS 1868
Query: 415 APYAAQQAASYSSQPAAYVAQPATAAAYASQPAAYAAQATTPMAG-SYGAQPVVQTQLNS 473
+ + +++S+ S + Q + + ++S + +++ G +G+ +
Sbjct: 1869 SGFGHHESSSWQS---SGYTQHGSGSGHSSSYEQHGSRSGQSSRGEQHGSSSGSSSSYGQ 1925
Query: 474 YGAQASMGLS----GSYGAQSAAAATGSYGA----AAAYGAQPS----ATLAAPYRT--- 518
+G+ + L GS QS + + G +G+ +++YG S ++ PY +
Sbjct: 1926 HGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYGSGSGWSSSRGPYESGSG 1985
Query: 519 --------QSSASLAASYAAQQHPQAAASYRGQPGNAYDGAGQPSA 556
+S + ++ Y +S GQ G+A +GQ S+
Sbjct: 1986 HSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSA---SGQSSS 2028
>gi|208431836 poly A binding protein, cytoplasmic 4 isoform 3 [Homo
sapiens]
Length = 631
Score = 63.2 bits (152), Expect = 8e-10
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 23/169 (13%)
Query: 3 IFVGNVDGADTTPEELAALFAPYGTVMSCAVM------KQFAFVHMRENAGALRAIEALH 56
+F+ N+D + + L F+ +G ++SC V+ K +AFVH A +AIE ++
Sbjct: 101 VFIKNLDKSIDN-KALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMN 159
Query: 57 GHELRPGRALVVEMSRPRPLNT---------WKIFVGNVSAACTSQELRSLFERRGRVIE 107
G L + V + +++ N + L+ LF + G+ +
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 108 CDVVKD-------YAFVHMEKEADAKAAIAQLNGKEVKGKRINVELSTK 149
V++D + FV EK DA A+ ++NGKE+ GK I V + K
Sbjct: 220 VKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQK 268
Score = 37.7 bits (86), Expect = 0.035
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 23/124 (18%)
Query: 81 IFVGNVSAACTSQELRSLFERRGRVIECDVVKD--------YAFVHMEKEADAKAAIAQL 132
++VG++ + T L F G V+ V +D YA+V+ ++ ADA+ A+ +
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 133 NGKEVKGKRINVELSTKGQKKGPGLAVQSGDKTKKPGAGDTAFPGTG---GFSATFDYQQ 189
N +KGK I + S ++ P L +K G G+ A +D
Sbjct: 73 NFDVIKGKPIRIMWS----QRDPSL--------RKSGVGNVFIKNLDKSIDNKALYDTFS 120
Query: 190 AFGN 193
AFGN
Sbjct: 121 AFGN 124
>gi|4504715 poly A binding protein, cytoplasmic 4 isoform 2 [Homo
sapiens]
Length = 644
Score = 63.2 bits (152), Expect = 8e-10
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 23/169 (13%)
Query: 3 IFVGNVDGADTTPEELAALFAPYGTVMSCAVM------KQFAFVHMRENAGALRAIEALH 56
+F+ N+D + + L F+ +G ++SC V+ K +AFVH A +AIE ++
Sbjct: 101 VFIKNLDKSIDN-KALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMN 159
Query: 57 GHELRPGRALVVEMSRPRPLNT---------WKIFVGNVSAACTSQELRSLFERRGRVIE 107
G L + V + +++ N + L+ LF + G+ +
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 108 CDVVKD-------YAFVHMEKEADAKAAIAQLNGKEVKGKRINVELSTK 149
V++D + FV EK DA A+ ++NGKE+ GK I V + K
Sbjct: 220 VKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQK 268
Score = 37.7 bits (86), Expect = 0.035
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 23/124 (18%)
Query: 81 IFVGNVSAACTSQELRSLFERRGRVIECDVVKD--------YAFVHMEKEADAKAAIAQL 132
++VG++ + T L F G V+ V +D YA+V+ ++ ADA+ A+ +
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 133 NGKEVKGKRINVELSTKGQKKGPGLAVQSGDKTKKPGAGDTAFPGTG---GFSATFDYQQ 189
N +KGK I + S ++ P L +K G G+ A +D
Sbjct: 73 NFDVIKGKPIRIMWS----QRDPSL--------RKSGVGNVFIKNLDKSIDNKALYDTFS 120
Query: 190 AFGN 193
AFGN
Sbjct: 121 AFGN 124
>gi|208431833 poly A binding protein, cytoplasmic 4 isoform 1 [Homo
sapiens]
Length = 660
Score = 63.2 bits (152), Expect = 8e-10
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 23/169 (13%)
Query: 3 IFVGNVDGADTTPEELAALFAPYGTVMSCAVM------KQFAFVHMRENAGALRAIEALH 56
+F+ N+D + + L F+ +G ++SC V+ K +AFVH A +AIE ++
Sbjct: 101 VFIKNLDKSIDN-KALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMN 159
Query: 57 GHELRPGRALVVEMSRPRPLNT---------WKIFVGNVSAACTSQELRSLFERRGRVIE 107
G L + V + +++ N + L+ LF + G+ +
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 108 CDVVKD-------YAFVHMEKEADAKAAIAQLNGKEVKGKRINVELSTK 149
V++D + FV EK DA A+ ++NGKE+ GK I V + K
Sbjct: 220 VKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQK 268
Score = 37.7 bits (86), Expect = 0.035
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 23/124 (18%)
Query: 81 IFVGNVSAACTSQELRSLFERRGRVIECDVVKD--------YAFVHMEKEADAKAAIAQL 132
++VG++ + T L F G V+ V +D YA+V+ ++ ADA+ A+ +
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 133 NGKEVKGKRINVELSTKGQKKGPGLAVQSGDKTKKPGAGDTAFPGTG---GFSATFDYQQ 189
N +KGK I + S ++ P L +K G G+ A +D
Sbjct: 73 NFDVIKGKPIRIMWS----QRDPSL--------RKSGVGNVFIKNLDKSIDNKALYDTFS 120
Query: 190 AFGN 193
AFGN
Sbjct: 121 AFGN 124
>gi|4507499 TIA-1 related protein isoform 1 [Homo sapiens]
Length = 375
Score = 62.0 bits (149), Expect = 2e-09
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 3 IFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQ------FAFVHMRENAGALRAIEALH 56
++VGN+ D T + LF+ G SC ++ + + FV E+ A A+ A++
Sbjct: 11 LYVGNLS-RDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMN 69
Query: 57 GH-----ELRPGRALVVEMSRPRPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVV 111
G E++ A + N + +FVG++S T+++++S F G++ + VV
Sbjct: 70 GRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVV 129
Query: 112 KD--------YAFVHMEKEADAKAAIAQLNGKEVKGKRINVELSTK 149
KD Y FV + DA+ AI + G+ + G++I +T+
Sbjct: 130 KDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 175
Score = 47.4 bits (111), Expect = 4e-05
Identities = 69/283 (24%), Positives = 107/283 (37%), Gaps = 65/283 (22%)
Query: 3 IFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFA--------FVHMRENAGALRAI-- 52
+FVG++ TT E++ + FAP+G + V+K A FV A AI
Sbjct: 99 VFVGDLSPEITT-EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 157
Query: 53 ---EALHGHELRPGRAL---------------------VVEMSRPRPLNTWKIFVGNVSA 88
+ L G ++R A VV S P+ ++ G +++
Sbjct: 158 MGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCT---VYCGGIAS 214
Query: 89 ACTSQELRSLFERRGRVIECDVV--KDYAFVHMEKEADAKAAIAQLNGKEVKGKRINVEL 146
T Q +R F G+++E V K Y+FV A AI +NG ++G +
Sbjct: 215 GLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYW 274
Query: 147 STKGQKKGPGLAVQSGDKTKKPGAGDTAFPGTGGFSATFDYQQAFGN-STGGFD----GQ 201
+S D TK D + G +S + Q +G G+ G
Sbjct: 275 GK-----------ESPDMTKNFQQVD--YSQWGQWSQVYGNPQQYGQYMANGWQVPPYGV 321
Query: 202 ARQP-TPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSV 243
QP FG D+S P A+++ AQP +A P V
Sbjct: 322 YGQPWNQQGFGVDQS------PSAAWMGGFGAQPPQGQAPPPV 358
>gi|169173184 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1230
Score = 62.0 bits (149), Expect = 2e-09
Identities = 99/408 (24%), Positives = 170/408 (41%), Gaps = 49/408 (12%)
Query: 154 GPGLAVQSGDKTKKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGFDGQARQPTPPFFGRD 213
G G A S P A P G S D A +++G A P+ +
Sbjct: 17 GSGWASSSASGASTPSNSGWASPSASGASIPSDSGWASPSASG-----ASTPSNSGWASF 71
Query: 214 RSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQPSASLGVGYRTQPMTAQA--A 271
+ P + + +P + +T S A+ + PS S G+ + ++ + +
Sbjct: 72 SASWASIPSDSGWASPSASWASTPSDSGWASPSASGASIPSDS---GWASPSVSGASIPS 128
Query: 272 SYRAQPSVS-LGAPYRGQLASPSSQSAAASSLGPYGGAQPSAS----ALSSYGGQAAAAS 326
++ A PS S P ASPS+ A+ SS G A PSAS + S A+ AS
Sbjct: 129 AFWASPSASGASTPSDSGWASPSASWASTSS--DSGWASPSASWTSPSASCASSSASGAS 186
Query: 327 SLNSYGAQGSSL------ASYGNQPSSYGAQAASSYGVRAAAS----SYNTQGAASSLGS 376
+ + G S+ S+ + PS +G + S A++S S + GA++S S
Sbjct: 187 TPSDSGWASPSVFWVSPSTSWASSPSDFGWASTPSDSGWASSSASCISPSASGASTSSDS 246
Query: 377 YGAQ------AASYGAQSAASSLAYGAQAASYNAQ--------PSASYNAQSAPYAAQQA 422
A + S S +S + + +AS+++ PSAS+ + SA +A+ +
Sbjct: 247 GWASPSASWVSTSTSRASTSSDSGWASSSASWDSITSDSGWVCPSASWASSSASWASAPS 306
Query: 423 ASYSSQPAAYVAQPATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGL 482
S SS P+ A + + +AS A+ A+ + S+ A V T + + + ++ G
Sbjct: 307 DSGSSSPSVSRASTLSVSGWASFSASGASAPSDSGWTSHSASGVSTTSDSGWASPSASGA 366
Query: 483 SGSYGAQSAAAATGSYGAAAAYGAQPSATLAAPYRTQSSASLAASYAA 530
S S + + + +A A PSA+ A+ AS +AS A+
Sbjct: 367 STS--------SDSGWASPSASWASPSASGASTPSDSGWASPSASGAS 406
Score = 53.1 bits (126), Expect = 8e-07
Identities = 89/337 (26%), Positives = 138/337 (40%), Gaps = 44/337 (13%)
Query: 156 GLAVQSGDKTKKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGFDGQARQPTPPFFGRDR- 214
G A S P A P G S D A + +G A +P G
Sbjct: 83 GWASPSASWASTPSDSGWASPSASGASIPSDSGWASPSVSGASIPSAFWASPSASGASTP 142
Query: 215 SPLRRSPPRASYVAPLT----AQPATYRAQPSVSLGAAYRAQPSASLGVGYRT------Q 264
S + P AS+ + + A P+ PS S ++ + S G+ +
Sbjct: 143 SDSGWASPSASWASTSSDSGWASPSASWTSPSASCASSSASGASTPSDSGWASPSVFWVS 202
Query: 265 PMTAQAAS-----YRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSAS------ 313
P T+ A+S + + PS S A SPS+ A+ SS G A PSAS
Sbjct: 203 PSTSWASSPSDFGWASTPSDSGWASSSASCISPSASGASTSS--DSGWASPSASWVSTST 260
Query: 314 ---ALSSYGGQAAAASSLNSYGAQG----------SSLASYGNQPSSYGAQAASSYGVRA 360
+ SS G A++++S +S + SS AS+ + PS G+ + S +
Sbjct: 261 SRASTSSDSGWASSSASWDSITSDSGWVCPSASWASSSASWASAPSDSGSSSPSV----S 316
Query: 361 AASSYNTQGAASSLGSYGAQAASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYA-A 419
AS+ + G AS S GA A S ++ S+ + S A PSAS + S+ A
Sbjct: 317 RASTLSVSGWASFSAS-GASAPSDSGWTSHSASGVSTTSDSGWASPSASGASTSSDSGWA 375
Query: 420 QQAASYSSQPAAYVAQPATAAAYASQPAAYAAQATTP 456
+AS++S P+A A + + +AS A+ A+ + P
Sbjct: 376 SPSASWAS-PSASGASTPSDSGWASPSASGASMPSAP 411
Score = 43.5 bits (101), Expect = 6e-04
Identities = 64/277 (23%), Positives = 125/277 (45%), Gaps = 32/277 (11%)
Query: 312 ASALSSYGGQAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAA 371
AS +S+ G A+SS + GA S + + + PS+ GA S G + ++S + +
Sbjct: 9 ASGVSTPSGSGWASSSAS--GASTPSNSGWAS-PSASGASIPSDSGWASPSASGASTPSN 65
Query: 372 SSLGSYGAQAASYGAQSAASSLAYGAQAASYNAQPSAS-YNAQSAPYAAQQAASYSSQPA 430
S S+ A AS + S + + +AS+ + PS S + + SA A+ + S + P+
Sbjct: 66 SGWASFSASWASIPSDSG-----WASPSASWASTPSDSGWASPSASGASIPSDSGWASPS 120
Query: 431 AYVAQPATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQS 490
V+ + +A+ + P+ A+ A+TP + + +S AS S + + S
Sbjct: 121 --VSGASIPSAFWASPS--ASGASTPSDSGWASPSASWASTSSDSGWASPSASWTSPSAS 176
Query: 491 AAAATGS---------YGAAAAYGAQPSATLAAP------YRTQSSASLAASYAAQQHPQ 535
A+++ S + + + + PS + A+ T S + A+S A+ P
Sbjct: 177 CASSSASGASTPSDSGWASPSVFWVSPSTSWASSPSDFGWASTPSDSGWASSSASCISPS 236
Query: 536 AAASYRGQPGNAYDGAGQPSAAYLSMSQGAVANANST 572
A+ G ++ G PSA+++S S + ++ +
Sbjct: 237 AS----GASTSSDSGWASPSASWVSTSTSRASTSSDS 269
>gi|185135971 poly(A)-binding protein, cytoplasmic 1-like [Homo
sapiens]
Length = 614
Score = 61.6 bits (148), Expect = 2e-09
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 23/160 (14%)
Query: 3 IFVGNVDGADTTPEELAALFAPYGTVMSCAVM------KQFAFVHMRENAGALRAIEALH 56
IF+ N++ + + L F+ +G ++SC V + F FVH + A +AI ++
Sbjct: 101 IFIKNLEDSIDN-KALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMN 159
Query: 57 GHELRPGRALVVEMSR---------PRPLNTWKIFVGNVSAACTSQELRSLFERRGRVIE 107
G L + V R L I+V N+ Q L+ LF + G+++
Sbjct: 160 GMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLS 219
Query: 108 CDVVKD-------YAFVHMEKEADAKAAIAQLNGKEVKGK 140
V++D + FV+ EK +A+ A+ +NGKEV G+
Sbjct: 220 VKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGR 259
Score = 49.3 bits (116), Expect = 1e-05
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 3 IFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQ--------FAFVHMRENAGALRAIEA 54
++VG++ D T L F+P G ++S V + +A+++ ++ A A RA++
Sbjct: 13 LYVGDLH-PDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 55 LHGHELRPGRALVVEMSRPRP----LNTWKIFVGNVSAACTSQELRSLFERRGRVIECDV 110
++ E+ G+ + + S+ P IF+ N+ + ++ L F G ++ C V
Sbjct: 72 MN-FEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKV 130
Query: 111 VKD------YAFVHMEKEADAKAAIAQLNGKEVKGKRINV 144
D + FVH E A+ AI +NG + +++ V
Sbjct: 131 ACDEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFV 170
Score = 35.0 bits (79), Expect = 0.22
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 23/124 (18%)
Query: 81 IFVGNVSAACTSQELRSLFERRGRVIECDVVKD--------YAFVHMEKEADAKAAIAQL 132
++VG++ T L F G ++ V +D YA+++ ++ ADA+ A+ +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 133 NGKEVKGKRINVELSTKGQKKGPGLAVQSGDKTKKPGAGDTAFPGTGGF---SATFDYQQ 189
N + +KG+ I + S ++ PGL +K G G+ A +D
Sbjct: 73 NFEMLKGQPIRIMWS----QRDPGL--------RKSGVGNIFIKNLEDSIDNKALYDTFS 120
Query: 190 AFGN 193
FGN
Sbjct: 121 TFGN 124
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 61.6 bits (148), Expect = 2e-09
Identities = 96/365 (26%), Positives = 127/365 (34%), Gaps = 86/365 (23%)
Query: 265 PMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGG--QA 322
P + AA+ ++P S A AS SS S A G GG PSA+ GG Q
Sbjct: 239 PGSGAAAAAGSKPPPSSSAS-----ASSSSSSFAQQRFGAMGGGGPSAAG----GGTPQP 289
Query: 323 AAASSLN--------SYGAQGSSLASYGNQPSSYGA------QAASSYGVRAAASSYNTQ 368
A +LN + G QG Y P GA A+ +G AAA
Sbjct: 290 TATPTLNQLLTSPSSARGYQGYPGGDYSGGPQDGGAGKGPADMASQCWGAAAAA------ 343
Query: 369 GAASSLGSYGAQAASYGAQSAASSLAYGAQAASYNAQPSASYNAQ----------SAPYA 418
AA++ S GAQ S+ A + S G Q + QPS+ + + PY+
Sbjct: 344 -AAAAAASGGAQQRSHHAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYS 402
Query: 419 AQQA-ASYSSQPAAYVAQPATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQ 477
QQ S Q Y QP + P +A + M G Q Q+ YG Q
Sbjct: 403 QQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGRAQSAMGGLSYTQ-----QIPPYGQQ 457
Query: 478 ASMGLSGSYGAQSAAAATGSYGAAAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAA 537
G YG Q PY Q S + QQ P
Sbjct: 458 GPSG----YGQQG----------------------QTPYYNQQS-----PHPQQQQP--- 483
Query: 538 ASYRGQPGNAYDGAGQPSAAYLSMSQGAVANANSTPPPYERTRLSPPRASYDDPYKKAVA 597
Y QP + A QPS Y Q S+ PPY + PP PY +
Sbjct: 484 -PYSQQPPSQTPHA-QPS--YQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQS 539
Query: 598 MSKRY 602
++++
Sbjct: 540 TTQQH 544
Score = 59.3 bits (142), Expect = 1e-08
Identities = 145/644 (22%), Positives = 210/644 (32%), Gaps = 162/644 (25%)
Query: 147 STKGQKKGPGLAVQSGDKTKKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGFDGQARQPT 206
S +G G G A +G K P + +A + F+ QQ FG GG A T
Sbjct: 233 SPRGGTPGSGAAAAAGSKPP-PSSSASASSSSSSFA-----QQRFGAMGGGGPSAAGGGT 286
Query: 207 PPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQPSASLGVGYRTQPM 266
P P + L P++ R G Y P G G M
Sbjct: 287 P------------QPTATPTLNQLLTSPSSARGYQGYP-GGDYSGGPQDG-GAGKGPADM 332
Query: 267 TAQ----AASYRAQPSVSLGAPYRGQLA--SPSSQSAAASSLG----------------- 303
+Q AA+ A + S GA R A SP S L
Sbjct: 333 ASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRP 392
Query: 304 -PYGGAQPSASALSS--------------YGGQAAAASSLNSYGAQGSSLA--SYGNQPS 346
PYGG P + YG Q + G S++ SY Q
Sbjct: 393 QPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGRAQSAMGGLSYTQQIP 452
Query: 347 SYGAQAASSYGVRAAASSYNTQGA--ASSLGSYGAQAAS--------YGAQSAASSLAYG 396
YG Q S YG + YN Q Y Q S Y Q +
Sbjct: 453 PYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQ 512
Query: 397 AQAASYNAQPSASYNAQS-APYAAQQAASYS---SQPAAYVAQPATAAAYASQ------P 446
+ Y+ QPS + QS APY +QQ+ + SQP +QP + Y Q P
Sbjct: 513 SSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPP--YSQPQAQSPYQQQQPQQPAP 570
Query: 447 AAYAAQATTPMAGSYGAQPVVQTQL----------NSYGAQAS--------------MGL 482
+ + QA P S +Q +Q +S+G+QAS M L
Sbjct: 571 STLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQEDMNL 630
Query: 483 S--------------------GSYGAQSAAAATGSYGAAAAYGAQPSATLAAPY------ 516
S G+ GA S +T ++ + P+ + +P+
Sbjct: 631 SLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLP 690
Query: 517 --RTQSSASLAASYAAQQHPQAAASYRGQPGNAYDG---AGQP-SAAYLSMSQGAVANAN 570
R S + + + + Q S PGN +GQ S + SM+Q ++A
Sbjct: 691 GIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDR 750
Query: 571 STPPPYERTRLSPPRASYDDPYKKAVAMSKRYGSDRRL-AELSDYRRLSES--------- 620
+ +P Y P + A+S R S ++ + Y++ S
Sbjct: 751 GY------MQRNPQMPQYSSP-QPGSALSPRQPSGGQIHTGMGSYQQNSMGSYGPQGGQY 803
Query: 621 --QLSFRRSPTKSSLDYRRLPDAHSDYARYSGSYNDYLRAAQMH 662
Q + R P +Y LP+A+ A +G N QMH
Sbjct: 804 GPQGGYPRQP-----NYNALPNANYPSAGMAGGINPMGAGGQMH 842
Score = 58.2 bits (139), Expect = 2e-08
Identities = 84/328 (25%), Positives = 125/328 (38%), Gaps = 33/328 (10%)
Query: 270 AASYRAQPSVSLGAPYRGQLASPSSQSAAASSL--GPYGGAQ-PSASALSSYGG-----Q 321
AA+ P+ G PY SPS+ +AAA+++ +GG Q P +AL S GG
Sbjct: 139 AAAALPPPAYGFGQPYG---RSPSAVAAAAAAVFHQQHGGQQSPGLAALQSGGGGGLEPY 195
Query: 322 AAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQA 381
A + + +G SY S+Y A +Y + + GAA++ GS +
Sbjct: 196 AGPQQNSHDHGFPNHQYNSYYPNRSAY-PPPAPAYALSSPRGGTPGSGAAAAAGSKPPPS 254
Query: 382 ASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQPATAAA 441
+S A S++SS A A PSA+ P A + P++A
Sbjct: 255 SSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQ-------LLTSPSSARG 307
Query: 442 YASQPAA-YAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSG-----SYGAQSAAAAT 495
Y P Y+ AG A Q + A A+ SG S+ A + ++
Sbjct: 308 YQGYPGGDYSGGPQDGGAGKGPADMASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSS 367
Query: 496 GSYGAAAAYGAQPSATL--AAPYRTQSSASLAASYAAQQHPQAAASYRGQPGNAYDGAGQ 553
G G A QPS+ + R Q Q P G PG Y G+
Sbjct: 368 GGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPY-GSQT 426
Query: 554 PSAAYLSM---SQGAVANANSTP--PPY 576
P ++M +Q A+ + T PPY
Sbjct: 427 PQRYPMTMQGRAQSAMGGLSYTQQIPPY 454
Score = 53.9 bits (128), Expect = 5e-07
Identities = 105/413 (25%), Positives = 144/413 (34%), Gaps = 57/413 (13%)
Query: 201 QARQPTPPFFGRDRSPLRRSP---PRASYVAPLTAQPATYRAQPSVSLGAAYRAQPSASL 257
Q Q PP + P + P P AP +Q +T + P +QP A
Sbjct: 502 QQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQ---SQPPYSQPQAQ- 557
Query: 258 GVGYRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSS 317
P Q A ++S A Y + S Q+A + P P + S
Sbjct: 558 ------SPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFP----PPQELSQDS 607
Query: 318 YGGQAAAASSL-NSYGAQGSSLASYGNQPSSYGAQAAS----SYGVRAAAS-SYNTQGAA 371
+G QA++A S+ +S G Q S ++PSS + S G A S +T G +
Sbjct: 608 FGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGIS 667
Query: 372 SSLGSYGAQAAS--------------YGAQSAASSLAYGAQAASYNAQPSASYNAQSAPY 417
SS G A S + S S A AQ+ S P+A Q P
Sbjct: 668 SSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPR 727
Query: 418 AAQQAASYSSQPAAYVAQPATAAAYASQPAAYAAQATTPMAGS--YGAQP---VVQTQLN 472
+ P+ + A Y Q Q ++P GS QP + T +
Sbjct: 728 PPSGQSDSIMHPSMNQSSIAQDRGY-MQRNPQMPQYSSPQPGSALSPRQPSGGQIHTGMG 786
Query: 473 SYGAQASMGLSGSYGAQSAAAATGSYGAAAAYGAQPSATLAAPYRTQSSASLAASYAAQQ 532
SY Q SM GSYG Q G YG Y QP+ A P SA +A
Sbjct: 787 SY-QQNSM---GSYGPQG-----GQYGPQGGYPRQPNYN-ALPNANYPSAGMAGGINPM- 835
Query: 533 HPQAAASYRGQPGNAYDGAGQPS-AAYLSMSQGAVANANSTPPPYERTRLSPP 584
A GQPG G P ++ SM + PP + + PP
Sbjct: 836 --GAGGQMHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPP 886
Score = 47.0 bits (110), Expect = 6e-05
Identities = 76/301 (25%), Positives = 102/301 (33%), Gaps = 44/301 (14%)
Query: 289 LASPSSQSAAASSLGPYGGAQPSASALSSYGGQAAAASSLNSYGAQGSSLASY----GNQ 344
+ +P +AAA YG QP + S+ AAA G Q LA+ G
Sbjct: 132 VGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPGLAALQSGGGGG 191
Query: 345 PSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQAASYGAQSAASSLAYGAQAASYNA 404
Y +S+ YN+ S +Y A +Y S AA+ +
Sbjct: 192 LEPYAGPQQNSHDHGFPNHQYNSYYPNRS--AYPPPAPAYALSSPRGGTPGSGAAAAAGS 249
Query: 405 QP----SASYNAQSAPYAAQQAASYSSQPAAYVAQPATAAAYASQPAAYAAQATTPMAGS 460
+P SAS ++ S+ +A Q+ + P+ A QP A TP
Sbjct: 250 KPPPSSSASASSSSSSFAQQRFGAMGG------GGPSAAGGGTPQPTA------TPTLNQ 297
Query: 461 YGAQPVVQTQLNSY-GAQASMG-LSGSYGAQSAAAATGSYGAAAAYGAQPSATLAAPYRT 518
P Y G S G G G A A+ +GAAAA
Sbjct: 298 LLTSPSSARGYQGYPGGDYSGGPQDGGAGKGPADMASQCWGAAAA--------------- 342
Query: 519 QSSASLAASYAAQQHPQAAASYRGQPGNAYDGAGQPSAAYLSMSQGAVANANSTPPPYER 578
++A+ AAS AQQ A G G G GQP A S P PY
Sbjct: 343 -AAAAAAASGGAQQRSHHAPMSPGSSG----GGGQPLARTPQPSSPMDQMGKMRPQPYGG 397
Query: 579 T 579
T
Sbjct: 398 T 398
Score = 42.7 bits (99), Expect = 0.001
Identities = 48/156 (30%), Positives = 60/156 (38%), Gaps = 24/156 (15%)
Query: 459 GSYGAQPVVQTQLNSYGAQASMGLSGSYGA--QSAAAATG--SYGAAAAYGAQPSATLAA 514
G+ G +P + L G S GA SAAAA +YG YG PSA AA
Sbjct: 105 GNAGPRPALNNNLTEPPGGGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAA 164
Query: 515 PYRTQSSASLAASYAAQQHPQAAA----------SYRGQPGNAYDGAGQPSAAYLSMSQG 564
++A + QQ P AA Y G N++D G P+ Y S
Sbjct: 165 -----AAAVFHQQHGGQQSPGLAALQSGGGGGLEPYAGPQQNSHD-HGFPNHQYNSY--- 215
Query: 565 AVANANSTPPPYERTRLSPPRASYDDPYKKAVAMSK 600
N ++ PPP LS PR A A SK
Sbjct: 216 -YPNRSAYPPPAPAYALSSPRGGTPGSGAAAAAGSK 250
Score = 29.6 bits (65), Expect = 9.4
Identities = 71/352 (20%), Positives = 114/352 (32%), Gaps = 53/352 (15%)
Query: 149 KGQKKGPGLAVQSGDKTKKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGFDGQARQPTPP 208
+G+ P + + K +P + G+G Q + G G + PTP
Sbjct: 1109 RGEDPPPDIFAAADSKKSQPKIQPPSPAGSGSMQGPQTPQSTSSSMAEG--GDLKPPTPA 1166
Query: 209 FFGRDRSPLRRSPPRASYVAPLTA----QPATYRAQPSVSLGAAYRAQPSASLGVGYRTQ 264
+ P R++ V A +T++ + S++ Y QPS + T
Sbjct: 1167 STPHSQIPPLPGMSRSNSVGIQDAFNDGSDSTFQKRNSMTPNPGY--QPSMN------TS 1218
Query: 265 PMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGG-AQPSASALS------- 316
M + SY PY +P S +S GP GG P + A
Sbjct: 1219 DMMGRM-SYEPNKD-----PYGSMRKAPGSDPFMSSGQGPNGGMGDPYSRAAGPGLGNVA 1272
Query: 317 -------SYGGQAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQG 369
YGG + G +G ++++ QP+ + S + Q
Sbjct: 1273 MGPRQHYPYGGPYDRVRTEPGIGPEG-NMSTGAPQPNLMPSNPDSGMYSPSRYPPQQQQQ 1331
Query: 370 AASSLGSYGAQAASYGAQSAA-----SSLAYGAQAASYNAQPSASYNAQSAPYAAQQAAS 424
SYG Q ++ G S + + Y Q +Y +Y P +
Sbjct: 1332 QQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTY---GPPAKRHEGEM 1388
Query: 425 YSSQPAAYVAQPATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQL-NSYG 475
YS + QP +QP P + AQP Q + N YG
Sbjct: 1389 YSVPYSTGQGQPQQQQLPPAQP--------QPASQQQAAQPSPQQDVYNQYG 1432
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 61.6 bits (148), Expect = 2e-09
Identities = 96/365 (26%), Positives = 127/365 (34%), Gaps = 86/365 (23%)
Query: 265 PMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGG--QA 322
P + AA+ ++P S A AS SS S A G GG PSA+ GG Q
Sbjct: 239 PGSGAAAAAGSKPPPSSSAS-----ASSSSSSFAQQRFGAMGGGGPSAAG----GGTPQP 289
Query: 323 AAASSLN--------SYGAQGSSLASYGNQPSSYGA------QAASSYGVRAAASSYNTQ 368
A +LN + G QG Y P GA A+ +G AAA
Sbjct: 290 TATPTLNQLLTSPSSARGYQGYPGGDYSGGPQDGGAGKGPADMASQCWGAAAAA------ 343
Query: 369 GAASSLGSYGAQAASYGAQSAASSLAYGAQAASYNAQPSASYNAQ----------SAPYA 418
AA++ S GAQ S+ A + S G Q + QPS+ + + PY+
Sbjct: 344 -AAAAAASGGAQQRSHHAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYS 402
Query: 419 AQQA-ASYSSQPAAYVAQPATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQ 477
QQ S Q Y QP + P +A + M G Q Q+ YG Q
Sbjct: 403 QQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGRAQSAMGGLSYTQ-----QIPPYGQQ 457
Query: 478 ASMGLSGSYGAQSAAAATGSYGAAAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAA 537
G YG Q PY Q S + QQ P
Sbjct: 458 GPSG----YGQQG----------------------QTPYYNQQS-----PHPQQQQP--- 483
Query: 538 ASYRGQPGNAYDGAGQPSAAYLSMSQGAVANANSTPPPYERTRLSPPRASYDDPYKKAVA 597
Y QP + A QPS Y Q S+ PPY + PP PY +
Sbjct: 484 -PYSQQPPSQTPHA-QPS--YQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQS 539
Query: 598 MSKRY 602
++++
Sbjct: 540 TTQQH 544
Score = 59.3 bits (142), Expect = 1e-08
Identities = 145/644 (22%), Positives = 210/644 (32%), Gaps = 162/644 (25%)
Query: 147 STKGQKKGPGLAVQSGDKTKKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGFDGQARQPT 206
S +G G G A +G K P + +A + F+ QQ FG GG A T
Sbjct: 233 SPRGGTPGSGAAAAAGSKPP-PSSSASASSSSSSFA-----QQRFGAMGGGGPSAAGGGT 286
Query: 207 PPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQPSASLGVGYRTQPM 266
P P + L P++ R G Y P G G M
Sbjct: 287 P------------QPTATPTLNQLLTSPSSARGYQGYP-GGDYSGGPQDG-GAGKGPADM 332
Query: 267 TAQ----AASYRAQPSVSLGAPYRGQLA--SPSSQSAAASSLG----------------- 303
+Q AA+ A + S GA R A SP S L
Sbjct: 333 ASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRP 392
Query: 304 -PYGGAQPSASALSS--------------YGGQAAAASSLNSYGAQGSSLA--SYGNQPS 346
PYGG P + YG Q + G S++ SY Q
Sbjct: 393 QPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGRAQSAMGGLSYTQQIP 452
Query: 347 SYGAQAASSYGVRAAASSYNTQGA--ASSLGSYGAQAAS--------YGAQSAASSLAYG 396
YG Q S YG + YN Q Y Q S Y Q +
Sbjct: 453 PYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQ 512
Query: 397 AQAASYNAQPSASYNAQS-APYAAQQAASYS---SQPAAYVAQPATAAAYASQ------P 446
+ Y+ QPS + QS APY +QQ+ + SQP +QP + Y Q P
Sbjct: 513 SSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPP--YSQPQAQSPYQQQQPQQPAP 570
Query: 447 AAYAAQATTPMAGSYGAQPVVQTQL----------NSYGAQAS--------------MGL 482
+ + QA P S +Q +Q +S+G+QAS M L
Sbjct: 571 STLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQEDMNL 630
Query: 483 S--------------------GSYGAQSAAAATGSYGAAAAYGAQPSATLAAPY------ 516
S G+ GA S +T ++ + P+ + +P+
Sbjct: 631 SLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLP 690
Query: 517 --RTQSSASLAASYAAQQHPQAAASYRGQPGNAYDG---AGQP-SAAYLSMSQGAVANAN 570
R S + + + + Q S PGN +GQ S + SM+Q ++A
Sbjct: 691 GIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDR 750
Query: 571 STPPPYERTRLSPPRASYDDPYKKAVAMSKRYGSDRRL-AELSDYRRLSES--------- 620
+ +P Y P + A+S R S ++ + Y++ S
Sbjct: 751 GY------MQRNPQMPQYSSP-QPGSALSPRQPSGGQIHTGMGSYQQNSMGSYGPQGGQY 803
Query: 621 --QLSFRRSPTKSSLDYRRLPDAHSDYARYSGSYNDYLRAAQMH 662
Q + R P +Y LP+A+ A +G N QMH
Sbjct: 804 GPQGGYPRQP-----NYNALPNANYPSAGMAGGINPMGAGGQMH 842
Score = 58.2 bits (139), Expect = 2e-08
Identities = 84/328 (25%), Positives = 125/328 (38%), Gaps = 33/328 (10%)
Query: 270 AASYRAQPSVSLGAPYRGQLASPSSQSAAASSL--GPYGGAQ-PSASALSSYGG-----Q 321
AA+ P+ G PY SPS+ +AAA+++ +GG Q P +AL S GG
Sbjct: 139 AAAALPPPAYGFGQPYG---RSPSAVAAAAAAVFHQQHGGQQSPGLAALQSGGGGGLEPY 195
Query: 322 AAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQA 381
A + + +G SY S+Y A +Y + + GAA++ GS +
Sbjct: 196 AGPQQNSHDHGFPNHQYNSYYPNRSAY-PPPAPAYALSSPRGGTPGSGAAAAAGSKPPPS 254
Query: 382 ASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQPATAAA 441
+S A S++SS A A PSA+ P A + P++A
Sbjct: 255 SSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQ-------LLTSPSSARG 307
Query: 442 YASQPAA-YAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSG-----SYGAQSAAAAT 495
Y P Y+ AG A Q + A A+ SG S+ A + ++
Sbjct: 308 YQGYPGGDYSGGPQDGGAGKGPADMASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSS 367
Query: 496 GSYGAAAAYGAQPSATL--AAPYRTQSSASLAASYAAQQHPQAAASYRGQPGNAYDGAGQ 553
G G A QPS+ + R Q Q P G PG Y G+
Sbjct: 368 GGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPY-GSQT 426
Query: 554 PSAAYLSM---SQGAVANANSTP--PPY 576
P ++M +Q A+ + T PPY
Sbjct: 427 PQRYPMTMQGRAQSAMGGLSYTQQIPPY 454
Score = 53.9 bits (128), Expect = 5e-07
Identities = 105/413 (25%), Positives = 144/413 (34%), Gaps = 57/413 (13%)
Query: 201 QARQPTPPFFGRDRSPLRRSP---PRASYVAPLTAQPATYRAQPSVSLGAAYRAQPSASL 257
Q Q PP + P + P P AP +Q +T + P +QP A
Sbjct: 502 QQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQ---SQPPYSQPQAQ- 557
Query: 258 GVGYRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSS 317
P Q A ++S A Y + S Q+A + P P + S
Sbjct: 558 ------SPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFP----PPQELSQDS 607
Query: 318 YGGQAAAASSL-NSYGAQGSSLASYGNQPSSYGAQAAS----SYGVRAAAS-SYNTQGAA 371
+G QA++A S+ +S G Q S ++PSS + S G A S +T G +
Sbjct: 608 FGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGIS 667
Query: 372 SSLGSYGAQAAS--------------YGAQSAASSLAYGAQAASYNAQPSASYNAQSAPY 417
SS G A S + S S A AQ+ S P+A Q P
Sbjct: 668 SSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPR 727
Query: 418 AAQQAASYSSQPAAYVAQPATAAAYASQPAAYAAQATTPMAGS--YGAQP---VVQTQLN 472
+ P+ + A Y Q Q ++P GS QP + T +
Sbjct: 728 PPSGQSDSIMHPSMNQSSIAQDRGY-MQRNPQMPQYSSPQPGSALSPRQPSGGQIHTGMG 786
Query: 473 SYGAQASMGLSGSYGAQSAAAATGSYGAAAAYGAQPSATLAAPYRTQSSASLAASYAAQQ 532
SY Q SM GSYG Q G YG Y QP+ A P SA +A
Sbjct: 787 SY-QQNSM---GSYGPQG-----GQYGPQGGYPRQPNYN-ALPNANYPSAGMAGGINPM- 835
Query: 533 HPQAAASYRGQPGNAYDGAGQPS-AAYLSMSQGAVANANSTPPPYERTRLSPP 584
A GQPG G P ++ SM + PP + + PP
Sbjct: 836 --GAGGQMHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPP 886
Score = 47.0 bits (110), Expect = 6e-05
Identities = 76/301 (25%), Positives = 102/301 (33%), Gaps = 44/301 (14%)
Query: 289 LASPSSQSAAASSLGPYGGAQPSASALSSYGGQAAAASSLNSYGAQGSSLASY----GNQ 344
+ +P +AAA YG QP + S+ AAA G Q LA+ G
Sbjct: 132 VGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPGLAALQSGGGGG 191
Query: 345 PSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQAASYGAQSAASSLAYGAQAASYNA 404
Y +S+ YN+ S +Y A +Y S AA+ +
Sbjct: 192 LEPYAGPQQNSHDHGFPNHQYNSYYPNRS--AYPPPAPAYALSSPRGGTPGSGAAAAAGS 249
Query: 405 QP----SASYNAQSAPYAAQQAASYSSQPAAYVAQPATAAAYASQPAAYAAQATTPMAGS 460
+P SAS ++ S+ +A Q+ + P+ A QP A TP
Sbjct: 250 KPPPSSSASASSSSSSFAQQRFGAMGG------GGPSAAGGGTPQPTA------TPTLNQ 297
Query: 461 YGAQPVVQTQLNSY-GAQASMG-LSGSYGAQSAAAATGSYGAAAAYGAQPSATLAAPYRT 518
P Y G S G G G A A+ +GAAAA
Sbjct: 298 LLTSPSSARGYQGYPGGDYSGGPQDGGAGKGPADMASQCWGAAAA--------------- 342
Query: 519 QSSASLAASYAAQQHPQAAASYRGQPGNAYDGAGQPSAAYLSMSQGAVANANSTPPPYER 578
++A+ AAS AQQ A G G G GQP A S P PY
Sbjct: 343 -AAAAAAASGGAQQRSHHAPMSPGSSG----GGGQPLARTPQPSSPMDQMGKMRPQPYGG 397
Query: 579 T 579
T
Sbjct: 398 T 398
Score = 42.7 bits (99), Expect = 0.001
Identities = 48/156 (30%), Positives = 60/156 (38%), Gaps = 24/156 (15%)
Query: 459 GSYGAQPVVQTQLNSYGAQASMGLSGSYGA--QSAAAATG--SYGAAAAYGAQPSATLAA 514
G+ G +P + L G S GA SAAAA +YG YG PSA AA
Sbjct: 105 GNAGPRPALNNNLTEPPGGGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAA 164
Query: 515 PYRTQSSASLAASYAAQQHPQAAA----------SYRGQPGNAYDGAGQPSAAYLSMSQG 564
++A + QQ P AA Y G N++D G P+ Y S
Sbjct: 165 -----AAAVFHQQHGGQQSPGLAALQSGGGGGLEPYAGPQQNSHD-HGFPNHQYNSY--- 215
Query: 565 AVANANSTPPPYERTRLSPPRASYDDPYKKAVAMSK 600
N ++ PPP LS PR A A SK
Sbjct: 216 -YPNRSAYPPPAPAYALSSPRGGTPGSGAAAAAGSK 250
>gi|188219593 TIA1 protein isoform 1 [Homo sapiens]
Length = 375
Score = 61.2 bits (147), Expect = 3e-09
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 3 IFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQ------FAFVHMRENAGALRAIEALH 56
++VGN+ D T + LF+ G +C ++ + FV E+ A A+ A++
Sbjct: 9 LYVGNLS-RDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMN 67
Query: 57 GH-----ELRPGRALVVEMSRPRPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVV 111
G E++ A + N + +FVG++S T++++++ F GR+ + VV
Sbjct: 68 GRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVV 127
Query: 112 KD--------YAFVHMEKEADAKAAIAQLNGKEVKGKRINVELSTK 149
KD Y FV + DA+ AI Q+ G+ + G++I +T+
Sbjct: 128 KDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 173
Score = 50.4 bits (119), Expect = 5e-06
Identities = 45/170 (26%), Positives = 70/170 (41%), Gaps = 34/170 (20%)
Query: 3 IFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFA--------FVHMRENAGALRAIEA 54
+FVG++ TT E++ A FAP+G + V+K A FV A AI+
Sbjct: 97 VFVGDLSPEITT-EDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 155
Query: 55 LHGHEL--RPGRALVVEMSRPRPLNTWK---------------------IFVGNVSAACT 91
+ G L R R P P +T++ ++ G V++ T
Sbjct: 156 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLT 215
Query: 92 SQELRSLFERRGRVIECDVVKD--YAFVHMEKEADAKAAIAQLNGKEVKG 139
Q +R F G+++E V D Y+FV A AI +NG ++G
Sbjct: 216 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEG 265
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.122 0.344
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,007,239
Number of Sequences: 37866
Number of extensions: 1265776
Number of successful extensions: 9698
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 244
Number of HSP's successfully gapped in prelim test: 630
Number of HSP's that attempted gapping in prelim test: 5970
Number of HSP's gapped (non-prelim): 2558
length of query: 669
length of database: 18,247,518
effective HSP length: 109
effective length of query: 560
effective length of database: 14,120,124
effective search space: 7907269440
effective search space used: 7907269440
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.