Guide to the Human Genome
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Name: RALYL Sequence: fasta or formatted (291aa) NCBI GI: 154240712
Description:

RALY RNA binding protein-like isoform 2

Referenced in:

hnRNP

Other entries for this name:
alt prot [304aa] RALY RNA binding protein-like isoform 1
alt mRNA [291aa] RALY RNA binding protein-like isoform 2
alt mRNA [291aa] RALY RNA binding protein-like isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         20           2
 C cysteine            0.7          2           1
 D aspartate           5.8         17           2
 E glutamate           8.9         26           2
 F phenylalanine       3.4         10           1
 G glycine             8.6         25           2
 H histidine           1.7          5           1
 I isoleucine          5.8         17           1
 K lysine              9.3         27           2
 L leucine             6.5         19           2
 M methionine          1.7          5           1
 N asparagine          3.4         10           1
 P proline             5.5         16           4
 Q glutamine           3.8         11           2
 R arginine            5.8         17           2
 S serine              6.9         20           1
 T threonine           5.2         15           3
 V valine              6.2         18           1
 W tryptophan          0.0          0           0
 Y tyrosine            3.8         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RALY RNA binding protein-like isoform 2 
RALYL                 1.000   RALY RNA binding protein-like isoform 2 
RALYL                 1.000   RALY RNA binding protein-like isoform 2 
RALYL                 1.000   RALY RNA binding protein-like isoform 1 
RALY                  0.463   RNA binding protein (autoantigenic, hnRNP-associated ...
HNRNPC                0.442   heterogeneous nuclear ribonucleoprotein C isoform a...
HNRNPC                0.442   heterogeneous nuclear ribonucleoprotein C isoform a...
HNRNPC                0.436   heterogeneous nuclear ribonucleoprotein C isoform b...
HNRNPC                0.436   heterogeneous nuclear ribonucleoprotein C isoform b...
HNRNPCL1              0.395   heterogeneous nuclear ribonucleoprotein C-like 1 [Ho...
RALY                  0.393   RNA binding protein (autoantigenic, hnRNP-associated...
LOC440563             0.388   heterogeneous nuclear ribonucleoprotein C-like [Hom...
LOC649330             0.381   PREDICTED: heterogeneous nuclear ribonucleoprotein ...
LOC652665             0.381   PREDICTED: similar to heterogeneous nuclear ribonuc...
LOC649330             0.381   heterogeneous nuclear ribonucleoprotein C-like [Hom...
RBM14                 0.072   RNA binding motif protein 14 
HNRNPR                0.043   heterogeneous nuclear ribonucleoprotein R isoform 3...
HNRNPR                0.043   heterogeneous nuclear ribonucleoprotein R isoform 1...
HNRNPR                0.043   heterogeneous nuclear ribonucleoprotein R isoform 4...
HNRNPR                0.043   heterogeneous nuclear ribonucleoprotein R isoform 2 [...
RBMXL1                0.036   RNA binding motif protein, X-linked-like 1 
RBMXL1                0.036   RNA binding motif protein, X-linked-like 1 
RBMX                  0.036   RNA binding motif protein, X-linked 
LOC100288788          0.036   PREDICTED: similar to RNA binding motif protein, X-...
LOC100288788          0.036   PREDICTED: hypothetical protein XP_002343863 
SFRS6                 0.036   arginine/serine-rich splicing factor 6 
TIA1                  0.034   TIA1 protein isoform 1 
FUSIP1                0.034   FUS interacting protein (serine-arginine rich) 1 iso...
RBMXL2                0.034   testes-specific heterogenous nuclear ribonucleoprot...
TIA1                  0.032   TIA1 protein isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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