Search of human proteins with 53829381

Search of human proteins with 53829381

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|53829381 plasminogen activator, urokinase receptor isoform 3
precursor [Homo sapiens]
         (290 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|53829381 plasminogen activator, urokinase receptor isoform 3 ...   621   e-178
gi|4505865 plasminogen activator, urokinase receptor isoform 1 p...   599   e-172
gi|53829379 plasminogen activator, urokinase receptor isoform 2 ...   421   e-118
gi|239757302 PREDICTED: similar to R28379_1 [Homo sapiens]             40   0.002
gi|239751807 PREDICTED: similar to R28379_1 [Homo sapiens]             40   0.002
gi|239746298 PREDICTED: similar to R28379_1 [Homo sapiens]             40   0.002
gi|93004088 GPI-anchored metastasis-associated protein homolog [...    40   0.002
gi|116812612 LY6/PLAUR domain containing 1 isoform a [Homo sapiens]    38   0.012
gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens]    35   0.059
gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens]    35   0.059
gi|164698546 LY6/PLAUR domain containing 5 isoform A [Homo sapiens]    35   0.059
gi|164663808 LY6/PLAUR domain containing 5 isoform B [Homo sapiens]    35   0.059
gi|224494019 tumor necrosis factor receptor superfamily, member ...    33   0.22 
gi|42544151 AMME chromosomal region gene 1-like [Homo sapiens]         33   0.29 
gi|61743980 stabilin 2 precursor [Homo sapiens]                        32   0.85 
gi|27437045 colony stimulating factor 3 receptor isoform d precu...    31   1.5  
gi|24496783 colony stimulating factor 3 receptor isoform c precu...    31   1.5  
gi|27437042 colony stimulating factor 3 receptor isoform b precu...    31   1.5  
gi|4503081 colony stimulating factor 3 receptor isoform a precur...    31   1.5  
gi|224494026 tumor necrosis factor receptor superfamily, member ...    30   1.9  
gi|62122917 filaggrin family member 2 [Homo sapiens]                   30   1.9  
gi|29294643 secreted Ly6/uPAR related protein 2 isoform b [Homo ...    30   2.5  
gi|116812604 LY6/PLAUR domain containing 1 isoform b [Homo sapiens]    30   2.5  
gi|161333835 activin A receptor, type IC isoform 2 [Homo sapiens]      29   4.2  
gi|161333833 activin A receptor, type IC isoform 1 [Homo sapiens]      29   4.2  
gi|169162953 PREDICTED: RANBP2-like and GRIP domain containing 8...    29   4.2  
gi|29337281 Ly-6 neurotoxin-like protein 1 isoform a [Homo sapiens]    29   4.2  
gi|75709184 contactin 3 [Homo sapiens]                                 29   5.5  
gi|110349719 titin isoform N2-A [Homo sapiens]                         28   7.2  
gi|194328809 latent transforming growth factor beta binding prot...    28   7.2  

>gi|53829381 plasminogen activator, urokinase receptor isoform 3
           precursor [Homo sapiens]
          Length = 290

 Score =  621 bits (1602), Expect = e-178
 Identities = 290/290 (100%), Positives = 290/290 (100%)

Query: 1   MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEEL 60
           MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEEL
Sbjct: 1   MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEEL 60

Query: 61  ELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISC 120
           ELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISC
Sbjct: 61  ELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISC 120

Query: 121 GSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEVLELENLPQNGRQCYSCKGNSTH 180
           GSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEVLELENLPQNGRQCYSCKGNSTH
Sbjct: 121 GSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEVLELENLPQNGRQCYSCKGNSTH 180

Query: 181 GCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDV 240
           GCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDV
Sbjct: 181 GCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDV 240

Query: 241 SCCTKSGCNHPDLDVQYRSGAAPQPGPAHLSLTITLLMTARLWGGTLLWT 290
           SCCTKSGCNHPDLDVQYRSGAAPQPGPAHLSLTITLLMTARLWGGTLLWT
Sbjct: 241 SCCTKSGCNHPDLDVQYRSGAAPQPGPAHLSLTITLLMTARLWGGTLLWT 290


>gi|4505865 plasminogen activator, urokinase receptor isoform 1
           precursor [Homo sapiens]
          Length = 335

 Score =  599 bits (1545), Expect = e-172
 Identities = 289/335 (86%), Positives = 290/335 (86%), Gaps = 45/335 (13%)

Query: 1   MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEEL 60
           MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEEL
Sbjct: 1   MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEEL 60

Query: 61  ELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISC 120
           ELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISC
Sbjct: 61  ELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISC 120

Query: 121 GSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEE----------------------- 157
           GSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEE                       
Sbjct: 121 GSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNG 180

Query: 158 ----------------------VLELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGP 195
                                 +LELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGP
Sbjct: 181 FHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGP 240

Query: 196 MNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPDLDV 255
           MNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPDLDV
Sbjct: 241 MNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPDLDV 300

Query: 256 QYRSGAAPQPGPAHLSLTITLLMTARLWGGTLLWT 290
           QYRSGAAPQPGPAHLSLTITLLMTARLWGGTLLWT
Sbjct: 301 QYRSGAAPQPGPAHLSLTITLLMTARLWGGTLLWT 335


>gi|53829379 plasminogen activator, urokinase receptor isoform 2
           precursor [Homo sapiens]
          Length = 281

 Score =  421 bits (1083), Expect = e-118
 Identities = 206/252 (81%), Positives = 207/252 (82%), Gaps = 45/252 (17%)

Query: 1   MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEEL 60
           MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEEL
Sbjct: 1   MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEEL 60

Query: 61  ELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISC 120
           ELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISC
Sbjct: 61  ELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISC 120

Query: 121 GSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEE----------------------- 157
           GSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEE                       
Sbjct: 121 GSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNG 180

Query: 158 ----------------------VLELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGP 195
                                 +LELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGP
Sbjct: 181 FHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGP 240

Query: 196 MNQCLVATGTHE 207
           MNQCLVATGTHE
Sbjct: 241 MNQCLVATGTHE 252


>gi|239757302 PREDICTED: similar to R28379_1 [Homo sapiens]
          Length = 204

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 11/69 (15%)

Query: 161 LENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGPMNQCL-----VATGTHEPKNQSYMV 215
           L NL +NG  C +C  +    C    T    C G  N C+     V  G  +P+   + +
Sbjct: 116 LTNLTENGLMCPACTASFRDKCMGPMTH---CTGKENHCVSLSGHVQAGIFKPR---FAM 169

Query: 216 RGCATASMC 224
           RGCAT SMC
Sbjct: 170 RGCATESMC 178



 Score = 28.5 bits (62), Expect = 7.2
 Identities = 20/76 (26%), Positives = 27/76 (35%), Gaps = 12/76 (15%)

Query: 192 CRGPMNQC---------LVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFS-MNHIDVS 241
           C G M  C         LV   T + K   +  +GC  +  C    +       +H+  S
Sbjct: 39  CHGQMKTCSSDKDTCVLLVGKATSKGKELVHTYKGCIRSQDCYSGVISTTMGPKDHMVTS 98

Query: 242 --CCTKSGCNHPDLDV 255
             CC   GCN   L V
Sbjct: 99  SFCCQSDGCNSAFLSV 114


>gi|239751807 PREDICTED: similar to R28379_1 [Homo sapiens]
          Length = 204

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 11/69 (15%)

Query: 161 LENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGPMNQCL-----VATGTHEPKNQSYMV 215
           L NL +NG  C +C  +    C    T    C G  N C+     V  G  +P+   + +
Sbjct: 116 LTNLTENGLMCPACTASFRDKCMGPMTH---CTGKENHCVSLSGHVQAGIFKPR---FAM 169

Query: 216 RGCATASMC 224
           RGCAT SMC
Sbjct: 170 RGCATESMC 178



 Score = 28.5 bits (62), Expect = 7.2
 Identities = 20/76 (26%), Positives = 27/76 (35%), Gaps = 12/76 (15%)

Query: 192 CRGPMNQC---------LVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFS-MNHIDVS 241
           C G M  C         LV   T + K   +  +GC  +  C    +       +H+  S
Sbjct: 39  CHGQMKTCSSDKDTCVLLVGKATSKGKELVHTYKGCIRSQDCYSGVISTTMGPKDHMVTS 98

Query: 242 --CCTKSGCNHPDLDV 255
             CC   GCN   L V
Sbjct: 99  SFCCQSDGCNSAFLSV 114


>gi|239746298 PREDICTED: similar to R28379_1 [Homo sapiens]
          Length = 204

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 11/69 (15%)

Query: 161 LENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGPMNQCL-----VATGTHEPKNQSYMV 215
           L NL +NG  C +C  +    C    T    C G  N C+     V  G  +P+   + +
Sbjct: 116 LTNLTENGLMCPACTASFRDKCMGPMTH---CTGKENHCVSLSGHVQAGIFKPR---FAM 169

Query: 216 RGCATASMC 224
           RGCAT SMC
Sbjct: 170 RGCATESMC 178



 Score = 28.5 bits (62), Expect = 7.2
 Identities = 20/76 (26%), Positives = 27/76 (35%), Gaps = 12/76 (15%)

Query: 192 CRGPMNQC---------LVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFS-MNHIDVS 241
           C G M  C         LV   T + K   +  +GC  +  C    +       +H+  S
Sbjct: 39  CHGQMKTCSSDKDTCVLLVGKATSKGKELVHTYKGCIRSQDCYSGVISTTMGPKDHMVTS 98

Query: 242 --CCTKSGCNHPDLDV 255
             CC   GCN   L V
Sbjct: 99  SFCCQSDGCNSAFLSV 114


>gi|93004088 GPI-anchored metastasis-associated protein homolog
           [Homo sapiens]
          Length = 346

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 31/106 (29%), Positives = 40/106 (37%), Gaps = 10/106 (9%)

Query: 165 PQNGRQCYSCKGNSTHGCSSEETFLIDCRGPMNQ----CLVATGTHEPKN--QSYMVRGC 218
           P NG +CYSC G S   C      ++ C    +     C     T    N   S  VRGC
Sbjct: 134 PPNGVECYSCVGLSREACQGTSPPVVSCYNASDHVYKGCFDGNVTLTAANVTVSLPVRGC 193

Query: 219 ATASMC-QHAHLGDAFSMNHIDVSCCTKSGCNHPDLDVQYRSGAAP 263
                C +    G  F+++    SCC  S CN    +  Y S   P
Sbjct: 194 VQDEFCTRDGVTGPGFTLSG---SCCQGSRCNSDLRNKTYFSPRIP 236



 Score = 33.1 bits (74), Expect = 0.29
 Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 3/83 (3%)

Query: 170 QCYSCKGNSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQ--SYMVRGCATASMCQHA 227
           +CYSC   +  GCS  +   + C   ++ C  A G  E  +   S  VRGC +    ++ 
Sbjct: 32  ECYSCVQKADDGCSPNKMKTVKCAPGVDVCTEAVGAVETIHGQFSLAVRGCGSGLPGKND 91

Query: 228 HLGDAFS-MNHIDVSCCTKSGCN 249
              D    +  I +  C +  CN
Sbjct: 92  RGLDLHGLLAFIQLQQCAQDRCN 114


>gi|116812612 LY6/PLAUR domain containing 1 isoform a [Homo sapiens]
          Length = 141

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 9/116 (7%)

Query: 170 QCYSCKGNSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMVRGCATASMCQHAHL 229
           QCY C+    +   S   F+++C   +          +     Y  + CA+++ C  A  
Sbjct: 24  QCYQCEEFQLNNDCSSPEFIVNCTVNVQDMCQKEVMEQSAGIMYR-KSCASSAACLIASA 82

Query: 230 G-----DAFSMNHIDVSCCTKSGCNHPDLDVQYRSGAAPQPGPAHLSLTITLLMTA 280
           G         +N + +SCC    CN P    +  S +A +PG   L  TI  L  A
Sbjct: 83  GYQSFCSPGKLNSVCISCCNTPLCNGPRPKKRGSSASALRPG---LRTTILFLKLA 135


>gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens]
          Length = 488

 Score = 35.4 bits (80), Expect = 0.059
 Identities = 37/155 (23%), Positives = 62/155 (40%), Gaps = 28/155 (18%)

Query: 38  ECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGL-- 95
           EC  G + C+  I R WE+ E     +  C    KT+R  S R   ++ S+ E+   L  
Sbjct: 43  EC--GHNFCKACITRWWEDLER----DFPCPVCRKTSRYRSLRPNRQLGSMVEIAKQLQA 96

Query: 96  --------DLCNQGNSGRAVTYSRSRYLECISCGSS-----------DMSCERGRHQSLQ 136
                    LC Q +   ++     +   C+ C  S           D + +  + +  +
Sbjct: 97  VKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVVPLDDATQEYKEKLQK 156

Query: 137 CRSPEEQCLDVVTHW-IQEGEEVLELENLPQNGRQ 170
           C  P EQ L  +T     E ++  EL+ L ++ RQ
Sbjct: 157 CLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQ 191


>gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens]
          Length = 518

 Score = 35.4 bits (80), Expect = 0.059
 Identities = 37/155 (23%), Positives = 62/155 (40%), Gaps = 28/155 (18%)

Query: 38  ECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGL-- 95
           EC  G + C+  I R WE+ E     +  C    KT+R  S R   ++ S+ E+   L  
Sbjct: 43  EC--GHNFCKACITRWWEDLER----DFPCPVCRKTSRYRSLRPNRQLGSMVEIAKQLQA 96

Query: 96  --------DLCNQGNSGRAVTYSRSRYLECISCGSS-----------DMSCERGRHQSLQ 136
                    LC Q +   ++     +   C+ C  S           D + +  + +  +
Sbjct: 97  VKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVVPLDDATQEYKEKLQK 156

Query: 137 CRSPEEQCLDVVTHW-IQEGEEVLELENLPQNGRQ 170
           C  P EQ L  +T     E ++  EL+ L ++ RQ
Sbjct: 157 CLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQ 191


>gi|164698546 LY6/PLAUR domain containing 5 isoform A [Homo sapiens]
          Length = 251

 Score = 35.4 bits (80), Expect = 0.059
 Identities = 29/120 (24%), Positives = 43/120 (35%), Gaps = 4/120 (3%)

Query: 167 NGRQCYSCKGNSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQS--YMVRGCATASMC 224
           +G +CY+C G     C+   +  + C      C    G     N S    +R C   S C
Sbjct: 131 SGAECYACIGVHQDDCAIGRSRRVQCHQDQTACFQGNGRMTVGNFSVPVYIRTCHRPS-C 189

Query: 225 QHAHLGDAFSMNHIDVSCCTKSGCNHPDLDVQYRSGAAPQPGPAHLSLTITLLMTARLWG 284
                   ++   +  SCC    CN   +   + S +A  P P  L +   LL    L G
Sbjct: 190 TTEGTTSPWTAIDLQGSCCEGYLCNRKSMTQPFTSASATTP-PRALQVLALLLPVLLLVG 248


>gi|164663808 LY6/PLAUR domain containing 5 isoform B [Homo sapiens]
          Length = 208

 Score = 35.4 bits (80), Expect = 0.059
 Identities = 29/120 (24%), Positives = 43/120 (35%), Gaps = 4/120 (3%)

Query: 167 NGRQCYSCKGNSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQS--YMVRGCATASMC 224
           +G +CY+C G     C+   +  + C      C    G     N S    +R C   S C
Sbjct: 88  SGAECYACIGVHQDDCAIGRSRRVQCHQDQTACFQGNGRMTVGNFSVPVYIRTCHRPS-C 146

Query: 225 QHAHLGDAFSMNHIDVSCCTKSGCNHPDLDVQYRSGAAPQPGPAHLSLTITLLMTARLWG 284
                   ++   +  SCC    CN   +   + S +A  P P  L +   LL    L G
Sbjct: 147 TTEGTTSPWTAIDLQGSCCEGYLCNRKSMTQPFTSASATTP-PRALQVLALLLPVLLLVG 205


>gi|224494019 tumor necrosis factor receptor superfamily, member 10b
           isoform 1 precursor [Homo sapiens]
          Length = 440

 Score = 33.5 bits (75), Expect = 0.22
 Identities = 40/154 (25%), Positives = 55/154 (35%), Gaps = 29/154 (18%)

Query: 163 NLPQNGRQCYSCK---GNSTH-----------GCSSEETFLIDCRGPMNQ-CLVATGTHE 207
           ++ ++GR C SCK     STH            C S E  L  C    N  C    GT  
Sbjct: 86  HISEDGRDCISCKYGQDYSTHWNDLLFCLRCTRCDSGEVELSPCTTTRNTVCQCEEGTFR 145

Query: 208 PKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTK-SGCNH----PDLDVQYRSGAA 262
            ++   M R C T        +GD    +  D+ C  K SG  H    P ++    S   
Sbjct: 146 EEDSPEMCRKCRTGCPRGMVKVGDCTPWS--DIECVHKESGTKHSGEVPAVEETVTSSPG 203

Query: 263 PQPGPAHLS-------LTITLLMTARLWGGTLLW 289
               P  LS       +   +L+ A     +LLW
Sbjct: 204 TPASPCSLSGIIIGVTVAAVVLIVAVFVCKSLLW 237


>gi|42544151 AMME chromosomal region gene 1-like [Homo sapiens]
          Length = 310

 Score = 33.1 bits (74), Expect = 0.29
 Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 4/93 (4%)

Query: 192 CRGPMNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHP 251
           C G     L  +GTH   NQS  V G ++  +  H H+    S    +VS  T    N P
Sbjct: 18  CCGVKKPKLSGSGTHSHGNQSTTVPGSSSGPLQNHQHVDS--SSGRENVSDLTLGPGNSP 75

Query: 252 DLDVQYRSGA-APQPGP-AHLSLTITLLMTARL 282
              +   SGA +P P P    + T  L++TA +
Sbjct: 76  ITRMNPASGALSPLPRPNGTANTTKNLVVTAEM 108


>gi|61743980 stabilin 2 precursor [Homo sapiens]
          Length = 2551

 Score = 31.6 bits (70), Expect = 0.85
 Identities = 35/132 (26%), Positives = 48/132 (36%), Gaps = 30/132 (22%)

Query: 112 SRYLECISCGSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEVLELEN--LPQNGR 169
           SR  ECI  G+   +C         C+            W   G +  E+ N  LP  G 
Sbjct: 880 SRNAECIKTGTGTHTCV--------CQQG----------WTGNGRDCSEINNCLLPSAGG 921

Query: 170 QCY---SCK--GNSTHGCSSEETFL---IDCRGPMNQCLVATGTHEPKNQSYMVRGCATA 221
            C+   SC   G   + C  ++ F    IDC  P+  CL  TG   P            +
Sbjct: 922 -CHDNASCLYVGPGQNECECKKGFRGNGIDCE-PITSCLEQTGKCHPLASCQSTSSGVWS 979

Query: 222 SMCQHAHLGDAF 233
            +CQ  + GD F
Sbjct: 980 CVCQEGYEGDGF 991



 Score = 28.5 bits (62), Expect = 7.2
 Identities = 38/150 (25%), Positives = 54/150 (36%), Gaps = 20/150 (13%)

Query: 98   CNQGNSGRA--VTYSRSRYLECISCGSSDMS-CERGRHQSLQCRSPEEQCLDVVTHWIQE 154
            CN G +G A  + +      +C+ CG SD   C+ G   S QC      C    T    +
Sbjct: 1988 CNTGFNGTACEMCWPGRFGPDCLPCGCSDHGQCDDGITGSGQCL-----CETGWTGPSCD 2042

Query: 155  GEEVLELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYM 214
             + VL     P       +CK N+T  C+      +D  G    C V     +       
Sbjct: 2043 TQAVLPAVCTPPCSAHA-TCKENNTCECN------LDYEGDGITCTVVDFCKQDNGGCAK 2095

Query: 215  VRGCA-----TASMCQHAHLGDAFSMNHID 239
            V  C+      +  CQ  + GD  S   ID
Sbjct: 2096 VARCSQKGTKVSCSCQKGYKGDGHSCTEID 2125


>gi|27437045 colony stimulating factor 3 receptor isoform d
           precursor [Homo sapiens]
          Length = 783

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 23/78 (29%)

Query: 228 HLGDAFSMNHIDVSCCTKSGCNH--PDLDVQYRSGAAPQPGP----------------AH 269
           HLGD      I  SC  K  C+H  P+  + +R GA  QPG                  H
Sbjct: 37  HLGDP-----ITASCIIKQNCSHLDPEPQILWRLGAELQPGGRQQRLSDGTQESIITLPH 91

Query: 270 LSLTITLLMTARLWGGTL 287
           L+ T   L     WG +L
Sbjct: 92  LNHTQAFLSCCLNWGNSL 109


>gi|24496783 colony stimulating factor 3 receptor isoform c
           precursor [Homo sapiens]
          Length = 863

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 23/78 (29%)

Query: 228 HLGDAFSMNHIDVSCCTKSGCNH--PDLDVQYRSGAAPQPGP----------------AH 269
           HLGD      I  SC  K  C+H  P+  + +R GA  QPG                  H
Sbjct: 37  HLGDP-----ITASCIIKQNCSHLDPEPQILWRLGAELQPGGRQQRLSDGTQESIITLPH 91

Query: 270 LSLTITLLMTARLWGGTL 287
           L+ T   L     WG +L
Sbjct: 92  LNHTQAFLSCCLNWGNSL 109


>gi|27437042 colony stimulating factor 3 receptor isoform b
           precursor [Homo sapiens]
          Length = 769

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 23/78 (29%)

Query: 228 HLGDAFSMNHIDVSCCTKSGCNH--PDLDVQYRSGAAPQPGP----------------AH 269
           HLGD      I  SC  K  C+H  P+  + +R GA  QPG                  H
Sbjct: 37  HLGDP-----ITASCIIKQNCSHLDPEPQILWRLGAELQPGGRQQRLSDGTQESIITLPH 91

Query: 270 LSLTITLLMTARLWGGTL 287
           L+ T   L     WG +L
Sbjct: 92  LNHTQAFLSCCLNWGNSL 109


>gi|4503081 colony stimulating factor 3 receptor isoform a precursor
           [Homo sapiens]
          Length = 836

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 23/78 (29%)

Query: 228 HLGDAFSMNHIDVSCCTKSGCNH--PDLDVQYRSGAAPQPGP----------------AH 269
           HLGD      I  SC  K  C+H  P+  + +R GA  QPG                  H
Sbjct: 37  HLGDP-----ITASCIIKQNCSHLDPEPQILWRLGAELQPGGRQQRLSDGTQESIITLPH 91

Query: 270 LSLTITLLMTARLWGGTL 287
           L+ T   L     WG +L
Sbjct: 92  LNHTQAFLSCCLNWGNSL 109


>gi|224494026 tumor necrosis factor receptor superfamily, member 10b
           isoform 2 precursor [Homo sapiens]
          Length = 411

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 27/98 (27%), Positives = 36/98 (36%), Gaps = 17/98 (17%)

Query: 163 NLPQNGRQCYSCK---GNSTH-----------GCSSEETFLIDCRGPMNQ-CLVATGTHE 207
           ++ ++GR C SCK     STH            C S E  L  C    N  C    GT  
Sbjct: 86  HISEDGRDCISCKYGQDYSTHWNDLLFCLRCTRCDSGEVELSPCTTTRNTVCQCEEGTFR 145

Query: 208 PKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTK 245
            ++   M R C T        +GD    +  D+ C  K
Sbjct: 146 EEDSPEMCRKCRTGCPRGMVKVGDCTPWS--DIECVHK 181


>gi|62122917 filaggrin family member 2 [Homo sapiens]
          Length = 2391

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 49/201 (24%), Positives = 73/201 (36%), Gaps = 42/201 (20%)

Query: 55  EEGEELELVEKSCTHSEKTNRTLS-------YRTGLKITSLTEVVCGLDLCNQGNSGRAV 107
           E GEE E    S +   K +  LS       + +    + + E   G      G+SGR  
Sbjct: 218 ESGEEYESGSGSNSWERKGHGGLSCGLETSGHESNSTQSRIREQKLGSSCSGSGDSGR-- 275

Query: 108 TYSRSRYLECISCGSSDMS-CERGRHQSLQCRSPEEQCLDVVTHWIQEGEEVLELENLPQ 166
              RS      +CG S+ S C R ++ S  C+S           +  +G +   +++  Q
Sbjct: 276 ---RSH-----ACGYSNSSGCGRPQNASSSCQSHR---------FGGQGNQFSYIQSGCQ 318

Query: 167 NGRQCYSCKGNSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMVRGCATASMCQH 226
           +G      KG   HGC S         G  + C        P +QSY  RG       Q 
Sbjct: 319 SG-----IKGGQGHGCVSG--------GQPSGC--GQPESNPCSQSYSQRGYGARENGQP 363

Query: 227 AHLGDAFSMNHIDVSCCTKSG 247
            + G  +       SCC + G
Sbjct: 364 QNCGGQWRTGSSQSSCCGQYG 384


>gi|29294643 secreted Ly6/uPAR related protein 2 isoform b [Homo
          sapiens]
          Length = 97

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 7  LPLLLLLHTCVPASWGLRCMQCKTNGDC-RVEECALGQDLCRTTIVRLWEEGEELELVEK 65
          L L  +L   + A+  + C QC   G C     C      C TT  R+    E+L LV K
Sbjct: 7  LLLAAVLSLQLAAAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVTK 66

Query: 66 SC 67
           C
Sbjct: 67 MC 68


>gi|116812604 LY6/PLAUR domain containing 1 isoform b [Homo sapiens]
          Length = 89

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 8/70 (11%)

Query: 216 RGCATASMCQHAHLG-----DAFSMNHIDVSCCTKSGCNHPDLDVQYRSGAAPQPGPAHL 270
           + CA+++ C  A  G         +N + +SCC    CN P    +  S +A +PG   L
Sbjct: 17  KSCASSAACLIASAGYQSFCSPGKLNSVCISCCNTPLCNGPRPKKRGSSASALRPG---L 73

Query: 271 SLTITLLMTA 280
             TI  L  A
Sbjct: 74  RTTILFLKLA 83


>gi|161333835 activin A receptor, type IC isoform 2 [Homo sapiens]
          Length = 443

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 234 SMNHIDVSCCTKSGCNHPDLDVQYRSGAAPQPGPAHLSLTITL 276
           S N     CC    CN+  L +   S  AP+ GP  L++ IT+
Sbjct: 28  SNNVTKTECCFTDFCNNITLHLPTASPNAPKLGPMELAIIITV 70


>gi|161333833 activin A receptor, type IC isoform 1 [Homo sapiens]
          Length = 493

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 234 SMNHIDVSCCTKSGCNHPDLDVQYRSGAAPQPGPAHLSLTITL 276
           S N     CC    CN+  L +   S  AP+ GP  L++ IT+
Sbjct: 78  SNNVTKTECCFTDFCNNITLHLPTASPNAPKLGPMELAIIITV 120


>gi|169162953 PREDICTED: RANBP2-like and GRIP domain containing 8
           [Homo sapiens]
          Length = 1765

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 18/110 (16%)

Query: 51  VRLWEEGEELELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYS 110
           +RL E     + ++ +  H  +  R ++ R+ L+  S                   V  +
Sbjct: 169 IRLVELYRSTKRLKDAVAHCHEAERNIALRSSLEWNS------------------CVVQT 210

Query: 111 RSRYLECISCGSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEVLE 160
              YLE + C  SD S  R  +  L         L + T  +QE  E+LE
Sbjct: 211 LKEYLESLQCLESDKSDWRATNTDLLLAYANLMLLTLSTRDVQENRELLE 260


>gi|29337281 Ly-6 neurotoxin-like protein 1 isoform a [Homo sapiens]
          Length = 131

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 1/54 (1%)

Query: 15  TCVPASWGLRCMQCKTNGDC-RVEECALGQDLCRTTIVRLWEEGEELELVEKSC 67
           T   A+  + C QC   G C     C      C TT  R+    E+L LV K C
Sbjct: 49  TRTSAAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVTKMC 102


>gi|75709184 contactin 3 [Homo sapiens]
          Length = 1028

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 3/77 (3%)

Query: 82  GLKITSLTEVVCGLDLC---NQGNSGRAVTYSRSRYLECISCGSSDMSCERGRHQSLQCR 138
           GLKI ++T+   G   C   NQ       T+        I+   S+M    G    L C+
Sbjct: 463 GLKIANVTKADAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSNMDVSVGESVILPCQ 522

Query: 139 SPEEQCLDVVTHWIQEG 155
              +  LD++  W   G
Sbjct: 523 VQHDPLLDIIFTWYFNG 539


>gi|110349719 titin isoform N2-A [Homo sapiens]
          Length = 33423

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%)

Query: 154  EGEEVLELENLPQNGRQCYSCKGNSTHGCS--SEETFLID 191
            E + +LEL NL    R  YSCK ++  G      E  +ID
Sbjct: 3603 ENKHILELSNLTIQDRGVYSCKASNKFGADICQAELIIID 3642


>gi|194328809 latent transforming growth factor beta binding protein
           3 isoform 1 [Homo sapiens]
          Length = 1303

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 3   HPPLLPLLLLLHTC-VPASWGLRCMQCKTNGDCRVEE-CALGQ 43
           HP    L   L  C V  +WG RC +C T+G    +E C  G+
Sbjct: 417 HPLTTRLTRQLCCCSVGKAWGARCQRCPTDGTAAFKEICPAGK 459


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.133    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,479,658
Number of Sequences: 37866
Number of extensions: 641000
Number of successful extensions: 1643
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 1599
Number of HSP's gapped (non-prelim): 69
length of query: 290
length of database: 18,247,518
effective HSP length: 101
effective length of query: 189
effective length of database: 14,423,052
effective search space: 2725956828
effective search space used: 2725956828
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.