Guide to the Human Genome
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Name: LYPD5 Sequence: fasta or formatted (208aa) NCBI GI: 164663808
Description:

LY6/PLAUR domain containing 5 isoform B

Not currently referenced in the text

Other entries for this name:
alt prot {251aa} LY6/PLAUR domain containing 5 isoform A
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         18           1
 C cysteine            7.2         15           2
 D aspartate           4.8         10           2
 E glutamate           2.4          5           1
 F phenylalanine       1.9          4           1
 G glycine             7.2         15           1
 H histidine           2.9          6           1
 I isoleucine          2.9          6           1
 K lysine              1.9          4           1
 L leucine             9.6         20           3
 M methionine          1.9          4           1
 N asparagine          2.9          6           1
 P proline             8.7         18           2
 Q glutamine           5.3         11           1
 R arginine            5.3         11           2
 S serine              7.7         16           1
 T threonine           9.6         20           2
 V valine              5.8         12           2
 W tryptophan          1.0          2           1
 Y tyrosine            2.4          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   LY6/PLAUR domain containing 5 isoform B 
LYPD5                 1.000   LY6/PLAUR domain containing 5 isoform A 
LYPD3                 0.124   GPI-anchored metastasis-associated protein homolog [...
PLAUR                 0.038   plasminogen activator, urokinase receptor isoform 1 p...
PLAUR                 0.024   plasminogen activator, urokinase receptor isoform 3 ...
ACVR2A                0.024   activin A receptor, type IIA precursor 
LYPD4                 0.024   LY6/PLAUR domain containing 4 
PLAUR                 0.022   plasminogen activator, urokinase receptor isoform 2 ...
SPACA4                0.022   sperm acrosomal membrane protein 14 
OTOG                  0.017   PREDICTED: otogelin isoform 1 
OTOG                  0.017   PREDICTED: otogelin isoform 2 
OTOG                  0.017   PREDICTED: otogelin isoform 2 
OTOG                  0.017   PREDICTED: otogelin isoform 1 
OTOG                  0.017   PREDICTED: otogelin isoform 2 
OTOG                  0.017   PREDICTED: otogelin isoform 1 
TEX101                0.014   testis expressed 101 isoform 1 
TEX101                0.014   testis expressed 101 isoform 2 
CD320                 0.012   8D6 antigen 
LYPD6                 0.012   LY6/PLAUR domain containing 6 
LYNX1                 0.012   secreted Ly6/uPAR related protein 2 isoform b 
LPA                   0.012   lipoprotein Lp(a) precursor 
LYNX1                 0.012   Ly-6 neurotoxin-like protein 1 isoform a 
GRN                   0.010   granulin precursor 
KRTAP4-8              0.010   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.010   PREDICTED: similar to keratin associated protein 4-...
TNK2                  0.010   tyrosine kinase, non-receptor, 2 isoform 1 
DYNC1H1               0.007   cytoplasmic dynein 1 heavy chain 1 
ACVRL1                0.007   activin A receptor type II-like 1 
ACVRL1                0.007   activin A receptor type II-like 1 
ACVR2B                0.007   activin A receptor, type IIB precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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