Guide to the Human Genome
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Name: PLAUR Sequence: fasta or formatted (281aa) NCBI GI: 53829379
Description:

plasminogen activator, urokinase receptor isoform 2 precursor

Referenced in:

Coagulation
Additional Genes in Development

Other entries for this name:
alt prot [335aa] plasminogen activator, urokinase receptor isoform 1 precursor
alt prot [290aa] plasminogen activator, urokinase receptor isoform 3 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.5          7           1
 C cysteine            9.6         27           2
 D aspartate           3.2          9           2
 E glutamate           8.9         25           2
 F phenylalanine       1.4          4           1
 G glycine             8.9         25           1
 H histidine           3.9         11           1
 I isoleucine          2.1          6           1
 K lysine              3.2          9           1
 L leucine            11.4         32           5
 M methionine          1.4          4           1
 N asparagine          4.6         13           2
 P proline             5.0         14           2
 Q glutamine           3.9         11           1
 R arginine            6.8         19           1
 S serine              7.8         22           2
 T threonine           7.8         22           2
 V valine              3.9         11           2
 W tryptophan          1.8          5           1
 Y tyrosine            1.8          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   plasminogen activator, urokinase receptor isoform 2 ... 
PLAUR                 0.890   plasminogen activator, urokinase receptor isoform 1 p...
PLAUR                 0.671   plasminogen activator, urokinase receptor isoform 3 ...
LYPD3                 0.036   GPI-anchored metastasis-associated protein homolog [...
TRIM39                0.019   tripartite motif-containing 39 isoform 2 
TRIM39                0.019   tripartite motif-containing 39 isoform 1 
CD83                  0.015   CD83 antigen isoform b 
CD83                  0.015   CD83 antigen isoform a 
LYPD5                 0.015   LY6/PLAUR domain containing 5 isoform A 
LYPD5                 0.015   LY6/PLAUR domain containing 5 isoform B 
LOC390940             0.014   PREDICTED: similar to R28379_1 
LOC390940             0.014   PREDICTED: similar to R28379_1 
LOC390940             0.014   PREDICTED: similar to R28379_1 
ATXN1                 0.010   ataxin 1 
ATXN1                 0.010   ataxin 1 
LOC100292811          0.010   PREDICTED: similar to proprotein convertase subtili...
LOC100290671          0.010   PREDICTED: hypothetical protein XP_002347099 
LOC100289618          0.010   PREDICTED: hypothetical protein XP_002342982 
KCP                   0.010   cysteine rich BMP regulator 2 isoform 2 
SEC14L5               0.008   SEC14-like 5 
VWCE                  0.008   von Willebrand factor C and EGF domains 
LYNX1                 0.008   secreted Ly6/uPAR related protein 2 isoform b 
FBN1                  0.007   fibrillin 1 precursor 
CNTN3                 0.007   contactin 3 
LYNX1                 0.007   Ly-6 neurotoxin-like protein 1 isoform a 
LTBP3                 0.005   latent transforming growth factor beta binding prot...
LTBP3                 0.005   latent transforming growth factor beta binding prote...
ZNF215                0.005   zinc finger protein 215 
LOC100288207          0.005   PREDICTED: similar to RIKEN cDNA D730001G18 
LOC100288207          0.005   PREDICTED: hypothetical protein XP_002342921 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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