Guide to the Human Genome
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Name: OR8B12 Sequence: fasta or formatted (310aa) NCBI GI: 52353350
Description:

olfactory receptor, family 8, subfamily B, member 12

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         15           2
 C cysteine            3.2         10           1
 D aspartate           1.9          6           1
 E glutamate           2.3          7           1
 F phenylalanine       9.4         29           3
 G glycine             5.8         18           1
 H histidine           2.3          7           1
 I isoleucine          7.7         24           2
 K lysine              2.9          9           1
 L leucine            14.5         45           5
 M methionine          4.5         14           1
 N asparagine          4.5         14           1
 P proline             3.5         11           1
 Q glutamine           1.3          4           1
 R arginine            2.6          8           2
 S serine             10.3         32           2
 T threonine           6.5         20           2
 V valine              8.4         26           2
 W tryptophan          0.0          0           0
 Y tyrosine            3.5         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 8, subfamily B, member 12... 
OR8B8                 0.815   olfactory receptor, family 8, subfamily B, member 8 ...
OR8B3                 0.684   olfactory receptor, family 8, subfamily B, member 3 ...
OR8B2                 0.684   olfactory receptor, family 8, subfamily B, member 2 ...
OR8B4                 0.629   olfactory receptor, family 8, subfamily B, member 4 ...
OR8G1                 0.621   olfactory receptor, family 8, subfamily G, member 1 ...
OR8G5                 0.600   olfactory receptor, family 8, subfamily G, member 5 ...
OR8A1                 0.592   olfactory receptor, family 8, subfamily A, member 1 ...
OR8D1                 0.587   olfactory receptor, family 8, subfamily D, member 1 ...
OR8G2                 0.561   olfactory receptor, family 8, subfamily G, member 2 ...
OR8D4                 0.560   olfactory receptor, family 8, subfamily D, member 4 ...
OR8D2                 0.553   olfactory receptor, family 8, subfamily D, member 2 ...
OR5B12                0.526   olfactory receptor, family 5, subfamily B, member 12...
OR8U8                 0.498   olfactory receptor, family 8, subfamily U, member 8 ...
OR8U1                 0.493   olfactory receptor, family 8, subfamily U, member 1 ...
OR5AR1                0.493   olfactory receptor, family 5, subfamily AR, member 1...
OR5A2                 0.491   olfactory receptor, family 5, subfamily A, member 2 ...
OR5D18                0.491   olfactory receptor, family 5, subfamily D, member 18...
OR8J3                 0.490   olfactory receptor, family 8, subfamily J, member 3 ...
OR5AU1                0.490   olfactory receptor, family 5, subfamily AU, member 1...
OR8U9                 0.478   olfactory receptor, family 8, subfamily U, member 9 ...
OR8J1                 0.474   olfactory receptor, family 8, subfamily J, member 1 ...
OR8I2                 0.471   olfactory receptor, family 8, subfamily I, member 2 ...
OR5R1                 0.471   olfactory receptor, family 5, subfamily R, member 1 ...
OR8K3                 0.468   olfactory receptor, family 8, subfamily K, member 3 ...
OR5W2                 0.468   olfactory receptor, family 5, subfamily W, member 2 ...
OR5L1                 0.464   olfactory receptor, family 5, subfamily L, member 1 ...
OR5AP2                0.464   olfactory receptor, family 5, subfamily AP, member 2...
OR5A1                 0.461   olfactory receptor, family 5, subfamily A, member 1 ...
OR5F1                 0.461   olfactory receptor, family 5, subfamily F, member 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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