Search of human proteins with 52486734

Search of human proteins with 52486734

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|52486734 family with sequence similarity 19 (chemokine (C-C
motif)-like), member A3 isoform 2 [Homo sapiens]
         (169 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|52486734 family with sequence similarity 19 (chemokine (C-C m...   360   e-100
gi|33300649 family with sequence similarity 19 (chemokine (C-C m...   189   7e-49
gi|30425496 family with sequence similarity 19 (chemokine (C-C m...    96   1e-20
gi|32698882 family with sequence similarity 19 (chemokine (C-C m...    95   3e-20
gi|53988383 family with sequence similarity 19 (chemokine (C-C m...    95   3e-20
gi|50962799 family with sequence similarity 19 (chemokine (C-C m...    89   1e-18
gi|131887988 family with sequence similarity 19 (chemokine (C-C ...    55   2e-08
gi|53933210 family with sequence similarity 19 (chemokine (C-C m...    53   1e-07
gi|239754597 PREDICTED: hypothetical protein [Homo sapiens]            30   0.76 
gi|239749137 PREDICTED: hypothetical protein XP_002346922 [Homo ...    30   0.76 
gi|239743209 PREDICTED: hypothetical protein XP_002342803 [Homo ...    30   0.76 
gi|239508884 PREDICTED: hypothetical protein [Homo sapiens]            30   0.76 
gi|75750474 spectrin domain with coiled-coils 1 NSP5a3b [Homo sa...    30   1.3  
gi|75750472 spectrin domain with coiled-coils 1 NSP5b3b [Homo sa...    30   1.3  
gi|187828892 calcium channel, alpha 1A subunit isoform 4 [Homo s...    29   1.7  
gi|149944474 ATPase, class V, type 10B [Homo sapiens]                  29   2.2  
gi|239755629 PREDICTED: hypothetical protein [Homo sapiens]            28   2.9  
gi|239754342 PREDICTED: hypothetical protein [Homo sapiens]            28   2.9  
gi|239744431 PREDICTED: hypothetical protein XP_002343158 [Homo ...    28   2.9  
gi|209571521 cysteine rich BMP regulator 2 isoform 2 [Homo sapiens]    28   2.9  
gi|209571519 cysteine rich BMP regulator 2 isoform 1 [Homo sapiens]    28   2.9  
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]              28   2.9  
gi|150378549 tangerin [Homo sapiens]                                   28   2.9  
gi|224465209 phosphoseryl-tRNA kinase [Homo sapiens]                   28   3.8  
gi|32698704 tectonin beta-propeller repeat containing 1 [Homo sa...    28   3.8  
gi|67782330 trinucleotide repeat containing 6B isoform 3 [Homo s...    28   4.9  
gi|239750101 PREDICTED: hypothetical protein [Homo sapiens]            28   4.9  
gi|93102379 low density lipoprotein-related protein 1B precursor...    28   4.9  
gi|7656983 TP53-target gene 5 protein [Homo sapiens]                   28   4.9  
gi|126012562 low density lipoprotein-related protein 1 [Homo sap...    27   6.4  

>gi|52486734 family with sequence similarity 19 (chemokine (C-C
           motif)-like), member A3 isoform 2 [Homo sapiens]
          Length = 169

 Score =  360 bits (923), Expect = e-100
 Identities = 169/169 (100%), Positives = 169/169 (100%)

Query: 1   MSERVERNWSTGGWLLALCLAWLWTHLTLAALQPPTATVLVQQGTCEVIAAHRCCNRNRI 60
           MSERVERNWSTGGWLLALCLAWLWTHLTLAALQPPTATVLVQQGTCEVIAAHRCCNRNRI
Sbjct: 1   MSERVERNWSTGGWLLALCLAWLWTHLTLAALQPPTATVLVQQGTCEVIAAHRCCNRNRI 60

Query: 61  EERSQTVKCSCFSGQVAGTTRAKPSCVDDLLLAAHCARRDPRAALRLLLPQPPSSCRDGG 120
           EERSQTVKCSCFSGQVAGTTRAKPSCVDDLLLAAHCARRDPRAALRLLLPQPPSSCRDGG
Sbjct: 61  EERSQTVKCSCFSGQVAGTTRAKPSCVDDLLLAAHCARRDPRAALRLLLPQPPSSCRDGG 120

Query: 121 VRWSPACRGRSVRCSRTCRDGAAAVDTKSKPPRSHDSSWGSRPGQERLD 169
           VRWSPACRGRSVRCSRTCRDGAAAVDTKSKPPRSHDSSWGSRPGQERLD
Sbjct: 121 VRWSPACRGRSVRCSRTCRDGAAAVDTKSKPPRSHDSSWGSRPGQERLD 169


>gi|33300649 family with sequence similarity 19 (chemokine (C-C
          motif)-like), member A3 isoform 1 [Homo sapiens]
          Length = 133

 Score =  189 bits (481), Expect = 7e-49
 Identities = 88/88 (100%), Positives = 88/88 (100%)

Query: 1  MSERVERNWSTGGWLLALCLAWLWTHLTLAALQPPTATVLVQQGTCEVIAAHRCCNRNRI 60
          MSERVERNWSTGGWLLALCLAWLWTHLTLAALQPPTATVLVQQGTCEVIAAHRCCNRNRI
Sbjct: 1  MSERVERNWSTGGWLLALCLAWLWTHLTLAALQPPTATVLVQQGTCEVIAAHRCCNRNRI 60

Query: 61 EERSQTVKCSCFSGQVAGTTRAKPSCVD 88
          EERSQTVKCSCFSGQVAGTTRAKPSCVD
Sbjct: 61 EERSQTVKCSCFSGQVAGTTRAKPSCVD 88


>gi|30425496 family with sequence similarity 19 (chemokine (C-C
          motif)-like), member A2 [Homo sapiens]
          Length = 131

 Score = 95.9 bits (237), Expect = 1e-20
 Identities = 48/88 (54%), Positives = 60/88 (68%), Gaps = 2/88 (2%)

Query: 1  MSERVERNWSTGGWLLALCLAWLWTHLTLAALQPPTATVLVQQGTCEVIAAHRCCNRNRI 60
          MS+R  +  + G  L+ + +  LW  +  +A       V  + GTCEV+A HRCCN+N+I
Sbjct: 1  MSKRYLQKATKGKLLIIIFIVTLWGKVVSSANHHKAHHV--KTGTCEVVALHRCCNKNKI 58

Query: 61 EERSQTVKCSCFSGQVAGTTRAKPSCVD 88
          EERSQTVKCSCF GQVAGTTRA PSCVD
Sbjct: 59 EERSQTVKCSCFPGQVAGTTRAAPSCVD 86


>gi|32698882 family with sequence similarity 19 (chemokine (C-C
          motif)-like), member A4 [Homo sapiens]
          Length = 140

 Score = 95.1 bits (235), Expect = 3e-20
 Identities = 40/48 (83%), Positives = 46/48 (95%)

Query: 41 VQQGTCEVIAAHRCCNRNRIEERSQTVKCSCFSGQVAGTTRAKPSCVD 88
          ++QGTCEV+A HRCCN+NRIEERSQTVKCSCF GQVAGTTRA+PSCV+
Sbjct: 48 IKQGTCEVVAVHRCCNKNRIEERSQTVKCSCFPGQVAGTTRAQPSCVE 95


>gi|53988383 family with sequence similarity 19 (chemokine (C-C
          motif)-like), member A4 [Homo sapiens]
          Length = 140

 Score = 95.1 bits (235), Expect = 3e-20
 Identities = 40/48 (83%), Positives = 46/48 (95%)

Query: 41 VQQGTCEVIAAHRCCNRNRIEERSQTVKCSCFSGQVAGTTRAKPSCVD 88
          ++QGTCEV+A HRCCN+NRIEERSQTVKCSCF GQVAGTTRA+PSCV+
Sbjct: 48 IKQGTCEVVAVHRCCNKNRIEERSQTVKCSCFPGQVAGTTRAQPSCVE 95


>gi|50962799 family with sequence similarity 19 (chemokine (C-C
          motif)-like), member A1 [Homo sapiens]
          Length = 133

 Score = 89.4 bits (220), Expect = 1e-18
 Identities = 39/45 (86%), Positives = 42/45 (93%)

Query: 44 GTCEVIAAHRCCNRNRIEERSQTVKCSCFSGQVAGTTRAKPSCVD 88
          GTCEVIAAHRCCN+NRIEERSQTVKCSC  G+VAGTTR +PSCVD
Sbjct: 42 GTCEVIAAHRCCNKNRIEERSQTVKCSCLPGKVAGTTRNRPSCVD 86


>gi|131887988 family with sequence similarity 19 (chemokine (C-C
          motif)-like), member A5 isoform 1 [Homo sapiens]
          Length = 132

 Score = 55.5 bits (132), Expect = 2e-08
 Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 24 WTHLTLAALQPPTATVLVQQGTCEVIAAHRCCNRNRIEERSQTVKCSCFSGQVAGTTRAK 83
          W  + LA+L     + L   GTCE++   R  ++ R     QT +C+C  GQ+AGTTRA+
Sbjct: 24 WAFMILASLLIAYCSQLAA-GTCEIVTLDRDSSQPRRTIARQTARCACRKGQIAGTTRAR 82

Query: 84 PSCVD 88
          P+CVD
Sbjct: 83 PACVD 87


>gi|53933210 family with sequence similarity 19 (chemokine (C-C
          motif)-like), member A5 isoform 2 [Homo sapiens]
          Length = 125

 Score = 53.1 bits (126), Expect = 1e-07
 Identities = 22/45 (48%), Positives = 31/45 (68%)

Query: 44 GTCEVIAAHRCCNRNRIEERSQTVKCSCFSGQVAGTTRAKPSCVD 88
          GTCE++   R  ++ R     QT +C+C  GQ+AGTTRA+P+CVD
Sbjct: 36 GTCEIVTLDRDSSQPRRTIARQTARCACRKGQIAGTTRARPACVD 80


>gi|239754597 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 170

 Score = 30.4 bits (67), Expect = 0.76
 Identities = 14/39 (35%), Positives = 19/39 (48%)

Query: 97  ARRDPRAALRLLLPQPPSSCRDGGVRWSPACRGRSVRCS 135
           AR  P   +R   P+P S  R   + WSP   G+ +R S
Sbjct: 121 ARTQPPGGVRPREPEPESQGRRASLEWSPGPSGKGLRAS 159


>gi|239749137 PREDICTED: hypothetical protein XP_002346922 [Homo
           sapiens]
          Length = 170

 Score = 30.4 bits (67), Expect = 0.76
 Identities = 14/39 (35%), Positives = 19/39 (48%)

Query: 97  ARRDPRAALRLLLPQPPSSCRDGGVRWSPACRGRSVRCS 135
           AR  P   +R   P+P S  R   + WSP   G+ +R S
Sbjct: 121 ARTQPPGGVRPREPEPESQGRRASLEWSPGPSGKGLRAS 159


>gi|239743209 PREDICTED: hypothetical protein XP_002342803 [Homo
           sapiens]
          Length = 170

 Score = 30.4 bits (67), Expect = 0.76
 Identities = 14/39 (35%), Positives = 19/39 (48%)

Query: 97  ARRDPRAALRLLLPQPPSSCRDGGVRWSPACRGRSVRCS 135
           AR  P   +R   P+P S  R   + WSP   G+ +R S
Sbjct: 121 ARTQPPGGVRPREPEPESQGRRASLEWSPGPSGKGLRAS 159


>gi|239508884 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 170

 Score = 30.4 bits (67), Expect = 0.76
 Identities = 14/39 (35%), Positives = 19/39 (48%)

Query: 97  ARRDPRAALRLLLPQPPSSCRDGGVRWSPACRGRSVRCS 135
           AR  P   +R   P+P S  R   + WSP   G+ +R S
Sbjct: 121 ARTQPPGGVRPREPEPESQGRRASLEWSPGPSGKGLRAS 159


>gi|75750474 spectrin domain with coiled-coils 1 NSP5a3b [Homo
           sapiens]
          Length = 987

 Score = 29.6 bits (65), Expect = 1.3
 Identities = 40/160 (25%), Positives = 60/160 (37%), Gaps = 29/160 (18%)

Query: 36  TATVLVQQGTCEVIAAHRCCNRNRIEERSQTVKCSCFSGQVAG-----TTRAKPSCVDDL 90
           TA V+     CE     R   R  +EE  +  +     G V G     T+RA P  VD+ 
Sbjct: 649 TAVVVANDIKCEAQQELRTVKRKLLEEEEKNARLQKELGDVQGHGRVVTSRAAPPPVDEE 708

Query: 91  LLAAH--CARRDPRAALRLLLPQPPSSCR---------DGGVRWSPACRGRSVRCSRTCR 139
             ++    A R P   +    P PP S           D G    P   G+++   +T R
Sbjct: 709 PESSEVDAAGRWPGVCVSRTSPTPPESATTVKSLIKSFDLG---RPGGAGQNISVHKTPR 765

Query: 140 DGAAAVDTKSKP-----PRSHDSSWGS-RPGQ----ERLD 169
              + +  ++ P     P    S++ S RP      +RLD
Sbjct: 766 SPLSGIPVRTAPAAAVSPMQRHSTYSSVRPASRGVTQRLD 805


>gi|75750472 spectrin domain with coiled-coils 1 NSP5b3b [Homo
           sapiens]
          Length = 1068

 Score = 29.6 bits (65), Expect = 1.3
 Identities = 40/160 (25%), Positives = 60/160 (37%), Gaps = 29/160 (18%)

Query: 36  TATVLVQQGTCEVIAAHRCCNRNRIEERSQTVKCSCFSGQVAG-----TTRAKPSCVDDL 90
           TA V+     CE     R   R  +EE  +  +     G V G     T+RA P  VD+ 
Sbjct: 730 TAVVVANDIKCEAQQELRTVKRKLLEEEEKNARLQKELGDVQGHGRVVTSRAAPPPVDEE 789

Query: 91  LLAAH--CARRDPRAALRLLLPQPPSSCR---------DGGVRWSPACRGRSVRCSRTCR 139
             ++    A R P   +    P PP S           D G    P   G+++   +T R
Sbjct: 790 PESSEVDAAGRWPGVCVSRTSPTPPESATTVKSLIKSFDLG---RPGGAGQNISVHKTPR 846

Query: 140 DGAAAVDTKSKP-----PRSHDSSWGS-RPGQ----ERLD 169
              + +  ++ P     P    S++ S RP      +RLD
Sbjct: 847 SPLSGIPVRTAPAAAVSPMQRHSTYSSVRPASRGVTQRLD 886


>gi|187828892 calcium channel, alpha 1A subunit isoform 4 [Homo
            sapiens]
          Length = 2506

 Score = 29.3 bits (64), Expect = 1.7
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)

Query: 82   AKPSCVDDLLLAAHCARRDPRAALRLLLP---QPPSSCRDGGVRW 123
            A+P   D      H + R PR   R+  P   + P +CR GG RW
Sbjct: 2346 AEPLAGDRPPTGGHSSGRSPRMERRVPGPARSESPRACRHGGARW 2390


>gi|149944474 ATPase, class V, type 10B [Homo sapiens]
          Length = 1461

 Score = 28.9 bits (63), Expect = 2.2
 Identities = 18/69 (26%), Positives = 29/69 (42%)

Query: 28  TLAALQPPTATVLVQQGTCEVIAAHRCCNRNRIEERSQTVKCSCFSGQVAGTTRAKPSCV 87
           TL +  P   TV + QGTC   +       + + +R   V     +G++   T+   S +
Sbjct: 737 TLVSRTPEQVTVRLPQGTCLTFSLLCTLGFDSVRKRMSVVVRHPLTGEIVVYTKGADSVI 796

Query: 88  DDLLLAAHC 96
            DLL    C
Sbjct: 797 MDLLEDPAC 805


>gi|239755629 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 92

 Score = 28.5 bits (62), Expect = 2.9
 Identities = 16/38 (42%), Positives = 20/38 (52%)

Query: 131 SVRCSRTCRDGAAAVDTKSKPPRSHDSSWGSRPGQERL 168
           SV   R  R   A+VD++S+  RS  S WGS     RL
Sbjct: 17  SVGWRRARRTSRASVDSQSQGARSWASQWGSAQAAARL 54


>gi|239754342 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 235

 Score = 28.5 bits (62), Expect = 2.9
 Identities = 24/79 (30%), Positives = 28/79 (35%), Gaps = 9/79 (11%)

Query: 81  RAKPSCVDDLLLAAHCARRDPRAALRLLLPQPPSSCRDGGVRWSPACRGRSVRCSRTCRD 140
           RA+P C    L  A      P A  RL      S        WS ACRGR   C R   +
Sbjct: 61  RARPGCRAPFLCTAAVR---PAARQRL-----GSRGAAAATSWSSACRGRGRVCERE-GE 111

Query: 141 GAAAVDTKSKPPRSHDSSW 159
           G+  V  +  P       W
Sbjct: 112 GSRGVGEEGVPAGGRGRGW 130


>gi|239744431 PREDICTED: hypothetical protein XP_002343158 [Homo
           sapiens]
          Length = 92

 Score = 28.5 bits (62), Expect = 2.9
 Identities = 16/38 (42%), Positives = 20/38 (52%)

Query: 131 SVRCSRTCRDGAAAVDTKSKPPRSHDSSWGSRPGQERL 168
           SV   R  R   A+VD++S+  RS  S WGS     RL
Sbjct: 17  SVGWRRARRTSRASVDSQSQGARSWASQWGSAQAAARL 54


>gi|209571521 cysteine rich BMP regulator 2 isoform 2 [Homo sapiens]
          Length = 814

 Score = 28.5 bits (62), Expect = 2.9
 Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 22/99 (22%)

Query: 59  RIEERSQTVKCSCFSGQVAGTTRAKPSCVDDLLLAAHCARRDPRAALRLLLPQPPSSCRD 118
           R++ER   V+CSC +G+V        SC +       CA   P +  +L     P+   D
Sbjct: 382 RLQERGLCVRCSCQAGEV--------SCEEQECPVTPCAL--PASGRQLC----PACELD 427

Query: 119 G-----GVRWSPACRGRSVRCSRTCRDGAAAVDTKSKPP 152
           G     GV+W P  R  +   +  C+DG         PP
Sbjct: 428 GEEFAEGVQWEPDGRPCT---ACVCQDGVPKCGAVLCPP 463


>gi|209571519 cysteine rich BMP regulator 2 isoform 1 [Homo sapiens]
          Length = 1503

 Score = 28.5 bits (62), Expect = 2.9
 Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 22/99 (22%)

Query: 59  RIEERSQTVKCSCFSGQVAGTTRAKPSCVDDLLLAAHCARRDPRAALRLLLPQPPSSCRD 118
           R++ER   V+CSC +G+V        SC +       CA   P +  +L     P+   D
Sbjct: 324 RLQERGLCVRCSCQAGEV--------SCEEQECPVTPCAL--PASGRQLC----PACELD 369

Query: 119 G-----GVRWSPACRGRSVRCSRTCRDGAAAVDTKSKPP 152
           G     GV+W P  R  +   +  C+DG         PP
Sbjct: 370 GEEFAEGVQWEPDGRPCT---ACVCQDGVPKCGAVLCPP 405


>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
          Length = 2400

 Score = 28.5 bits (62), Expect = 2.9
 Identities = 31/128 (24%), Positives = 46/128 (35%), Gaps = 7/128 (5%)

Query: 40  LVQQGTCEVIAAHRCCNRNRIEERSQTVKCSCFSGQVAGTTRAKPSCV----DDLLLAAH 95
           L Q   C  +  H    R R  + S +   S  +G   G+      C     D +  A+ 
Sbjct: 428 LAQHVRCSGLWGHGTAGRERCSQDSASPASS--TGLPEGSEPESSCCPRTPEDGVDSASP 485

Query: 96  CARRDPRAALRLLLPQPPSSCRDGGVRWSPACRGRSVRCSRTCRDGAAAVDTKSKPPRSH 155
            A+          L + P  C DG     P   GR    +R+  +GA++  + S      
Sbjct: 486 SAQIGAERKAGGSLGEDPGLCIDGAGLGGPEQGGRLTPRARS-EEGASSDSSASTGSHEG 544

Query: 156 DSSWGSRP 163
            S WG RP
Sbjct: 545 SSEWGGRP 552


>gi|150378549 tangerin [Homo sapiens]
          Length = 1523

 Score = 28.5 bits (62), Expect = 2.9
 Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 6/81 (7%)

Query: 74   GQVAGTTR---AKPSCVDDLLLAAHCARRDPRAALRLLLPQPPSSCRDGGVRWSPACRGR 130
            G  AGT R   A+PS  DDL       R     A     PQ P    D     +P    R
Sbjct: 1154 GGGAGTYRVGSAQPSPPDDLDAGGLAQRLRGHGAEG---PQEPKEAADRADGAAPGVASR 1210

Query: 131  SVRCSRTCRDGAAAVDTKSKP 151
            +    R  +DG A    +S+P
Sbjct: 1211 NAVAGRASKDGGAEAPRESRP 1231


>gi|224465209 phosphoseryl-tRNA kinase [Homo sapiens]
          Length = 348

 Score = 28.1 bits (61), Expect = 3.8
 Identities = 24/107 (22%), Positives = 39/107 (36%), Gaps = 10/107 (9%)

Query: 25  THLTLAALQPPTATV---LVQQGTCEVIAAHRCCNRNRIEERSQTVKCSCFSGQVAGTTR 81
           T L L AL+ P       + Q+ T  +I     C+ N + +  QT++      Q     +
Sbjct: 240 TDLLLTALENPVKYAEDNMEQKDTDRII-----CSTNILHKTDQTLRR--IVSQTMKEAK 292

Query: 82  AKPSCVDDLLLAAHCARRDPRAALRLLLPQPPSSCRDGGVRWSPACR 128
                  ++       R +  A  R++L      CR   V W   CR
Sbjct: 293 GNQEAFSEMTFKQRWVRANHAAIWRIILGNEHIKCRSAKVGWLQCCR 339


>gi|32698704 tectonin beta-propeller repeat containing 1 [Homo
           sapiens]
          Length = 1165

 Score = 28.1 bits (61), Expect = 3.8
 Identities = 27/112 (24%), Positives = 41/112 (36%), Gaps = 8/112 (7%)

Query: 45  TCEVIAAHRCCNRNRIEERSQTVKCSCFSG-QVAGTTRAKPSCVDDLLLAAHCARRDPRA 103
           T + I A R C+R+     S  +   CF G +V G+  + PS  D    ++   R  P  
Sbjct: 371 TWKAIIAARECDRSHSGSSSSLLSAGCFFGDEVRGSGESAPSDTD---ASSEVERPGPGQ 427

Query: 104 ALRLLLPQPPSSCRDGGVRWSPACRGRSVRCSRTCRDGAAAVDTKSKPPRSH 155
               +LP  P          S +  G       T  D   A  ++   P +H
Sbjct: 428 ----ILPAEPLDDSKNATGNSASGLGAGRTAEDTVEDACPAEGSREARPNTH 475


>gi|67782330 trinucleotide repeat containing 6B isoform 3 [Homo
           sapiens]
          Length = 1029

 Score = 27.7 bits (60), Expect = 4.9
 Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 14/86 (16%)

Query: 98  RRDPRAALRLLLPQPPSSCRDGGVRWSPACRGRSVRCSRT--------CRDGAAAVDTKS 149
           ++D +  L+   P PPS    GG    P C       +             G A V +KS
Sbjct: 134 QQDHKVLLKRGQPPPPSCMLLGGGAGPPPCTAPGANPNNAQVTGALLQSESGTAPVWSKS 193

Query: 150 KPPRSHD--SSWG----SRPGQERLD 169
            PP   +  S+WG    S PG   +D
Sbjct: 194 TPPAPDNGTSAWGEPNESSPGWGEMD 219


>gi|239750101 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 365

 Score = 27.7 bits (60), Expect = 4.9
 Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 5/85 (5%)

Query: 73  SGQVAGTTRAKPS---CVDDLLLAAHCARRDPRAALRLLLPQPPSSCRDGGVRWSPACRG 129
           SG+ A TTR + +      DL   A  +R +PR A     P+PP + R      +P    
Sbjct: 276 SGRAATTTRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAARRPPPPPAPGAPA 335

Query: 130 RSVRCSRTCRDGA--AAVDTKSKPP 152
           R +R  R+    A   AV T S  P
Sbjct: 336 RPLRGRRSHGPAARPRAVPTTSLAP 360


>gi|93102379 low density lipoprotein-related protein 1B precursor
            [Homo sapiens]
          Length = 4599

 Score = 27.7 bits (60), Expect = 4.9
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 4/33 (12%)

Query: 45   TCEVI---AAHRCCNRNRIEERSQTVKCSCFSG 74
            TCE++   + H  C++   E+   TVKCSC+ G
Sbjct: 1211 TCEIVDYCSNHLKCSQV-CEQHKHTVKCSCYEG 1242


>gi|7656983 TP53-target gene 5 protein [Homo sapiens]
          Length = 290

 Score = 27.7 bits (60), Expect = 4.9
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 9/62 (14%)

Query: 106 RLLLPQPPSSCRDGGVRWSPACRGRSVRCSRTCRDGAAAVDTKSKPPRSHDSSWGSRPGQ 165
           R+ LP P   CR   +RW         RC+R C   +A+++     P   D +W    G 
Sbjct: 217 RIHLPAPRVMCRSSTLRWVKR------RCTRFC---SASLEMPMWHPYKVDVTWTRARGA 267

Query: 166 ER 167
            R
Sbjct: 268 SR 269


>gi|126012562 low density lipoprotein-related protein 1 [Homo sapiens]
          Length = 4544

 Score = 27.3 bits (59), Expect = 6.4
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 10/61 (16%)

Query: 38   TVLVQQGTCEVIAAHRCCNRNRI-EERSQTVKCSCFSGQVAGTTRAKPSCVDDLLLAAHC 96
            T   +   CEV    RC     +  ++S  V C+C  G+VA      PSC   L    HC
Sbjct: 4331 TAYFEGSRCEVNKCSRCLEGACVVNKQSGDVTCNCTDGRVA------PSC---LTCVGHC 4381

Query: 97   A 97
            +
Sbjct: 4382 S 4382


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.132    0.446 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,231,738
Number of Sequences: 37866
Number of extensions: 366748
Number of successful extensions: 990
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 974
Number of HSP's gapped (non-prelim): 39
length of query: 169
length of database: 18,247,518
effective HSP length: 95
effective length of query: 74
effective length of database: 14,650,248
effective search space: 1084118352
effective search space used: 1084118352
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.