Guide to the Human Genome
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Name: TP53TG5 Sequence: fasta or formatted (290aa) NCBI GI: 7656983
Description:

TP53-target gene 5 protein

Referenced in:

p53 Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.4         10           2
 C cysteine            2.1          6           1
 D aspartate           2.8          8           2
 E glutamate           7.2         21           2
 F phenylalanine       1.4          4           1
 G glycine             4.5         13           1
 H histidine           2.4          7           1
 I isoleucine          3.4         10           1
 K lysine             11.4         33           3
 L leucine             8.3         24           2
 M methionine          3.1          9           1
 N asparagine          4.5         13           2
 P proline             6.2         18           1
 Q glutamine           4.1         12           1
 R arginine           11.4         33           2
 S serine              9.7         28           2
 T threonine           4.5         13           1
 V valine              5.2         15           1
 W tryptophan          3.1          9           1
 Y tyrosine            1.4          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   TP53-target gene 5 protein 
MAP1A                 0.028   microtubule-associated protein 1A 
ANKRD31               0.024   PREDICTED: ankyrin repeat domain 31 
ANKRD31               0.024   PREDICTED: ankyrin repeat domain 31 
ANKRD31               0.024   PREDICTED: ankyrin repeat domain 31 
SMC4                  0.023   SMC4 structural maintenance of chromosomes 4-like 1 ...
SMC4                  0.023   SMC4 structural maintenance of chromosomes 4-like 1 ...
NIN                   0.019   ninein isoform 4 
NIN                   0.019   ninein isoform 5 
NIN                   0.019   ninein isoform 1 
NIN                   0.019   ninein isoform 2 
CCDC11                0.017   coiled-coil domain containing 11 
SPAG7                 0.017   sperm associated antigen 7 
RNMT                  0.017   RNA (guanine-7-) methyltransferase 
BAT2D1                0.017   HBxAg transactivated protein 2 
SCAPER                0.017   S-phase cyclin A-associated protein in the ER isofo...
RDX                   0.017   radixin 
SCAPER                0.017   S-phase cyclin A-associated protein in the ER isofo...
MNS1                  0.017   meiosis-specific nuclear structural 1 
MSN                   0.014   moesin 
KIAA0947              0.014   hypothetical protein LOC23379 
SLK                   0.012   serine/threonine kinase 2 
MAP9                  0.012   aster-associated protein 
C14orf102             0.012   hypothetical protein LOC55051 isoform 1 
UBN2                  0.012   ubinuclein 2 
CUX1                  0.012   cut-like homeobox 1 isoform a 
CUX1                  0.012   cut-like homeobox 1 isoform c 
CUX1                  0.012   cut-like homeobox 1 isoform b 
ATRX                  0.012   transcriptional regulator ATRX isoform 2 
ATRX                  0.012   transcriptional regulator ATRX isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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