Guide to the Human Genome
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Name: ATP10B Sequence: fasta or formatted (1461aa) NCBI GI: 149944474
Description:

ATPase, class V, type 10B

Referenced in:

Amphipath-transporting ATPase Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         79           2
 C cysteine            2.9         42           2
 D aspartate           5.2         76           2
 E glutamate           6.0         88           2
 F phenylalanine       5.0         73           2
 G glycine             5.3         77           2
 H histidine           2.3         33           2
 I isoleucine          5.5         81           2
 K lysine              4.7         69           2
 L leucine            10.7        157           3
 M methionine          2.7         40           1
 N asparagine          3.6         52           2
 P proline             4.5         66           2
 Q glutamine           4.7         68           2
 R arginine            5.9         86           2
 S serine              9.0        131           3
 T threonine           6.6         97           3
 V valine              5.7         84           3
 W tryptophan          1.4         21           1
 Y tyrosine            2.8         41           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATPase, class V, type 10B 
ATP10D                0.461   ATPase, class V, type 10D 
ATP10A                0.424   ATPase, class V, type 10A 
ATP8B2                0.139   ATPase, class I, type 8B, member 2 isoform a 
ATP8B4                0.136   ATPase class I type 8B member 4 
ATP8A2                0.131   ATPase, aminophospholipid transporter-like, Class I...
ATP8A1                0.130   ATPase, aminophospholipid transporter (APLT), class...
ATP8A1                0.130   ATPase, aminophospholipid transporter (APLT), class ...
ATP8B1                0.124   ATPase, class I, type 8B, member 1 
ATP11A                0.117   ATPase, class VI, type 11A isoform b 
ATP11A                0.117   ATPase, class VI, type 11A isoform a 
ATP11B                0.115   ATPase, class VI, type 11B 
ATP11C                0.115   ATPase, class VI, type 11C isoform b 
ATP11C                0.115   ATPase, class VI, type 11C isoform a 
ATP8B3                0.107   ATPase, class I, type 8B, member 3 
ATP9B                 0.085   ATPase, class II, type 9B 
ATP9A                 0.082   ATPase, class II, type 9A 
ATP8B2                0.070   ATPase, class I, type 8B, member 2 isoform b 
ATP2B4                0.025   plasma membrane calcium ATPase 4 isoform 4a 
ATP2B4                0.025   plasma membrane calcium ATPase 4 isoform 4b 
ATP2B1                0.019   plasma membrane calcium ATPase 1 isoform 1a 
ATP2B1                0.019   plasma membrane calcium ATPase 1 isoform 1b 
ATP2B3                0.019   plasma membrane calcium ATPase 3 isoform 3b 
ATP2B3                0.019   plasma membrane calcium ATPase 3 isoform 3a 
ATP2B2                0.019   plasma membrane calcium ATPase 2 isoform 2 
ATP2B2                0.019   plasma membrane calcium ATPase 2 isoform 1 
ATP13A2               0.017   ATPase type 13A2 isoform 2 
ATP13A2               0.017   ATPase type 13A2 isoform 1 
ATP13A5               0.017   ATPase type 13A5 
ATP13A4               0.015   ATPase type 13A4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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