Guide to the Human Genome
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Name: PSTK Sequence: fasta or formatted (348aa) NCBI GI: 224465209
Description:

phosphoseryl-tRNA kinase

Referenced in:

Selenium Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         33           2
 C cysteine            3.7         13           2
 D aspartate           4.3         15           2
 E glutamate           6.6         23           1
 F phenylalanine       3.4         12           1
 G glycine             4.9         17           1
 H histidine           1.7          6           1
 I isoleucine          4.6         16           2
 K lysine              5.7         20           1
 L leucine            11.2         39           3
 M methionine          2.9         10           1
 N asparagine          4.0         14           1
 P proline             5.2         18           2
 Q glutamine           5.7         20           2
 R arginine            6.9         24           2
 S serine              5.2         18           1
 T threonine           5.5         19           1
 V valine              4.0         14           2
 W tryptophan          2.0          7           1
 Y tyrosine            2.9         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphoseryl-tRNA kinase 
SLC6A9                0.012   solute carrier family 6 member 9 isoform 3 
SLC6A9                0.012   solute carrier family 6 member 9 isoform 2 
SLC6A9                0.012   solute carrier family 6 member 9 isoform 1 
HNRNPUL1              0.012   heterogeneous nuclear ribonucleoprotein U-like 1 iso...
HNRNPUL1              0.012   heterogeneous nuclear ribonucleoprotein U-like 1 iso...
OR4F3                 0.010   olfactory receptor, family 4, subfamily F, member 3 ...
OR4F29                0.010   olfactory receptor, family 4, subfamily F, member 2...
OR4F16                0.010   olfactory receptor, family 4, subfamily F, member 16...
OR4F21                0.010   olfactory receptor, family 4, subfamily F, member 21...
MYH14                 0.009   myosin, heavy chain 14 isoform 1 
MYH14                 0.009   myosin, heavy chain 14 isoform 2 
MYH14                 0.009   myosin, heavy chain 14 isoform 3 
ZNF654                0.009   zinc finger protein 654 
NUBP1                 0.007   nucleotide binding protein 1 
CHTF18                0.007   CTF18, chromosome transmission fidelity factor 18 ho...
MBOAT1                0.007   membrane bound O-acyltransferase domain containing ...
OR4F15                0.007   olfactory receptor, family 4, subfamily F, member 15...
THNSL1                0.007   threonine synthase-like 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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