LOC100288747 16347

Name: LOC100288747	Sequence: fasta or formatted (170aa)		NCBI GI: 239508884
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Other entries for this name: alt mRNA {170aa} PREDICTED: hypothetical protein XP_002342803
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.8 20 3 C cysteine 1.8 3 1 D aspartate 0.6 1 1 E glutamate 5.3 9 1 F phenylalanine 1.8 3 1 G glycine 14.1 24 3 H histidine 2.4 4 1 I isoleucine 0.6 1 1 K lysine 1.2 2 1 L leucine 8.8 15 2 M methionine 1.2 2 1 N asparagine 0.6 1 1 P proline 13.5 23 2 Q glutamine 6.5 11 1 R arginine 12.9 22 2 S serine 9.4 16 1 T threonine 3.5 6 1 V valine 1.2 2 1 W tryptophan 2.9 5 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC100292307 1.000 PREDICTED: hypothetical protein LOC100290778 1.000 PREDICTED: hypothetical protein XP_002346922 LOC100288747 1.000 PREDICTED: hypothetical protein XP_002342803 SH3BP1 0.057 SH3-domain binding protein 1 SAMD1 0.045 sterile alpha motif domain containing 1 FLJ37078 0.042 hypothetical protein LOC222183 TTLL10 0.039 tubulin tyrosine ligase-like family, member 10 isof... COL2A1 0.036 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.036 collagen, type II, alpha 1 isoform 2 precursor [Hom... FLJ31945 0.036 PREDICTED: hypothetical protein LOC100131091 0.036 PREDICTED: hypothetical protein LOC100131091 0.036 PREDICTED: hypothetical protein LOC100130360 0.036 PREDICTED: hypothetical protein SYN1 0.036 synapsin I isoform Ia SYN1 0.036 synapsin I isoform Ib LOC100127891 0.033 PREDICTED: hypothetical protein LOC100291839 0.033 PREDICTED: hypothetical protein XP_002345663 LOC100288992 0.033 PREDICTED: hypothetical protein LOC100288992 0.033 PREDICTED: hypothetical protein XP_002344247 RAVER1 0.030 RAVER1 LOC100291301 0.030 PREDICTED: hypothetical protein XP_002347724 SH3D20 0.030 SH3 domain containing 20 ATN1 0.030 atrophin-1 ATN1 0.030 atrophin-1 RPH3A 0.030 rabphilin 3A homolog isoform 1 RPH3A 0.030 rabphilin 3A homolog isoform 2 LOC100292782 0.027 PREDICTED: hypothetical protein LOC100290372 0.027 PREDICTED: hypothetical protein XP_002346788 LOC100288606 0.027 PREDICTED: hypothetical protein XP_002342652 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.