Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: OR5M9 Sequence: fasta or formatted (310aa) NCBI GI: 52317128
Description:

olfactory receptor, family 5, subfamily M, member 9

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         16           1
 C cysteine            3.5         11           1
 D aspartate           1.9          6           1
 E glutamate           3.5         11           2
 F phenylalanine       6.8         21           2
 G glycine             4.8         15           1
 H histidine           1.6          5           1
 I isoleucine          8.1         25           2
 K lysine              3.2         10           1
 L leucine            10.3         32           2
 M methionine          4.8         15           1
 N asparagine          3.5         11           1
 P proline             3.9         12           2
 Q glutamine           2.6          8           1
 R arginine            4.2         13           2
 S serine              7.4         23           2
 T threonine           7.1         22           2
 V valine             11.0         34           2
 W tryptophan          0.3          1           1
 Y tyrosine            6.1         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 5, subfamily M, member 9 ... 
OR5M3                 0.785   olfactory receptor, family 5, subfamily M, member 3 ...
OR5M8                 0.667   olfactory receptor, family 5, subfamily M, member 8 ...
OR5M10                0.580   olfactory receptor, family 5, subfamily M, member 10...
OR5M1                 0.571   olfactory receptor, family 5, subfamily M, member 1 ...
OR5M11                0.550   olfactory receptor, family 5, subfamily M, member 11...
OR8U9                 0.491   olfactory receptor, family 8, subfamily U, member 9 ...
OR5R1                 0.491   olfactory receptor, family 5, subfamily R, member 1 ...
OR8U8                 0.491   olfactory receptor, family 8, subfamily U, member 8 ...
OR8U1                 0.486   olfactory receptor, family 8, subfamily U, member 1 ...
OR5AR1                0.472   olfactory receptor, family 5, subfamily AR, member 1...
OR5F1                 0.471   olfactory receptor, family 5, subfamily F, member 1 ...
OR5AP2                0.469   olfactory receptor, family 5, subfamily AP, member 2...
OR8D1                 0.467   olfactory receptor, family 8, subfamily D, member 1 ...
OR5D18                0.466   olfactory receptor, family 5, subfamily D, member 18...
OR5I1                 0.464   olfactory receptor, family 5, subfamily I, member 1 [...
OR5B21                0.464   olfactory receptor, family 5, subfamily B, member 21...
OR8K3                 0.461   olfactory receptor, family 8, subfamily K, member 3 ...
OR8A1                 0.455   olfactory receptor, family 8, subfamily A, member 1 ...
OR8J3                 0.455   olfactory receptor, family 8, subfamily J, member 3 ...
OR5B12                0.455   olfactory receptor, family 5, subfamily B, member 12...
OR5B3                 0.450   olfactory receptor, family 5, subfamily B, member 3 ...
OR5L1                 0.449   olfactory receptor, family 5, subfamily L, member 1 ...
OR8B3                 0.447   olfactory receptor, family 8, subfamily B, member 3 ...
OR5AU1                0.447   olfactory receptor, family 5, subfamily AU, member 1...
OR8I2                 0.447   olfactory receptor, family 8, subfamily I, member 2 ...
OR8D2                 0.445   olfactory receptor, family 8, subfamily D, member 2 ...
OR5T1                 0.445   olfactory receptor, family 5, subfamily T, member 1 ...
OR5AS1                0.445   olfactory receptor, family 5, subfamily AS, member 1...
OR5A2                 0.444   olfactory receptor, family 5, subfamily A, member 2 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press