Guide to the Human Genome
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Name: POTEA Sequence: fasta or formatted (498aa) NCBI GI: 53828703
Description:

POTE ankyrin domain family, member A isoform 2

Referenced in:

Prostate

Other entries for this name:
alt prot [452aa] POTE ankyrin domain family, member A isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         32           3
 C cysteine            2.6         13           4
 D aspartate           6.4         32           2
 E glutamate           8.0         40           3
 F phenylalanine       2.6         13           1
 G glycine             5.8         29           2
 H histidine           3.6         18           2
 I isoleucine          3.6         18           2
 K lysine              8.0         40           3
 L leucine            10.6         53           3
 M methionine          2.8         14           1
 N asparagine          6.4         32           2
 P proline             3.6         18           1
 Q glutamine           5.4         27           2
 R arginine            4.4         22           2
 S serine              7.2         36           2
 T threonine           3.4         17           1
 V valine              5.6         28           2
 W tryptophan          1.0          5           2
 Y tyrosine            2.2         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   POTE ankyrin domain family, member A isoform 2 [Homo... 
POTEA                 0.891   POTE ankyrin domain family, member A isoform 1 [Homo...
LOC100287399          0.612   PREDICTED: hypothetical protein XP_002343353 
POTEC                 0.611   ANKRD26-like family B, member 2 
POTEB                 0.610   protein expressed in prostate, ovary, testis, and pl...
POTED                 0.609   pote protein 
LOC100288966          0.607   PREDICTED: hypothetical protein XP_002343914 isofor...
LOC100288966          0.606   PREDICTED: hypothetical protein XP_002343915 isofor...
POTEF                 0.605   prostate, ovary, testis expressed protein on chromo...
LOC653269             0.604   PREDICTED: similar to protein expressed in prostate...
LOC653781             0.604   PREDICTED: similar to protein expressed in prostate...
LOC653269             0.603   PREDICTED: similar to protein expressed in prostate,...
POTEE                 0.602   protein expressed in prostate, ovary, testis, and p...
ACTBL3                0.595   PREDICTED: actin, beta-like 3 
ACTBL3                0.595   PREDICTED: kappa-actin 
POTEH                 0.594   ANKRD26-like family C, member 3 
POTEG                 0.593   POTE ankyrin domain family, member G 
ACTBL3                0.592   PREDICTED: actin, beta-like 3 
P704P                 0.587   prostate-specific P704P 
ANKRD62               0.362   PREDICTED: ankyrin repeat domain 62 
ANKRD62               0.362   PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo...
ANKRD62               0.362   PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo...
ANKRD18B              0.230   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.230   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.229   PREDICTED: ankyrin repeat domain 18B 
ANKRD26               0.228   ankyrin repeat domain 26 
ANKRD18A              0.225   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.225   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.225   PREDICTED: ankyrin repeat domain 18A 
ANKRD20A4             0.221   ankyrin repeat domain 20 family, member A4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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