Guide to the Human Genome
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Name: POTEB Sequence: fasta or formatted (581aa) NCBI GI: 52856430
Description:

protein expressed in prostate, ovary, testis, and placenta 15

Referenced in:

Prostate

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         31           2
 C cysteine            3.8         22           2
 D aspartate           6.4         37           2
 E glutamate           9.3         54           3
 F phenylalanine       1.5          9           1
 G glycine             5.7         33           1
 H histidine           3.4         20           3
 I isoleucine          3.6         21           1
 K lysine              9.3         54           3
 L leucine            10.5         61           3
 M methionine          3.1         18           1
 N asparagine          6.0         35           1
 P proline             2.8         16           1
 Q glutamine           5.2         30           2
 R arginine            5.0         29           2
 S serine              8.1         47           2
 T threonine           3.8         22           1
 V valine              4.6         27           2
 W tryptophan          0.9          5           2
 Y tyrosine            1.7         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein expressed in prostate, ovary, testis, and pl... 
POTED                 0.961   pote protein 
LOC100288966          0.958   PREDICTED: hypothetical protein XP_002343914 isofor...
POTEC                 0.904   ANKRD26-like family B, member 2 
LOC100287399          0.896   PREDICTED: hypothetical protein XP_002343353 
LOC100288966          0.858   PREDICTED: hypothetical protein XP_002343915 isofor...
LOC653269             0.854   PREDICTED: similar to protein expressed in prostate...
POTEG                 0.773   POTE ankyrin domain family, member G 
P704P                 0.771   prostate-specific P704P 
POTEH                 0.761   ANKRD26-like family C, member 3 
ACTBL3                0.759   PREDICTED: actin, beta-like 3 
ACTBL3                0.756   PREDICTED: actin, beta-like 3 
ACTBL3                0.755   PREDICTED: kappa-actin 
LOC653269             0.736   PREDICTED: similar to protein expressed in prostate,...
POTEF                 0.731   prostate, ovary, testis expressed protein on chromo...
POTEE                 0.727   protein expressed in prostate, ovary, testis, and p...
LOC653781             0.658   PREDICTED: similar to protein expressed in prostate...
POTEA                 0.520   POTE ankyrin domain family, member A isoform 2 [Homo...
POTEA                 0.443   POTE ankyrin domain family, member A isoform 1 [Homo...
ANKRD62               0.242   PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo...
ANKRD62               0.240   PREDICTED: ankyrin repeat domain 62 
ANKRD62               0.240   PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo...
ANKRD20A3             0.199   ankyrin repeat domain 20 family, member A3 
ANKRD20A2             0.199   ankyrin repeat domain 20 family, member A2 
ANKRD20A1             0.199   ankyrin repeat domain 20 family, member A1 
ANKRD20A4             0.199   ankyrin repeat domain 20 family, member A4 
ANKRD20A5             0.192   PREDICTED: ankyrin repeat domain 20 family, member ...
ANKRD18B              0.192   PREDICTED: ankyrin repeat domain 18B 
ANKRD20A5             0.192   PREDICTED: ankyrin repeat domain 20 family, member ...
ANKRD18B              0.192   PREDICTED: ankyrin repeat domain 18B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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