Guide to the Human Genome
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Name: POTED Sequence: fasta or formatted (584aa) NCBI GI: 153792284
Description:

pote protein

Referenced in:

Prostate

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         29           2
 C cysteine            3.8         22           2
 D aspartate           6.2         36           2
 E glutamate           9.6         56           3
 F phenylalanine       1.5          9           1
 G glycine             5.5         32           1
 H histidine           3.4         20           3
 I isoleucine          3.8         22           1
 K lysine              8.9         52           3
 L leucine            10.4         61           3
 M methionine          3.4         20           1
 N asparagine          6.2         36           1
 P proline             2.9         17           1
 Q glutamine           5.0         29           2
 R arginine            5.7         33           2
 S serine              7.9         46           2
 T threonine           3.8         22           1
 V valine              4.6         27           2
 W tryptophan          0.9          5           2
 Y tyrosine            1.7         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pote protein 
LOC100288966          0.996   PREDICTED: hypothetical protein XP_002343914 isofor...
POTEB                 0.955   protein expressed in prostate, ovary, testis, and pl...
POTEC                 0.895   ANKRD26-like family B, member 2 
LOC100288966          0.888   PREDICTED: hypothetical protein XP_002343915 isofor...
LOC100287399          0.857   PREDICTED: hypothetical protein XP_002343353 
LOC653269             0.845   PREDICTED: similar to protein expressed in prostate...
POTEG                 0.757   POTE ankyrin domain family, member G 
P704P                 0.756   prostate-specific P704P 
ACTBL3                0.755   PREDICTED: actin, beta-like 3 
ACTBL3                0.751   PREDICTED: actin, beta-like 3 
ACTBL3                0.750   PREDICTED: kappa-actin 
POTEH                 0.743   ANKRD26-like family C, member 3 
LOC653269             0.720   PREDICTED: similar to protein expressed in prostate,...
POTEF                 0.717   prostate, ovary, testis expressed protein on chromo...
POTEE                 0.709   protein expressed in prostate, ovary, testis, and p...
LOC653781             0.647   PREDICTED: similar to protein expressed in prostate...
POTEA                 0.516   POTE ankyrin domain family, member A isoform 2 [Homo...
POTEA                 0.440   POTE ankyrin domain family, member A isoform 1 [Homo...
ANKRD62               0.236   PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo...
ANKRD62               0.235   PREDICTED: ankyrin repeat domain 62 
ANKRD62               0.235   PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo...
ANKRD20A3             0.195   ankyrin repeat domain 20 family, member A3 
ANKRD20A2             0.195   ankyrin repeat domain 20 family, member A2 
ANKRD20A1             0.195   ankyrin repeat domain 20 family, member A1 
ANKRD20A4             0.195   ankyrin repeat domain 20 family, member A4 
ANKRD20A5             0.188   PREDICTED: ankyrin repeat domain 20 family, member ...
ANKRD20A5             0.188   PREDICTED: ankyrin repeat domain 20 family, member ...
ANKRD18B              0.185   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.185   PREDICTED: ankyrin repeat domain 18B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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