Guide to the Human Genome
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Name: LOC100288966 Sequence: fasta or formatted (584aa) NCBI GI: 239747114
Description:

PREDICTED: hypothetical protein XP_002343914 isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {551aa} PREDICTED: hypothetical protein XP_002343915 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         29           2
 C cysteine            3.8         22           2
 D aspartate           6.2         36           2
 E glutamate           9.6         56           3
 F phenylalanine       1.5          9           1
 G glycine             5.3         31           1
 H histidine           3.4         20           3
 I isoleucine          3.6         21           1
 K lysine              8.9         52           3
 L leucine            10.4         61           3
 M methionine          3.3         19           1
 N asparagine          6.2         36           1
 P proline             2.9         17           1
 Q glutamine           5.0         29           2
 R arginine            5.7         33           2
 S serine              8.0         47           2
 T threonine           3.8         22           1
 V valine              5.0         29           2
 W tryptophan          0.9          5           2
 Y tyrosine            1.7         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein XP_002343914 isofor... 
POTED                 0.997   pote protein 
POTEB                 0.954   protein expressed in prostate, ovary, testis, and pl...
POTEC                 0.894   ANKRD26-like family B, member 2 
LOC100288966          0.892   PREDICTED: hypothetical protein XP_002343915 isofor...
LOC100287399          0.856   PREDICTED: hypothetical protein XP_002343353 
LOC653269             0.843   PREDICTED: similar to protein expressed in prostate...
POTEG                 0.757   POTE ankyrin domain family, member G 
P704P                 0.755   prostate-specific P704P 
ACTBL3                0.753   PREDICTED: actin, beta-like 3 
ACTBL3                0.750   PREDICTED: actin, beta-like 3 
ACTBL3                0.749   PREDICTED: kappa-actin 
POTEH                 0.742   ANKRD26-like family C, member 3 
POTEF                 0.720   prostate, ovary, testis expressed protein on chromo...
LOC653269             0.719   PREDICTED: similar to protein expressed in prostate,...
POTEE                 0.709   protein expressed in prostate, ovary, testis, and p...
LOC653781             0.646   PREDICTED: similar to protein expressed in prostate...
POTEA                 0.515   POTE ankyrin domain family, member A isoform 2 [Homo...
POTEA                 0.439   POTE ankyrin domain family, member A isoform 1 [Homo...
ANKRD62               0.237   PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo...
ANKRD62               0.235   PREDICTED: ankyrin repeat domain 62 
ANKRD62               0.235   PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo...
ANKRD20A3             0.196   ankyrin repeat domain 20 family, member A3 
ANKRD20A2             0.196   ankyrin repeat domain 20 family, member A2 
ANKRD20A1             0.196   ankyrin repeat domain 20 family, member A1 
ANKRD20A4             0.196   ankyrin repeat domain 20 family, member A4 
ANKRD20A5             0.188   PREDICTED: ankyrin repeat domain 20 family, member ...
ANKRD20A5             0.188   PREDICTED: ankyrin repeat domain 20 family, member ...
ANKRD18B              0.186   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.186   PREDICTED: ankyrin repeat domain 18B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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